RNA–Protein interactions for RNA: ENST00000583569.5

NUP85-222, Transcript of nucleoporin 85, human

TSL 5

Gene NUP85, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-222	ENST00000583569	EFCAB10	A6NFE3	127 aa		0.83	□□□□□ -2.28
NUP85-222	ENST00000583569	PHGR1	C9JFL3	82 aa		0.83	□□□□□ -2.28
NUP85-222	ENST00000583569	LY6G6C	O95867	125 aa		0.83	□□□□□ -2.28
NUP85-222	ENST00000583569	ASIP	P42127	132 aa		0.83	□□□□□ -2.28
NUP85-222	ENST00000583569	NPC2	P61916	151 aa		0.83	□□□□□ -2.28
NUP85-222	ENST00000583569	SPTSSB	Q8NFR3	76 aa		0.83	□□□□□ -2.28
NUP85-222	ENST00000583569	DNAH10	Q8IVF4	4471 aa		0.83	□□□□□ -2.28
NUP85-222	ENST00000583569	ZGRF1	Q86YA3	2104 aa		0.83	□□□□□ -2.28
NUP85-222	ENST00000583569	MYH13	Q9UKX3	1938 aa		0.83	□□□□□ -2.28
NUP85-222	ENST00000583569	ROCK2	O75116	1388 aa	Known RBP	0.83	□□□□□ -2.28
NUP85-222	ENST00000583569	MAGI2	Q86UL8	1455 aa		0.82	□□□□□ -2.28
NUP85-222	ENST00000583569	POLR1A	O95602	1720 aa	Predicted RBP	0.82	□□□□□ -2.28
NUP85-222	ENST00000583569	TEX49	A0A1B0GTD5	131 aa		0.82	□□□□□ -2.28
NUP85-222	ENST00000583569	NDUFB6	O95139	128 aa		0.82	□□□□□ -2.28
NUP85-222	ENST00000583569	SLC48A1	Q6P1K1	146 aa		0.82	□□□□□ -2.28
NUP85-222	ENST00000583569	RPRM	Q9NS64	109 aa		0.82	□□□□□ -2.28
NUP85-222	ENST00000583569	COA4	Q9NYJ1	87 aa		0.82	□□□□□ -2.28
NUP85-222	ENST00000583569	NIN	Q8N4C6	2090 aa		0.82	□□□□□ -2.28
NUP85-222	ENST00000583569	KNL1	Q8NG31	2342 aa		0.81	□□□□□ -2.28
NUP85-222	ENST00000583569	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	0.81	□□□□□ -2.28
NUP85-222	ENST00000583569	ARHGEF12	Q9NZN5	1544 aa		0.81	□□□□□ -2.28
NUP85-222	ENST00000583569	C9orf116	Q5BN46	136 aa	Predicted RBP	0.81	□□□□□ -2.28
NUP85-222	ENST00000583569	C10orf82	Q8WW14	230 aa		0.81	□□□□□ -2.28
NUP85-222	ENST00000583569	C1orf54	Q8WWF1	131 aa		0.81	□□□□□ -2.28
NUP85-222	ENST00000583569	MYH6	P13533	1939 aa		0.81	□□□□□ -2.28
NUP85-222	ENST00000583569	ZNF831	Q5JPB2	1677 aa		0.81	□□□□□ -2.28
NUP85-222	ENST00000583569	GOLGA3	Q08378	1498 aa		0.8	□□□□□ -2.28
NUP85-222	ENST00000583569	ABCA6	Q8N139	1617 aa		0.8	□□□□□ -2.28
NUP85-222	ENST00000583569	LOC100130705	A0A1B0GUX0	176 aa		0.8	□□□□□ -2.28
NUP85-222	ENST00000583569	KLKP1	Q107X0	134 aa		0.8	□□□□□ -2.28
NUP85-222	ENST00000583569	C6orf52	Q5T4I8	152 aa		0.8	□□□□□ -2.28
NUP85-222	ENST00000583569	NDUFA11	Q86Y39	141 aa		0.8	□□□□□ -2.28
NUP85-222	ENST00000583569	C20orf197	Q8N268	126 aa		0.8	□□□□□ -2.28
NUP85-222	ENST00000583569	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	0.8	□□□□□ -2.28
NUP85-222	ENST00000583569	COPS9	Q8WXC6	57 aa		0.8	□□□□□ -2.28
NUP85-222	ENST00000583569	AGPAT4-IT1	Q9H0P7	198 aa		0.8	□□□□□ -2.28
NUP85-222	ENST00000583569	BET1L	Q9NYM9	111 aa		0.8	□□□□□ -2.28
NUP85-222	ENST00000583569	TMEM2	Q9UHN6	1383 aa		0.8	□□□□□ -2.28
NUP85-222	ENST00000583569	MED12	Q93074	2177 aa		0.8	□□□□□ -2.28
NUP85-222	ENST00000583569	LAMA4	Q16363	1823 aa		0.8	□□□□□ -2.28
NUP85-222	ENST00000583569	NCOA3	Q9Y6Q9	1424 aa		0.8	□□□□□ -2.28
NUP85-222	ENST00000583569	FANCA	O15360	1455 aa		0.8	□□□□□ -2.28
NUP85-222	ENST00000583569	C1orf167	Q5SNV9	1468 aa		0.8	□□□□□ -2.28
NUP85-222	ENST00000583569		A0A0G2JMZ2	1700 aa		0.79	□□□□□ -2.28
NUP85-222	ENST00000583569	ELOF1	P60002	83 aa	Known RBP	0.79	□□□□□ -2.28
NUP85-222	ENST00000583569	RBM3	P98179	157 aa	Known RBP	0.79	□□□□□ -2.28
NUP85-222	ENST00000583569	PPP1R1C	Q8WVI7	109 aa		0.79	□□□□□ -2.28
NUP85-222	ENST00000583569	TMEM14B	Q9NUH8	114 aa		0.79	□□□□□ -2.28
NUP85-222	ENST00000583569	ATG2A	Q2TAZ0	1938 aa		0.79	□□□□□ -2.28
NUP85-222	ENST00000583569	MYOM3	Q5VTT5	1437 aa		0.79	□□□□□ -2.28
NUP85-222	ENST00000583569	DLEC1	Q9Y238	1755 aa		0.78	□□□□□ -2.28
NUP85-222	ENST00000583569	DLEU1	O43261	78 aa		0.78	□□□□□ -2.28
NUP85-222	ENST00000583569	SNAPC5	O75971	98 aa		0.78	□□□□□ -2.28
NUP85-222	ENST00000583569	APOD	P05090	189 aa		0.78	□□□□□ -2.28
NUP85-222	ENST00000583569	AKAIN1	P0CW23	69 aa		0.78	□□□□□ -2.28
NUP85-222	ENST00000583569	CBLN1	P23435	193 aa		0.78	□□□□□ -2.28
NUP85-222	ENST00000583569	ZNF137P	P52743	207 aa		0.78	□□□□□ -2.28
NUP85-222	ENST00000583569	KRTAP19-6	Q3LI70	58 aa		0.78	□□□□□ -2.28
NUP85-222	ENST00000583569	SPINK9	Q5DT21	86 aa		0.78	□□□□□ -2.28
NUP85-222	ENST00000583569	C10orf99	Q6UWK7	81 aa		0.78	□□□□□ -2.28
NUP85-222	ENST00000583569	C4orf33	Q8N1A6	199 aa		0.78	□□□□□ -2.28
NUP85-222	ENST00000583569	LSM10	Q969L4	123 aa	Known RBP	0.78	□□□□□ -2.28
NUP85-222	ENST00000583569	DSCR8	Q96T75	97 aa		0.78	□□□□□ -2.28
NUP85-222	ENST00000583569	RERGL	Q9H628	205 aa		0.78	□□□□□ -2.28
NUP85-222	ENST00000583569	ASCC3	Q8N3C0	2202 aa	Known RBP	0.78	□□□□□ -2.28
NUP85-222	ENST00000583569	SMG6	Q86US8	1419 aa	Known RBP	0.78	□□□□□ -2.28
NUP85-222	ENST00000583569	ERVK-7	P63135	1459 aa		0.78	□□□□□ -2.28
NUP85-222	ENST00000583569	AFDN	P55196	1824 aa	Known RBP	0.78	□□□□□ -2.29
NUP85-222	ENST00000583569	DNAH3	Q8TD57	4116 aa		0.77	□□□□□ -2.29
NUP85-222	ENST00000583569	SPAAR	A0A1B0GVQ0	90 aa		0.77	□□□□□ -2.29
NUP85-222	ENST00000583569	RBAKDN	A6NC62	111 aa		0.77	□□□□□ -2.29
NUP85-222	ENST00000583569	LINC00587	B1AMM8	73 aa		0.77	□□□□□ -2.29
NUP85-222	ENST00000583569		K7EIL1	84 aa		0.77	□□□□□ -2.29
NUP85-222	ENST00000583569	IFNA17	P01571	189 aa		0.77	□□□□□ -2.29
NUP85-222	ENST00000583569	CCL3L1	P16619	93 aa		0.77	□□□□□ -2.29
NUP85-222	ENST00000583569	FXYD6P3	P58550	94 aa		0.77	□□□□□ -2.29
NUP85-222	ENST00000583569	SPINK13	Q1W4C9	94 aa		0.77	□□□□□ -2.29
NUP85-222	ENST00000583569	COX7B2	Q8TF08	81 aa		0.77	□□□□□ -2.29
NUP85-222	ENST00000583569	SNRNP25	Q9BV90	132 aa	Known RBP	0.77	□□□□□ -2.29
NUP85-222	ENST00000583569	NAA60	Q9H7X0	242 aa		0.77	□□□□□ -2.29
NUP85-222	ENST00000583569	SERP1	Q9Y6X1	66 aa		0.77	□□□□□ -2.29
NUP85-222	ENST00000583569	MAGI1	Q96QZ7	1491 aa	Predicted RBP	0.77	□□□□□ -2.29
NUP85-222	ENST00000583569	PLCH1	Q4KWH8	1693 aa		0.77	□□□□□ -2.29
NUP85-222	ENST00000583569	SPEF2	Q9C093	1822 aa		0.77	□□□□□ -2.29
NUP85-222	ENST00000583569	PLXNA2	O75051	1894 aa		0.77	□□□□□ -2.29
NUP85-222	ENST00000583569	WNK2	Q9Y3S1	2297 aa		0.76	□□□□□ -2.29
NUP85-222	ENST00000583569	SPTB	P11277	2137 aa		0.76	□□□□□ -2.29
NUP85-222	ENST00000583569	NAIP	Q13075	1403 aa		0.76	□□□□□ -2.29
NUP85-222	ENST00000583569	MIF4GD	A9UHW6	222 aa	Known RBP	0.76	□□□□□ -2.29
NUP85-222	ENST00000583569	MCRIP1	C9JLW8	97 aa		0.76	□□□□□ -2.29
NUP85-222	ENST00000583569	SSBP1	Q04837	148 aa	Known RBP	0.76	□□□□□ -2.29
NUP85-222	ENST00000583569	FAM74A4	Q5TZK3	123 aa		0.76	□□□□□ -2.29
NUP85-222	ENST00000583569	AKAP11	Q9UKA4	1901 aa		0.76	□□□□□ -2.29
NUP85-222	ENST00000583569	MUC22	E2RYF6	1773 aa	Predicted RBP	0.75	□□□□□ -2.29
NUP85-222	ENST00000583569	UGGT2	Q9NYU1	1516 aa		0.75	□□□□□ -2.29
NUP85-222	ENST00000583569	ZNF518A	Q6AHZ1	1483 aa		0.75	□□□□□ -2.29
NUP85-222	ENST00000583569	MBD5	Q9P267	1494 aa		0.75	□□□□□ -2.29
NUP85-222	ENST00000583569	DAPK1	P53355	1430 aa		0.75	□□□□□ -2.29
NUP85-222	ENST00000583569	FGF7	P21781	194 aa		0.75	□□□□□ -2.29
NUP85-222	ENST00000583569	UBE2D1	P51668	147 aa		0.75	□□□□□ -2.29

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