RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 COX7A2LO14548 114 aa6.99□□□□□ -1.29
CCDC47-206ENST00000584112 SYCNQ0VAF6 134 aa6.99□□□□□ -1.29
CCDC47-206ENST00000584112 LINC00526Q96FQ7 95 aa6.99□□□□□ -1.29
CCDC47-206ENST00000584112 TRAV13-1A0A0B4J241 112 aa6.98□□□□□ -1.29
CCDC47-206ENST00000584112 TNFRSF6BO95407 300 aa6.98□□□□□ -1.29
CCDC47-206ENST00000584112 APOMO95445 188 aa6.98□□□□□ -1.29
CCDC47-206ENST00000584112 PPBPP02775 128 aa6.98□□□□□ -1.29
CCDC47-206ENST00000584112 RNASE13Q5GAN3 156 aaKnown RBP6.98□□□□□ -1.29
CCDC47-206ENST00000584112 MRPL54Q6P161 138 aaKnown RBP6.98□□□□□ -1.29
CCDC47-206ENST00000584112 SMIM2Q9BVW6 85 aa6.98□□□□□ -1.29
CCDC47-206ENST00000584112 A0A1B0GXF2 115 aa6.97□□□□□ -1.29
CCDC47-206ENST00000584112 D6R8Y8 96 aa6.97□□□□□ -1.29
CCDC47-206ENST00000584112 Q6ZUT4 128 aa6.97□□□□□ -1.29
CCDC47-206ENST00000584112 IGLV4-69A0A075B6H9 119 aa6.96□□□□□ -1.3
CCDC47-206ENST00000584112 LOC107984640A0A0U1RRK4 108 aa6.96□□□□□ -1.3
CCDC47-206ENST00000584112 PRR3P79522 188 aaKnown RBP6.96□□□□□ -1.3
CCDC47-206ENST00000584112 ATP5L2Q7Z4Y8 100 aa6.96□□□□□ -1.3
CCDC47-206ENST00000584112 C2orf48Q96LS8 159 aa6.96□□□□□ -1.3
CCDC47-206ENST00000584112 SPANXA1Q9NS26 97 aa6.96□□□□□ -1.3
CCDC47-206ENST00000584112 PTTG1IPP53801 180 aa6.95□□□□□ -1.3
CCDC47-206ENST00000584112 RPL39P62891 51 aaKnown RBP6.95□□□□□ -1.3
CCDC47-206ENST00000584112 ORMDL3Q8N138 153 aa6.95□□□□□ -1.3
CCDC47-206ENST00000584112 CAMK2N2Q96S95 79 aa6.95□□□□□ -1.3
CCDC47-206ENST00000584112 NPYP01303 97 aa6.94□□□□□ -1.3
CCDC47-206ENST00000584112 MRPS36P82909 103 aaKnown RBP6.94□□□□□ -1.3
CCDC47-206ENST00000584112 C5orf38Q86SI9 138 aa6.94□□□□□ -1.3
CCDC47-206ENST00000584112 OR10D4PQ8NGN7 298 aa6.94□□□□□ -1.3
CCDC47-206ENST00000584112 RAB5AP20339 215 aa6.93□□□□□ -1.3
CCDC47-206ENST00000584112 SPAG11BQ08648 103 aa6.93□□□□□ -1.3
CCDC47-206ENST00000584112 PNRC1Q12796 327 aaPredicted RBP6.93□□□□□ -1.3
CCDC47-206ENST00000584112 GAGE2BQ13066 116 aa6.93□□□□□ -1.3
CCDC47-206ENST00000584112 TMEM136Q6ZRR5 245 aa6.93□□□□□ -1.3
CCDC47-206ENST00000584112 PRELID3AQ96N28 172 aa6.93□□□□□ -1.3
CCDC47-206ENST00000584112 IFITM10A6NMD0 228 aa6.92□□□□□ -1.3
CCDC47-206ENST00000584112 F8WDY8 70 aa6.92□□□□□ -1.3
CCDC47-206ENST00000584112 IFI27P40305 119 aaPredicted RBP6.92□□□□□ -1.3
CCDC47-206ENST00000584112 RAB14P61106 215 aa6.92□□□□□ -1.3
CCDC47-206ENST00000584112 Q6ZRP5 223 aa6.92□□□□□ -1.3
CCDC47-206ENST00000584112 LAMTOR2Q9Y2Q5 125 aa6.92□□□□□ -1.3
CCDC47-206ENST00000584112 IGHV3OR16-9A0A0B4J2B5 98 aa6.91□□□□□ -1.3
CCDC47-206ENST00000584112 MT-ND4LP03901 98 aa6.91□□□□□ -1.3
CCDC47-206ENST00000584112 RPL18AQ02543 176 aaKnown RBP6.91□□□□□ -1.3
CCDC47-206ENST00000584112 RNF151Q2KHN1 245 aa6.91□□□□□ -1.3
CCDC47-206ENST00000584112 ORAOV1Q8WV07 137 aa6.91□□□□□ -1.3
CCDC47-206ENST00000584112 FAM104AQ969W3 186 aa6.91□□□□□ -1.3
CCDC47-206ENST00000584112 PYGO1Q9Y3Y4 419 aa6.91□□□□□ -1.3
CCDC47-206ENST00000584112 TGIF2-C20orf24A0A0A6YYL0 155 aa6.9□□□□□ -1.3
CCDC47-206ENST00000584112 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.9□□□□□ -1.3
CCDC47-206ENST00000584112 REG3GQ6UW15 175 aa6.9□□□□□ -1.3
CCDC47-206ENST00000584112 SPINK6Q6UWN8 80 aa6.9□□□□□ -1.3
CCDC47-206ENST00000584112 IMMP2LQ96T52 175 aa6.9□□□□□ -1.3
CCDC47-206ENST00000584112 OPRPNQ99935 248 aaPredicted RBP6.9□□□□□ -1.3
CCDC47-206ENST00000584112 MAP1LC3AQ9H492 121 aa6.9□□□□□ -1.3
CCDC47-206ENST00000584112 MRPL35Q9NZE8 188 aaKnown RBP6.9□□□□□ -1.3
CCDC47-206ENST00000584112 PRSS47A8MTI9 375 aa6.89□□□□□ -1.31
CCDC47-206ENST00000584112 NDUFA1O15239 70 aa6.89□□□□□ -1.31
CCDC47-206ENST00000584112 TMEM141Q96I45 108 aa6.89□□□□□ -1.31
CCDC47-206ENST00000584112 LINC01600Q96MT4 127 aa6.89□□□□□ -1.31
CCDC47-206ENST00000584112 A0A1W2PNN7 141 aa6.88□□□□□ -1.31
CCDC47-206ENST00000584112 C9orf116Q5BN46 136 aaPredicted RBP6.88□□□□□ -1.31
CCDC47-206ENST00000584112 CYSLTR1Q9Y271 337 aa6.88□□□□□ -1.31
CCDC47-206ENST00000584112 IGLV4-3A0A075B6K6 122 aa6.87□□□□□ -1.31
CCDC47-206ENST00000584112 A0A087WZ39 114 aa6.87□□□□□ -1.31
CCDC47-206ENST00000584112 A0A0J9YXV3 536 aa6.87□□□□□ -1.31
CCDC47-206ENST00000584112 LOC389332A0A1B0GUA5 103 aa6.87□□□□□ -1.31
CCDC47-206ENST00000584112 K7EMI3 77 aa6.87□□□□□ -1.31
CCDC47-206ENST00000584112 ANKRD39Q53RE8 183 aa6.87□□□□□ -1.31
CCDC47-206ENST00000584112 Q6ZN92 141 aa6.87□□□□□ -1.31
CCDC47-206ENST00000584112 TEX43Q6ZNM6 134 aa6.87□□□□□ -1.31
CCDC47-206ENST00000584112 Q8N8P6 123 aa6.87□□□□□ -1.31
CCDC47-206ENST00000584112 C2orf88Q9BSF0 95 aa6.87□□□□□ -1.31
CCDC47-206ENST00000584112 MT-ND6P03923 174 aa6.86□□□□□ -1.31
CCDC47-206ENST00000584112 TLX1NBP0CAT3 122 aa6.86□□□□□ -1.31
CCDC47-206ENST00000584112 SRSF9Q13242 221 aaKnown RBP eCLIP6.86□□□□□ -1.31
CCDC47-206ENST00000584112 ORMDL2Q53FV1 153 aa6.86□□□□□ -1.31
CCDC47-206ENST00000584112 LINC00242Q5T6M2 205 aa6.86□□□□□ -1.31
CCDC47-206ENST00000584112 NPSP0C0P6 89 aa6.85□□□□□ -1.31
CCDC47-206ENST00000584112 C2orf66Q6UXQ4 117 aa6.85□□□□□ -1.31
CCDC47-206ENST00000584112 UNQ6190/PRO20217Q6UXQ8 127 aa6.85□□□□□ -1.31
CCDC47-206ENST00000584112 LINC01561Q8N1V8 128 aa6.85□□□□□ -1.31
CCDC47-206ENST00000584112 PSORS1C2Q9UIG4 136 aa6.85□□□□□ -1.31
CCDC47-206ENST00000584112 TRBV30A0A0K0K1B3 111 aa6.84□□□□□ -1.31
CCDC47-206ENST00000584112 G0S2P27469 103 aa6.84□□□□□ -1.31
CCDC47-206ENST00000584112 UBE2D1P51668 147 aa6.84□□□□□ -1.31
CCDC47-206ENST00000584112 CLLU1Q5K131 121 aa6.84□□□□□ -1.31
CCDC47-206ENST00000584112 C10orf25Q5T742 122 aa6.84□□□□□ -1.31
CCDC47-206ENST00000584112 CTDSP1Q9GZU7 261 aa6.84□□□□□ -1.31
CCDC47-206ENST00000584112 VCX2Q9H322 139 aa6.84□□□□□ -1.31
CCDC47-206ENST00000584112 NXT2Q9NPJ8 142 aaKnown RBP6.84□□□□□ -1.31
CCDC47-206ENST00000584112 C6orf48Q9UBA6 75 aa6.84□□□□□ -1.31
CCDC47-206ENST00000584112 KIAA0087Q14695 138 aa6.83□□□□□ -1.32
CCDC47-206ENST00000584112 C1orf137Q5JT78 98 aa6.83□□□□□ -1.32
CCDC47-206ENST00000584112 PAPPA-AS1Q5QFB9 102 aa6.83□□□□□ -1.32
CCDC47-206ENST00000584112 PHF5AQ7RTV0 110 aaKnown RBP6.83□□□□□ -1.32
CCDC47-206ENST00000584112 PACRGQ96M98 296 aaPredicted RBP6.83□□□□□ -1.32
CCDC47-206ENST00000584112 AMELXQ99217 191 aa6.83□□□□□ -1.32
CCDC47-206ENST00000584112 KRTAP10-8P60410 259 aa6.82□□□□□ -1.32
CCDC47-206ENST00000584112 GAGE2EQ4V326 116 aa6.82□□□□□ -1.32
CCDC47-206ENST00000584112 UQCC3Q6UW78 93 aa6.82□□□□□ -1.32
CCDC47-206ENST00000584112 LINC00173Q6ZV60 143 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms