RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 Q8N814 137 aa9.52□□□□□ -0.89
RNF43-208ENST00000584437 ZFHX2Q9C0A1 2572 aaPredicted RBP9.51□□□□□ -0.89
RNF43-208ENST00000584437 SMIM1B2RUZ4 78 aa9.51□□□□□ -0.89
RNF43-208ENST00000584437 FAM30AQ9NZY2 134 aa9.51□□□□□ -0.89
RNF43-208ENST00000584437 NUP210LQ5VU65 1888 aa9.51□□□□□ -0.89
RNF43-208ENST00000584437 C10orf99Q6UWK7 81 aa9.5□□□□□ -0.89
RNF43-208ENST00000584437 A0A0J9YWU9 116 aa9.5□□□□□ -0.89
RNF43-208ENST00000584437 LOC100131303A0A0U1RQF7 123 aa9.5□□□□□ -0.89
RNF43-208ENST00000584437 ZNF702PQ9H963 129 aa9.5□□□□□ -0.89
RNF43-208ENST00000584437 TSPEAR-AS2P59090 65 aa9.5□□□□□ -0.89
RNF43-208ENST00000584437 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.5□□□□□ -0.89
RNF43-208ENST00000584437 C19orf84I3L1E1 186 aa9.49□□□□□ -0.89
RNF43-208ENST00000584437 PRORYQ9H606 182 aa9.49□□□□□ -0.89
RNF43-208ENST00000584437 A0A087WVE0 104 aa9.49□□□□□ -0.89
RNF43-208ENST00000584437 A0A096LNJ9 63 aa9.49□□□□□ -0.89
RNF43-208ENST00000584437 LOC107984640A0A0U1RRK4 108 aa9.49□□□□□ -0.89
RNF43-208ENST00000584437 PRYO14603 147 aa9.48□□□□□ -0.89
RNF43-208ENST00000584437 CSPG4Q6UVK1 2322 aa9.48□□□□□ -0.89
RNF43-208ENST00000584437 AMELXQ99217 191 aa9.48□□□□□ -0.89
RNF43-208ENST00000584437 CYSRT1A8MQ03 144 aa9.47□□□□□ -0.89
RNF43-208ENST00000584437 LINC00482Q8N8I6 264 aa9.47□□□□□ -0.89
RNF43-208ENST00000584437 C2CD3Q4AC94 2353 aa9.47□□□□□ -0.89
RNF43-208ENST00000584437 TRAV10A0A0B4J240 114 aa9.47□□□□□ -0.89
RNF43-208ENST00000584437 CSDC2Q9Y534 153 aaKnown RBP9.47□□□□□ -0.89
RNF43-208ENST00000584437 CHCHD7Q9BUK0 85 aa9.46□□□□□ -0.89
RNF43-208ENST00000584437 CELA1Q9UNI1 258 aa9.46□□□□□ -0.89
RNF43-208ENST00000584437 PMAIP1Q13794 54 aa9.46□□□□□ -0.89
RNF43-208ENST00000584437 TANC2Q9HCD6 1990 aa9.46□□□□□ -0.89
RNF43-208ENST00000584437 EGFEM1PQ0D2K5 195 aa9.46□□□□□ -0.9
RNF43-208ENST00000584437 KPRPQ5T749 579 aaPredicted RBP9.46□□□□□ -0.9
RNF43-208ENST00000584437 WFDC10AQ9H1F0 79 aa9.46□□□□□ -0.9
RNF43-208ENST00000584437 ATG2AQ2TAZ0 1938 aa9.46□□□□□ -0.9
RNF43-208ENST00000584437 PPDPFQ9H3Y8 114 aa9.45□□□□□ -0.9
RNF43-208ENST00000584437 PCDH15Q96QU1 1955 aa9.45□□□□□ -0.9
RNF43-208ENST00000584437 IGLV2-18A0A075B6J9 118 aa9.45□□□□□ -0.9
RNF43-208ENST00000584437 A0A087WYN8 130 aa9.45□□□□□ -0.9
RNF43-208ENST00000584437 LTBP2Q14767 1821 aa9.45□□□□□ -0.9
RNF43-208ENST00000584437 ADAMTSL4-AS1Q5T5F5 129 aa9.45□□□□□ -0.9
RNF43-208ENST00000584437 SOSTDC1Q6X4U4 206 aa9.45□□□□□ -0.9
RNF43-208ENST00000584437 Q8N3U1 123 aa9.45□□□□□ -0.9
RNF43-208ENST00000584437 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.44□□□□□ -0.9
RNF43-208ENST00000584437 LINC00208Q96KT6 92 aa9.43□□□□□ -0.9
RNF43-208ENST00000584437 COL4A4P53420 1690 aaPredicted RBP9.43□□□□□ -0.9
RNF43-208ENST00000584437 TRBV7-7A0A0K0K1E9 115 aa9.43□□□□□ -0.9
RNF43-208ENST00000584437 C1orf137Q5JT78 98 aa9.43□□□□□ -0.9
RNF43-208ENST00000584437 SPINK6Q6UWN8 80 aa9.43□□□□□ -0.9
RNF43-208ENST00000584437 C7orf33Q8WU49 177 aa9.43□□□□□ -0.9
RNF43-208ENST00000584437 ARHGAP32A7KAX9 2087 aa9.43□□□□□ -0.9
RNF43-208ENST00000584437 RPL37AP8A6NKH3 93 aa9.43□□□□□ -0.9
RNF43-208ENST00000584437 BDP1A6H8Y1 2624 aa9.42□□□□□ -0.9
RNF43-208ENST00000584437 PRM2P04554 102 aa9.42□□□□□ -0.9
RNF43-208ENST00000584437 UNQ6190/PRO20217Q6UXQ8 127 aa9.42□□□□□ -0.9
RNF43-208ENST00000584437 TRBV10-3A0A0K0K1G6 114 aa9.42□□□□□ -0.9
RNF43-208ENST00000584437 CACNA1AO00555 2505 aa9.42□□□□□ -0.9
RNF43-208ENST00000584437 COX6A2Q02221 97 aa9.42□□□□□ -0.9
RNF43-208ENST00000584437 TECTAO75443 2155 aa9.42□□□□□ -0.9
RNF43-208ENST00000584437 DSCAMO60469 2012 aa9.41□□□□□ -0.9
RNF43-208ENST00000584437 CDIP1Q9H305 208 aa9.41□□□□□ -0.9
RNF43-208ENST00000584437 MUC6Q6W4X9 2439 aa9.41□□□□□ -0.9
RNF43-208ENST00000584437 C10orf25Q5T742 122 aa9.4□□□□□ -0.9
RNF43-208ENST00000584437 EML5Q05BV3 1969 aa9.4□□□□□ -0.9
RNF43-208ENST00000584437 LRCOL1A6NCL2 159 aa9.4□□□□□ -0.9
RNF43-208ENST00000584437 LINC00474Q9P2X8 69 aa9.4□□□□□ -0.9
RNF43-208ENST00000584437 LINC01006Q8NI28 216 aa9.39□□□□□ -0.91
RNF43-208ENST00000584437 SONP18583 2426 aaKnown RBP9.39□□□□□ -0.91
RNF43-208ENST00000584437 NOTCH2Q04721 2471 aa9.39□□□□□ -0.91
RNF43-208ENST00000584437 BRI3O95415 125 aa9.39□□□□□ -0.91
RNF43-208ENST00000584437 NAV3Q8IVL0 2385 aa9.39□□□□□ -0.91
RNF43-208ENST00000584437 PLAC8L1A1L4L8 177 aa9.39□□□□□ -0.91
RNF43-208ENST00000584437 ZNF843Q8N446 348 aa9.38□□□□□ -0.91
RNF43-208ENST00000584437 TMEM254Q8TBM7 123 aa9.38□□□□□ -0.91
RNF43-208ENST00000584437 TTC28Q96AY4 2481 aa9.38□□□□□ -0.91
RNF43-208ENST00000584437 PTPN13Q12923 2485 aa9.38□□□□□ -0.91
RNF43-208ENST00000584437 C18orf65Q6ZTR6 163 aa9.38□□□□□ -0.91
RNF43-208ENST00000584437 ODF3L2Q3SX64 289 aa9.38□□□□□ -0.91
RNF43-208ENST00000584437 SHISA2Q6UWI4 295 aa9.38□□□□□ -0.91
RNF43-208ENST00000584437 LINC00846Q9NV44 126 aa9.37□□□□□ -0.91
RNF43-208ENST00000584437 ZNF580Q9UK33 172 aa9.37□□□□□ -0.91
RNF43-208ENST00000584437 BEAN1Q3B7T3 259 aa9.36□□□□□ -0.91
RNF43-208ENST00000584437 Q6ZVQ6 151 aa9.36□□□□□ -0.91
RNF43-208ENST00000584437 LINC01561Q8N1V8 128 aa9.36□□□□□ -0.91
RNF43-208ENST00000584437 IGLV4-60A0A075B6I1 120 aa9.36□□□□□ -0.91
RNF43-208ENST00000584437 IGLV9-49A0A0B4J1Y8 123 aa9.36□□□□□ -0.91
RNF43-208ENST00000584437 F8WDY8 70 aa9.36□□□□□ -0.91
RNF43-208ENST00000584437 C9orf116Q5BN46 136 aaPredicted RBP9.35□□□□□ -0.91
RNF43-208ENST00000584437 LINC00575Q6W349 94 aa9.35□□□□□ -0.91
RNF43-208ENST00000584437 LINC01546A6NGU7 62 aa9.35□□□□□ -0.91
RNF43-208ENST00000584437 TRBV7-6A0A0J9YX20 115 aa9.34□□□□□ -0.91
RNF43-208ENST00000584437 LINC01547P58512 204 aaPredicted RBP9.34□□□□□ -0.91
RNF43-208ENST00000584437 PRR3P79522 188 aaKnown RBP9.34□□□□□ -0.91
RNF43-208ENST00000584437 CXCL6P80162 114 aa9.34□□□□□ -0.91
RNF43-208ENST00000584437 ESRGQ1W209 222 aa9.34□□□□□ -0.91
RNF43-208ENST00000584437 REG3GQ6UW15 175 aa9.33□□□□□ -0.92
RNF43-208ENST00000584437 CUL9Q8IWT3 2517 aa9.33□□□□□ -0.92
RNF43-208ENST00000584437 PRO0628Q9UI54 55 aa9.33□□□□□ -0.92
RNF43-208ENST00000584437 IGHV4-30-4P0DP06 118 aa9.33□□□□□ -0.92
RNF43-208ENST00000584437 A0A1B0GUV1 79 aa9.33□□□□□ -0.92
RNF43-208ENST00000584437 C10orf142B7Z368 130 aa9.32□□□□□ -0.92
RNF43-208ENST00000584437 PSPHP1O15172 72 aa9.32□□□□□ -0.92
RNF43-208ENST00000584437 CRYGAP11844 174 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms