RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 Q8N8P6 123 aa4.87□□□□□ -1.63
CCDC47-205ENST00000582331 C9orf163Q8N9P6 203 aa4.87□□□□□ -1.63
CCDC47-205ENST00000582331 C9orf85Q96MD7 179 aa4.87□□□□□ -1.63
CCDC47-205ENST00000582331 LINC01600Q96MT4 127 aa4.87□□□□□ -1.63
CCDC47-205ENST00000582331 MIEN1Q9BRT3 115 aa4.87□□□□□ -1.63
CCDC47-205ENST00000582331 CDIP1Q9H305 208 aa4.87□□□□□ -1.63
CCDC47-205ENST00000582331 MAP1LC3AQ9H492 121 aa4.87□□□□□ -1.63
CCDC47-205ENST00000582331 KIF25-AS1Q9Y6Z4 181 aa4.87□□□□□ -1.63
CCDC47-205ENST00000582331 A0A087WX48 190 aa4.86□□□□□ -1.63
CCDC47-205ENST00000582331 PANO1I0J062 215 aa4.86□□□□□ -1.63
CCDC47-205ENST00000582331 M0R381 172 aa4.86□□□□□ -1.63
CCDC47-205ENST00000582331 ODF1Q14990 250 aa4.86□□□□□ -1.63
CCDC47-205ENST00000582331 MAJINQ3KP22 176 aa4.86□□□□□ -1.63
CCDC47-205ENST00000582331 LINC01545Q5VT33 79 aa4.86□□□□□ -1.63
CCDC47-205ENST00000582331 DPH3Q96FX2 82 aa4.86□□□□□ -1.63
CCDC47-205ENST00000582331 MRAP2Q96G30 205 aa4.86□□□□□ -1.63
CCDC47-205ENST00000582331 NXT2Q9NPJ8 142 aaKnown RBP4.86□□□□□ -1.63
CCDC47-205ENST00000582331 HSPB8Q9UJY1 196 aa4.86□□□□□ -1.63
CCDC47-205ENST00000582331 PAM16Q9Y3D7 125 aa4.86□□□□□ -1.63
CCDC47-205ENST00000582331 PHLDA3Q9Y5J5 127 aa4.86□□□□□ -1.63
CCDC47-205ENST00000582331 TRAV26-2A0A0B4J265 109 aa4.85□□□□□ -1.63
CCDC47-205ENST00000582331 USP17L23D6RBM5 183 aa4.85□□□□□ -1.63
CCDC47-205ENST00000582331 HBDP02042 147 aa4.85□□□□□ -1.63
CCDC47-205ENST00000582331 LINC00694P0DN24 101 aa4.85□□□□□ -1.63
CCDC47-205ENST00000582331 IGLC3P0DOY3 106 aa4.85□□□□□ -1.63
CCDC47-205ENST00000582331 FCER1GP30273 86 aa4.85□□□□□ -1.63
CCDC47-205ENST00000582331 SPATA45Q537H7 98 aa4.85□□□□□ -1.63
CCDC47-205ENST00000582331 SDIM1Q6ZPB5 146 aa4.85□□□□□ -1.63
CCDC47-205ENST00000582331 ATOH7Q8N100 152 aa4.85□□□□□ -1.63
CCDC47-205ENST00000582331 C14orf178Q8N769 122 aaPredicted RBP4.85□□□□□ -1.63
CCDC47-205ENST00000582331 PTH2Q96A98 100 aa4.85□□□□□ -1.63
CCDC47-205ENST00000582331 C1orf43Q9BWL3 253 aa4.85□□□□□ -1.63
CCDC47-205ENST00000582331 MAP1LC3CQ9BXW4 147 aa4.85□□□□□ -1.63
CCDC47-205ENST00000582331 C20orf202A1L168 122 aa4.84□□□□□ -1.63
CCDC47-205ENST00000582331 PRSS1P07477 247 aa4.84□□□□□ -1.63
CCDC47-205ENST00000582331 ZFP2Q6ZN57 461 aa4.84□□□□□ -1.63
CCDC47-205ENST00000582331 CHCHD7Q9BUK0 85 aa4.84□□□□□ -1.63
CCDC47-205ENST00000582331 JPT2Q9H910 190 aa4.84□□□□□ -1.63
CCDC47-205ENST00000582331 Q9UF83 564 aa4.84□□□□□ -1.63
CCDC47-205ENST00000582331 A0A0J9YXV3 536 aa4.83□□□□□ -1.64
CCDC47-205ENST00000582331 A8MWV9 139 aa4.83□□□□□ -1.64
CCDC47-205ENST00000582331 TMEM262E9PQX1 116 aa4.83□□□□□ -1.64
CCDC47-205ENST00000582331 KRTAP10-8P60410 259 aa4.83□□□□□ -1.64
CCDC47-205ENST00000582331 ENHOQ6UWT2 76 aa4.83□□□□□ -1.64
CCDC47-205ENST00000582331 IFI27L1Q96BM0 104 aa4.83□□□□□ -1.64
CCDC47-205ENST00000582331 RPL39LQ96EH5 51 aaKnown RBP4.83□□□□□ -1.64
CCDC47-205ENST00000582331 AP1S3Q96PC3 154 aa4.83□□□□□ -1.64
CCDC47-205ENST00000582331 C20orf78Q9BR46 151 aa4.83□□□□□ -1.64
CCDC47-205ENST00000582331 C2orf88Q9BSF0 95 aa4.83□□□□□ -1.64
CCDC47-205ENST00000582331 SMIM2Q9BVW6 85 aa4.83□□□□□ -1.64
CCDC47-205ENST00000582331 SNHG12Q9BXW3 62 aa4.83□□□□□ -1.64
CCDC47-205ENST00000582331 UQCR10Q9UDW1 63 aa4.83□□□□□ -1.64
CCDC47-205ENST00000582331 hDV102S1A0JD36 115 aa4.82□□□□□ -1.64
CCDC47-205ENST00000582331 CRPP02741 224 aa4.82□□□□□ -1.64
CCDC47-205ENST00000582331 MGPP08493 103 aa4.82□□□□□ -1.64
CCDC47-205ENST00000582331 SMIM17P0DL12 118 aa4.82□□□□□ -1.64
CCDC47-205ENST00000582331 SUMO2P61956 95 aaKnown RBP4.82□□□□□ -1.64
CCDC47-205ENST00000582331 RPL32P62910 135 aaKnown RBP4.82□□□□□ -1.64
CCDC47-205ENST00000582331 CIRBPQ14011 172 aaKnown RBP4.82□□□□□ -1.64
CCDC47-205ENST00000582331 MRPL52Q86TS9 123 aaKnown RBP4.82□□□□□ -1.64
CCDC47-205ENST00000582331 PMCHL2Q9BQD1 86 aa4.82□□□□□ -1.64
CCDC47-205ENST00000582331 ST20Q9HBF5 79 aa4.82□□□□□ -1.64
CCDC47-205ENST00000582331 LPAP08519 4548 aa4.81□□□□□ -1.64
CCDC47-205ENST00000582331 A0A087WYN8 130 aa4.81□□□□□ -1.64
CCDC47-205ENST00000582331 TRBV6-5A0A0K0K1A5 114 aa4.81□□□□□ -1.64
CCDC47-205ENST00000582331 M0R143 59 aa4.81□□□□□ -1.64
CCDC47-205ENST00000582331 TCAPO15273 167 aa4.81□□□□□ -1.64
CCDC47-205ENST00000582331 PPP1R17O96001 155 aa4.81□□□□□ -1.64
CCDC47-205ENST00000582331 POLR2KP53803 58 aaKnown RBP4.81□□□□□ -1.64
CCDC47-205ENST00000582331 SUMO4Q6EEV6 95 aa4.81□□□□□ -1.64
CCDC47-205ENST00000582331 C7orf33Q8WU49 177 aa4.81□□□□□ -1.64
CCDC47-205ENST00000582331 IGHV3-64A0A075B6Q5 118 aa4.8□□□□□ -1.64
CCDC47-205ENST00000582331 A0A087WWL8 130 aa4.8□□□□□ -1.64
CCDC47-205ENST00000582331 H0Y8G0 127 aa4.8□□□□□ -1.64
CCDC47-205ENST00000582331 K7EMI3 77 aa4.8□□□□□ -1.64
CCDC47-205ENST00000582331 M0QY20 66 aa4.8□□□□□ -1.64
CCDC47-205ENST00000582331 ATP5LO75964 103 aa4.8□□□□□ -1.64
CCDC47-205ENST00000582331 MIAQ16674 131 aa4.8□□□□□ -1.64
CCDC47-205ENST00000582331 LBHQ53QV2 105 aaPredicted RBP4.8□□□□□ -1.64
CCDC47-205ENST00000582331 PIK3CD-AS1Q5SR53 167 aa4.8□□□□□ -1.64
CCDC47-205ENST00000582331 REG3GQ6UW15 175 aa4.8□□□□□ -1.64
CCDC47-205ENST00000582331 RHODO00212 210 aa4.79□□□□□ -1.64
CCDC47-205ENST00000582331 ANGP03950 147 aaKnown RBP4.79□□□□□ -1.64
CCDC47-205ENST00000582331 CHTF8P0CG12 524 aa4.79□□□□□ -1.64
CCDC47-205ENST00000582331 CNBPP62633 177 aaKnown RBP4.79□□□□□ -1.64
CCDC47-205ENST00000582331 ORMDL2Q53FV1 153 aa4.79□□□□□ -1.64
CCDC47-205ENST00000582331 UFSP1Q6NVU6 142 aa4.79□□□□□ -1.64
CCDC47-205ENST00000582331 Q6ZN92 141 aa4.79□□□□□ -1.64
CCDC47-205ENST00000582331 TOMM6Q96B49 74 aa4.79□□□□□ -1.64
CCDC47-205ENST00000582331 PLAC8Q9NZF1 115 aa4.79□□□□□ -1.64
CCDC47-205ENST00000582331 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.78□□□□□ -1.64
CCDC47-205ENST00000582331 A0A1B0GV90 55 aa4.78□□□□□ -1.64
CCDC47-205ENST00000582331 HSBP1L1C9JCN9 74 aa4.78□□□□□ -1.64
CCDC47-205ENST00000582331 F5H697 171 aa4.78□□□□□ -1.64
CCDC47-205ENST00000582331 VCYO14598 125 aa4.78□□□□□ -1.64
CCDC47-205ENST00000582331 COX8AP10176 69 aa4.78□□□□□ -1.64
CCDC47-205ENST00000582331 RPL36AP83881 106 aaKnown RBP4.78□□□□□ -1.64
CCDC47-205ENST00000582331 MPV17L2Q567V2 206 aa4.78□□□□□ -1.64
CCDC47-205ENST00000582331 SLC25A34Q6PIV7 304 aa4.78□□□□□ -1.64
CCDC47-205ENST00000582331 SPINK6Q6UWN8 80 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms