RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 CXCL1P09341 107 aa3.56□□□□□ -1.84
PPP4R1-216ENST00000580283 NTF3P20783 257 aa3.56□□□□□ -1.84
PPP4R1-216ENST00000580283 ATP6V0CP27449 155 aa3.56□□□□□ -1.84
PPP4R1-216ENST00000580283 H2BFSP57053 126 aa3.56□□□□□ -1.84
PPP4R1-216ENST00000580283 CXCL6P80162 114 aa3.56□□□□□ -1.84
PPP4R1-216ENST00000580283 SPANXN1Q5VSR9 72 aa3.56□□□□□ -1.84
PPP4R1-216ENST00000580283 RASL11AQ6T310 242 aa3.56□□□□□ -1.84
PPP4R1-216ENST00000580283 PPDPFQ9H3Y8 114 aa3.56□□□□□ -1.84
PPP4R1-216ENST00000580283 TMEM167BQ9NRX6 74 aa3.56□□□□□ -1.84
PPP4R1-216ENST00000580283 LYRM1O43325 122 aa3.55□□□□□ -1.84
PPP4R1-216ENST00000580283 MPC2O95563 127 aa3.55□□□□□ -1.84
PPP4R1-216ENST00000580283 MGPP08493 103 aa3.55□□□□□ -1.84
PPP4R1-216ENST00000580283 S100A5P33763 92 aa3.55□□□□□ -1.84
PPP4R1-216ENST00000580283 COTL1Q14019 142 aa3.55□□□□□ -1.84
PPP4R1-216ENST00000580283 SS18Q15532 418 aa3.55□□□□□ -1.84
PPP4R1-216ENST00000580283 RNASEKQ6P5S7 137 aaKnown RBP3.55□□□□□ -1.84
PPP4R1-216ENST00000580283 CD164L2Q6UWJ8 174 aa3.55□□□□□ -1.84
PPP4R1-216ENST00000580283 C2orf66Q6UXQ4 117 aa3.55□□□□□ -1.84
PPP4R1-216ENST00000580283 LINC00173Q6ZV60 143 aa3.55□□□□□ -1.84
PPP4R1-216ENST00000580283 FAM19A5Q7Z5A7 132 aaPredicted RBP3.55□□□□□ -1.84
PPP4R1-216ENST00000580283 PPP1R1CQ8WVI7 109 aa3.55□□□□□ -1.84
PPP4R1-216ENST00000580283 HIST1H2BAQ96A08 127 aa3.55□□□□□ -1.84
PPP4R1-216ENST00000580283 IGLC6P0CF74 106 aa3.54□□□□□ -1.84
PPP4R1-216ENST00000580283 SMIM17P0DL12 118 aa3.54□□□□□ -1.84
PPP4R1-216ENST00000580283 FMC1Q96HJ9 113 aa3.54□□□□□ -1.84
PPP4R1-216ENST00000580283 AP1S3Q96PC3 154 aa3.54□□□□□ -1.84
PPP4R1-216ENST00000580283 CAMK2N2Q96S95 79 aa3.54□□□□□ -1.84
PPP4R1-216ENST00000580283 CDC42SE2Q9NRR3 84 aa3.54□□□□□ -1.84
PPP4R1-216ENST00000580283 INMT-MINDY4F8WBC2 141 aa3.53□□□□□ -1.84
PPP4R1-216ENST00000580283 ATP6V1G1O75348 118 aa3.53□□□□□ -1.84
PPP4R1-216ENST00000580283 ESDP10768 282 aa3.53□□□□□ -1.84
PPP4R1-216ENST00000580283 AMMECR1LQ6DCA0 310 aa3.53□□□□□ -1.84
PPP4R1-216ENST00000580283 GATD1Q8NB37 220 aa3.53□□□□□ -1.84
PPP4R1-216ENST00000580283 TSKUQ8WUA8 353 aa3.53□□□□□ -1.84
PPP4R1-216ENST00000580283 ISOC2Q96AB3 205 aa3.53□□□□□ -1.84
PPP4R1-216ENST00000580283 NDUFA13Q9P0J0 144 aa3.53□□□□□ -1.84
PPP4R1-216ENST00000580283 UBE2G1P62253 170 aa3.52□□□□□ -1.85
PPP4R1-216ENST00000580283 SERF2P84101 59 aa3.52□□□□□ -1.85
PPP4R1-216ENST00000580283 EIF5AL1Q6IS14 154 aaKnown RBP3.52□□□□□ -1.85
PPP4R1-216ENST00000580283 LINC00304Q8N9R0 145 aa3.52□□□□□ -1.85
PPP4R1-216ENST00000580283 RPL39LQ96EH5 51 aaKnown RBP3.52□□□□□ -1.85
PPP4R1-216ENST00000580283 PSMG3Q9BT73 122 aaPredicted RBP3.52□□□□□ -1.85
PPP4R1-216ENST00000580283 ACTR3CQ9C0K3 210 aaPredicted RBP3.52□□□□□ -1.85
PPP4R1-216ENST00000580283 C19orf71A6NCJ1 209 aa3.51□□□□□ -1.85
PPP4R1-216ENST00000580283 CCDC160A6NGH7 325 aa3.51□□□□□ -1.85
PPP4R1-216ENST00000580283 G3V3Q6 166 aa3.51□□□□□ -1.85
PPP4R1-216ENST00000580283 M0QXV9 152 aa3.51□□□□□ -1.85
PPP4R1-216ENST00000580283 TLX1NBP0CAT3 122 aa3.51□□□□□ -1.85
PPP4R1-216ENST00000580283 DEFA1P59665 94 aa3.51□□□□□ -1.85
PPP4R1-216ENST00000580283 UBE2BP63146 152 aa3.51□□□□□ -1.85
PPP4R1-216ENST00000580283 C9orf129Q5T035 196 aaKnown RBP3.51□□□□□ -1.85
PPP4R1-216ENST00000580283 UNQ6190/PRO20217Q6UXQ8 127 aa3.51□□□□□ -1.85
PPP4R1-216ENST00000580283 C5orf38Q86SI9 138 aa3.51□□□□□ -1.85
PPP4R1-216ENST00000580283 LINC00518Q8N0U6 118 aa3.51□□□□□ -1.85
PPP4R1-216ENST00000580283 NKX6-2Q9C056 277 aaPredicted RBP3.51□□□□□ -1.85
PPP4R1-216ENST00000580283 MRPL35Q9NZE8 188 aaKnown RBP3.51□□□□□ -1.85
PPP4R1-216ENST00000580283 C6orf48Q9UBA6 75 aa3.51□□□□□ -1.85
PPP4R1-216ENST00000580283 TNFSF18Q9UNG2 199 aa3.51□□□□□ -1.85
PPP4R1-216ENST00000580283 F8WDY8 70 aa3.5□□□□□ -1.85
PPP4R1-216ENST00000580283 COX7A2LO14548 114 aa3.5□□□□□ -1.85
PPP4R1-216ENST00000580283 NCR2O95944 276 aa3.5□□□□□ -1.85
PPP4R1-216ENST00000580283 ZNF25P17030 456 aaPredicted RBP3.5□□□□□ -1.85
PPP4R1-216ENST00000580283 FOXA3P55318 350 aaPredicted RBP3.5□□□□□ -1.85
PPP4R1-216ENST00000580283 A0A0U1RRA0 63 aa3.49□□□□□ -1.85
PPP4R1-216ENST00000580283 CTXND1A0A1B0GTU2 59 aa3.49□□□□□ -1.85
PPP4R1-216ENST00000580283 SDHAF1A6NFY7 115 aa3.49□□□□□ -1.85
PPP4R1-216ENST00000580283 MBP02144 154 aa3.49□□□□□ -1.85
PPP4R1-216ENST00000580283 APCSP02743 223 aa3.49□□□□□ -1.85
PPP4R1-216ENST00000580283 RNASE13Q5GAN3 156 aaKnown RBP3.49□□□□□ -1.85
PPP4R1-216ENST00000580283 LYZL1Q6UWQ5 148 aa3.49□□□□□ -1.85
PPP4R1-216ENST00000580283 MRPL52Q86TS9 123 aaKnown RBP3.49□□□□□ -1.85
PPP4R1-216ENST00000580283 BAGE2Q86Y30 109 aa3.49□□□□□ -1.85
PPP4R1-216ENST00000580283 FAM104AQ969W3 186 aa3.49□□□□□ -1.85
PPP4R1-216ENST00000580283 IMMP2LQ96T52 175 aa3.49□□□□□ -1.85
PPP4R1-216ENST00000580283 RNASE7Q9H1E1 156 aaKnown RBP3.49□□□□□ -1.85
PPP4R1-216ENST00000580283 SMDT1Q9H4I9 107 aa3.49□□□□□ -1.85
PPP4R1-216ENST00000580283 BATF3Q9NR55 127 aa3.49□□□□□ -1.85
PPP4R1-216ENST00000580283 MACF1Q9UPN3 7388 aaKnown RBP3.48□□□□□ -1.85
PPP4R1-216ENST00000580283 FAM240BA0A1B0GVZ2 78 aa3.48□□□□□ -1.85
PPP4R1-216ENST00000580283 C1orf196B1AJZ1 125 aa3.48□□□□□ -1.85
PPP4R1-216ENST00000580283 AKR1C3P42330 323 aa3.48□□□□□ -1.85
PPP4R1-216ENST00000580283 SPAG11BQ08648 103 aa3.48□□□□□ -1.85
PPP4R1-216ENST00000580283 KIAA0087Q14695 138 aa3.48□□□□□ -1.85
PPP4R1-216ENST00000580283 KRTAP13-1Q8IUC0 172 aa3.48□□□□□ -1.85
PPP4R1-216ENST00000580283 LINC00337Q8N6G1 96 aa3.48□□□□□ -1.85
PPP4R1-216ENST00000580283 OR2D3Q8NGH3 330 aa3.48□□□□□ -1.85
PPP4R1-216ENST00000580283 TMEM101Q96IK0 257 aa3.48□□□□□ -1.85
PPP4R1-216ENST00000580283 TPPP3Q9BW30 176 aa3.48□□□□□ -1.85
PPP4R1-216ENST00000580283 SYNE2Q8WXH0 6885 aaKnown RBP3.47□□□□□ -1.85
PPP4R1-216ENST00000580283 A0A1B0GVG6 124 aa3.47□□□□□ -1.85
PPP4R1-216ENST00000580283 NUPR1O60356 82 aa3.47□□□□□ -1.85
PPP4R1-216ENST00000580283 HERV-K104P63124 156 aa3.47□□□□□ -1.85
PPP4R1-216ENST00000580283 CTAG1AP78358 180 aa3.47□□□□□ -1.85
PPP4R1-216ENST00000580283 TMEM241Q24JQ0 296 aa3.47□□□□□ -1.85
PPP4R1-216ENST00000580283 RPL7L1Q6DKI1 246 aaKnown RBP3.47□□□□□ -1.85
PPP4R1-216ENST00000580283 C3orf22Q8N5N4 141 aa3.47□□□□□ -1.85
PPP4R1-216ENST00000580283 OR10D4PQ8NGN7 298 aa3.47□□□□□ -1.85
PPP4R1-216ENST00000580283 BTF3L4Q96K17 158 aa3.47□□□□□ -1.85
PPP4R1-216ENST00000580283 C22orf24Q9Y442 160 aa3.47□□□□□ -1.85
PPP4R1-216ENST00000580283 TRAV13-1A0A0B4J241 112 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 202.1 ms