RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 TRBV24-1A0A075B6N3 115 aa10.89□□□□□ -0.67
MKS1-209ENST00000580127 H0Y9J4 135 aa10.89□□□□□ -0.67
MKS1-209ENST00000580127 MRPL51Q4U2R6 128 aaKnown RBP10.89□□□□□ -0.67
MKS1-209ENST00000580127 FAM74A3Q4VXF1 159 aa10.89□□□□□ -0.67
MKS1-209ENST00000580127 V9GYV3 84 aa10.89□□□□□ -0.67
MKS1-209ENST00000580127 TGIF2-C20orf24A0A0A6YYL0 155 aa10.88□□□□□ -0.67
MKS1-209ENST00000580127 IGHV3OR16-9A0A0B4J2B5 98 aa10.88□□□□□ -0.67
MKS1-209ENST00000580127 S100A8P05109 93 aa10.88□□□□□ -0.67
MKS1-209ENST00000580127 TLX1NBP0CAT3 122 aa10.88□□□□□ -0.67
MKS1-209ENST00000580127 HBBP68871 147 aa10.88□□□□□ -0.67
MKS1-209ENST00000580127 F8W036 122 aa10.87□□□□□ -0.67
MKS1-209ENST00000580127 UBE2D1P51668 147 aa10.87□□□□□ -0.67
MKS1-209ENST00000580127 MRPS36P82909 103 aaKnown RBP10.87□□□□□ -0.67
MKS1-209ENST00000580127 IFITM10A6NMD0 228 aa10.86□□□□□ -0.67
MKS1-209ENST00000580127 RPL13AP40429 203 aaKnown RBP10.86□□□□□ -0.67
MKS1-209ENST00000580127 UBE2BP63146 152 aa10.86□□□□□ -0.67
MKS1-209ENST00000580127 GAGE2EQ4V326 116 aa10.86□□□□□ -0.67
MKS1-209ENST00000580127 GAGE2DQ9UEU5 116 aa10.86□□□□□ -0.67
MKS1-209ENST00000580127 TNFRSF6BO95407 300 aa10.85□□□□□ -0.67
MKS1-209ENST00000580127 SRP19P09132 144 aaKnown RBP10.85□□□□□ -0.67
MKS1-209ENST00000580127 RAB5AP20339 215 aa10.85□□□□□ -0.67
MKS1-209ENST00000580127 RPL39P62891 51 aaKnown RBP10.85□□□□□ -0.67
MKS1-209ENST00000580127 UNQ6190/PRO20217Q6UXQ8 127 aa10.85□□□□□ -0.67
MKS1-209ENST00000580127 FAM19A5Q7Z5A7 132 aaPredicted RBP10.85□□□□□ -0.67
MKS1-209ENST00000580127 AKAP14Q86UN6 197 aa10.85□□□□□ -0.67
MKS1-209ENST00000580127 SMIM2Q9BVW6 85 aa10.84□□□□□ -0.67
MKS1-209ENST00000580127 SMIM27A0A1W2PRY6 76 aa10.83□□□□□ -0.68
MKS1-209ENST00000580127 FAM168BA1KXE4 195 aa10.83□□□□□ -0.68
MKS1-209ENST00000580127 PPBPP02775 128 aa10.83□□□□□ -0.68
MKS1-209ENST00000580127 PACRGQ96M98 296 aaPredicted RBP10.83□□□□□ -0.68
MKS1-209ENST00000580127 SMDT1Q9H4I9 107 aa10.83□□□□□ -0.68
MKS1-209ENST00000580127 TRBV30A0A0K0K1B3 111 aa10.82□□□□□ -0.68
MKS1-209ENST00000580127 IFI27P40305 119 aaPredicted RBP10.82□□□□□ -0.68
MKS1-209ENST00000580127 ADIRFQ15847 76 aa10.82□□□□□ -0.68
MKS1-209ENST00000580127 C10orf25Q5T742 122 aa10.82□□□□□ -0.68
MKS1-209ENST00000580127 C6orf48Q9UBA6 75 aa10.82□□□□□ -0.68
MKS1-209ENST00000580127 M0QXV9 152 aa10.81□□□□□ -0.68
MKS1-209ENST00000580127 RPL23P62829 140 aaKnown RBP10.81□□□□□ -0.68
MKS1-209ENST00000580127 NAT8Q9UHE5 227 aa10.81□□□□□ -0.68
MKS1-209ENST00000580127 D6R8Y8 96 aa10.8□□□□□ -0.68
MKS1-209ENST00000580127 PRR4Q16378 134 aa10.8□□□□□ -0.68
MKS1-209ENST00000580127 CARHSP1Q9Y2V2 147 aaKnown RBP10.8□□□□□ -0.68
MKS1-209ENST00000580127 NDUFC2-KCTD14E9PQ53 114 aa10.79□□□□□ -0.68
MKS1-209ENST00000580127 PYGO1Q9Y3Y4 419 aa10.79□□□□□ -0.68
MKS1-209ENST00000580127 A0A0U1RQV1 116 aa10.78□□□□□ -0.68
MKS1-209ENST00000580127 FAM104AQ969W3 186 aa10.78□□□□□ -0.68
MKS1-209ENST00000580127 PRSS2P07478 247 aa10.77□□□□□ -0.69
MKS1-209ENST00000580127 KRTAP11-1Q8IUC1 163 aa10.77□□□□□ -0.69
MKS1-209ENST00000580127 LINC01561Q8N1V8 128 aa10.77□□□□□ -0.69
MKS1-209ENST00000580127 C2orf88Q9BSF0 95 aa10.77□□□□□ -0.69
MKS1-209ENST00000580127 NPYP01303 97 aa10.76□□□□□ -0.69
MKS1-209ENST00000580127 CKS1BP61024 79 aa10.76□□□□□ -0.69
MKS1-209ENST00000580127 KIAA0087Q14695 138 aa10.76□□□□□ -0.69
MKS1-209ENST00000580127 PEA15Q15121 130 aa10.76□□□□□ -0.69
MKS1-209ENST00000580127 LINC00242Q5T6M2 205 aa10.76□□□□□ -0.69
MKS1-209ENST00000580127 ORMDL3Q8N138 153 aa10.76□□□□□ -0.69
MKS1-209ENST00000580127 TMEM141Q96I45 108 aa10.76□□□□□ -0.69
MKS1-209ENST00000580127 LBHQ53QV2 105 aaPredicted RBP10.75□□□□□ -0.69
MKS1-209ENST00000580127 MRPL54Q6P161 138 aaKnown RBP10.75□□□□□ -0.69
MKS1-209ENST00000580127 Q6ZN92 141 aa10.75□□□□□ -0.69
MKS1-209ENST00000580127 TEX43Q6ZNM6 134 aa10.75□□□□□ -0.69
MKS1-209ENST00000580127 TMEM136Q6ZRR5 245 aa10.75□□□□□ -0.69
MKS1-209ENST00000580127 ZNF861PO60384 105 aa10.74□□□□□ -0.69
MKS1-209ENST00000580127 KRTAP1-4P0C5Y4 121 aa10.74□□□□□ -0.69
MKS1-209ENST00000580127 C6orf226Q5I0X4 101 aa10.74□□□□□ -0.69
MKS1-209ENST00000580127 C2orf82Q6UX34 121 aa10.74□□□□□ -0.69
MKS1-209ENST00000580127 PRELID3AQ96N28 172 aa10.74□□□□□ -0.69
MKS1-209ENST00000580127 NUPR1O60356 82 aa10.73□□□□□ -0.69
MKS1-209ENST00000580127 IGLV4-3A0A075B6K6 122 aa10.72□□□□□ -0.69
MKS1-209ENST00000580127 VCX2Q9H322 139 aa10.72□□□□□ -0.69
MKS1-209ENST00000580127 C9orf129Q5T035 196 aaKnown RBP10.71□□□□□ -0.69
MKS1-209ENST00000580127 ATP5L2Q7Z4Y8 100 aa10.71□□□□□ -0.69
MKS1-209ENST00000580127 KRTAP7-1Q8IUC3 87 aa10.71□□□□□ -0.69
MKS1-209ENST00000580127 LAMTOR2Q9Y2Q5 125 aa10.71□□□□□ -0.69
MKS1-209ENST00000580127 A0A1B0GXF2 115 aa10.7□□□□□ -0.7
MKS1-209ENST00000580127 TOMM7Q9P0U1 55 aa10.7□□□□□ -0.7
MKS1-209ENST00000580127 CYSLTR1Q9Y271 337 aa10.7□□□□□ -0.7
MKS1-209ENST00000580127 SEC11AP67812 179 aa10.69□□□□□ -0.7
MKS1-209ENST00000580127 MAP1LC3AQ9H492 121 aa10.69□□□□□ -0.7
MKS1-209ENST00000580127 hCG_2014768A0A024R1R8 64 aa10.68□□□□□ -0.7
MKS1-209ENST00000580127 PRSS47A8MTI9 375 aa10.68□□□□□ -0.7
MKS1-209ENST00000580127 NPSP0C0P6 89 aa10.68□□□□□ -0.7
MKS1-209ENST00000580127 G0S2P27469 103 aa10.68□□□□□ -0.7
MKS1-209ENST00000580127 RPL28P46779 137 aaKnown RBP10.68□□□□□ -0.7
MKS1-209ENST00000580127 PAPPA-AS1Q5QFB9 102 aa10.68□□□□□ -0.7
MKS1-209ENST00000580127 ALKBH7Q9BT30 221 aaPredicted RBP10.68□□□□□ -0.7
MKS1-209ENST00000580127 C22orf24Q9Y442 160 aa10.68□□□□□ -0.7
MKS1-209ENST00000580127 LPAP08519 4548 aa10.67□□□□□ -0.7
MKS1-209ENST00000580127 LOC389332A0A1B0GUA5 103 aa10.67□□□□□ -0.7
MKS1-209ENST00000580127 ORMDL2Q53FV1 153 aa10.67□□□□□ -0.7
MKS1-209ENST00000580127 Q8IZM0 81 aa10.67□□□□□ -0.7
MKS1-209ENST00000580127 C9JQL5 133 aa10.66□□□□□ -0.7
MKS1-209ENST00000580127 K7EMI3 77 aa10.66□□□□□ -0.7
MKS1-209ENST00000580127 TSPAN13O95857 204 aa10.66□□□□□ -0.7
MKS1-209ENST00000580127 C2orf66Q6UXQ4 117 aa10.66□□□□□ -0.7
MKS1-209ENST00000580127 CTDSP1Q9GZU7 261 aa10.66□□□□□ -0.7
MKS1-209ENST00000580127 CRYGAP11844 174 aa10.65□□□□□ -0.7
MKS1-209ENST00000580127 LINC00469Q8N7U9 141 aa10.65□□□□□ -0.7
MKS1-209ENST00000580127 TP73-AS1Q9UF72 201 aa10.65□□□□□ -0.7
MKS1-209ENST00000580127 HERVK_113P63121 156 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms