RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 OBSL1O75147 1896 aa3.1□□□□□ -1.91
CDH8-205ENST00000577730 Q6ZSN1 163 aa3.09□□□□□ -1.91
CDH8-205ENST00000577730 IGKV2-24A0A0C4DH68 120 aa3.09□□□□□ -1.91
CDH8-205ENST00000577730 RPL37AP8A6NKH3 93 aa3.09□□□□□ -1.91
CDH8-205ENST00000577730 LY6G6DO95868 133 aa3.09□□□□□ -1.91
CDH8-205ENST00000577730 IGHV6-1A0A0B4J1U7 121 aa3.09□□□□□ -1.91
CDH8-205ENST00000577730 TRBV7-4A0A0J9YYF1 115 aa3.09□□□□□ -1.91
CDH8-205ENST00000577730 FNDC1Q4ZHG4 1894 aaPredicted RBP3.09□□□□□ -1.91
CDH8-205ENST00000577730 RLFQ13129 1914 aa3.09□□□□□ -1.92
CDH8-205ENST00000577730 ABCA7Q8IZY2 2146 aa3.08□□□□□ -1.92
CDH8-205ENST00000577730 C6orf48Q9UBA6 75 aa3.08□□□□□ -1.92
CDH8-205ENST00000577730 UNC13CQ8NB66 2214 aa3.08□□□□□ -1.92
CDH8-205ENST00000577730 C19orf84I3L1E1 186 aa3.08□□□□□ -1.92
CDH8-205ENST00000577730 DEFB4AO15263 64 aa3.08□□□□□ -1.92
CDH8-205ENST00000577730 COL4A4P53420 1690 aaPredicted RBP3.08□□□□□ -1.92
CDH8-205ENST00000577730 OBSCN-AS1Q96MR7 158 aa3.08□□□□□ -1.92
CDH8-205ENST00000577730 IGHV3OR16-9A0A0B4J2B5 98 aa3.08□□□□□ -1.92
CDH8-205ENST00000577730 UQCR11O14957 56 aa3.08□□□□□ -1.92
CDH8-205ENST00000577730 C9orf66Q5T8R8 295 aa3.08□□□□□ -1.92
CDH8-205ENST00000577730 Q8NBF4 154 aa3.08□□□□□ -1.92
CDH8-205ENST00000577730 RNF223E7ERA6 249 aa3.08□□□□□ -1.92
CDH8-205ENST00000577730 KIAA0087Q14695 138 aa3.08□□□□□ -1.92
CDH8-205ENST00000577730 ZNF702PQ9H963 129 aa3.08□□□□□ -1.92
CDH8-205ENST00000577730 LINC00588Q9Y4M8 146 aa3.08□□□□□ -1.92
CDH8-205ENST00000577730 DEFB135Q30KP9 77 aa3.07□□□□□ -1.92
CDH8-205ENST00000577730 LELP1Q5T871 98 aa3.07□□□□□ -1.92
CDH8-205ENST00000577730 SPINK6Q6UWN8 80 aa3.07□□□□□ -1.92
CDH8-205ENST00000577730 DENND4CQ5VZ89 1909 aa3.07□□□□□ -1.92
CDH8-205ENST00000577730 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.07□□□□□ -1.92
CDH8-205ENST00000577730 IGLV1-40P01703 118 aa3.07□□□□□ -1.92
CDH8-205ENST00000577730 PHF3Q92576 2039 aaKnown RBP3.07□□□□□ -1.92
CDH8-205ENST00000577730 KIAA1671Q9BY89 1806 aa3.07□□□□□ -1.92
CDH8-205ENST00000577730 A0A1B0GUV1 79 aa3.07□□□□□ -1.92
CDH8-205ENST00000577730 SPINK1P00995 79 aa3.07□□□□□ -1.92
CDH8-205ENST00000577730 C11orf45Q8TAV5 145 aa3.07□□□□□ -1.92
CDH8-205ENST00000577730 Q75L30 129 aa3.06□□□□□ -1.92
CDH8-205ENST00000577730 Q9BRP9 147 aa3.06□□□□□ -1.92
CDH8-205ENST00000577730 TICRRQ7Z2Z1 1910 aa3.06□□□□□ -1.92
CDH8-205ENST00000577730 MIR22HGQ0VDD5 57 aa3.06□□□□□ -1.92
CDH8-205ENST00000577730 SPANXA2-OT1Q8N9U9 137 aa3.06□□□□□ -1.92
CDH8-205ENST00000577730 EML6Q6ZMW3 1958 aa3.06□□□□□ -1.92
CDH8-205ENST00000577730 REG3GQ6UW15 175 aa3.06□□□□□ -1.92
CDH8-205ENST00000577730 FAM229BQ4G0N7 80 aa3.06□□□□□ -1.92
CDH8-205ENST00000577730 C9orf129Q5T035 196 aaKnown RBP3.06□□□□□ -1.92
CDH8-205ENST00000577730 KMT2EQ8IZD2 1858 aa3.05□□□□□ -1.92
CDH8-205ENST00000577730 C14orf177Q52M58 125 aa3.05□□□□□ -1.92
CDH8-205ENST00000577730 COL4A6Q14031 1691 aa3.05□□□□□ -1.92
CDH8-205ENST00000577730 Q6ZRP5 223 aa3.05□□□□□ -1.92
CDH8-205ENST00000577730 K7EQZ3 153 aa3.05□□□□□ -1.92
CDH8-205ENST00000577730 LMO4P61968 165 aa3.05□□□□□ -1.92
CDH8-205ENST00000577730 MAPK1IP1LQ8NDC0 245 aa3.05□□□□□ -1.92
CDH8-205ENST00000577730 HEATR1Q9H583 2144 aaKnown RBP3.05□□□□□ -1.92
CDH8-205ENST00000577730 MDC1Q14676 2089 aaKnown RBP3.05□□□□□ -1.92
CDH8-205ENST00000577730 TMEM131Q92545 1883 aa3.05□□□□□ -1.92
CDH8-205ENST00000577730 LINC00167Q96N53 147 aa3.05□□□□□ -1.92
CDH8-205ENST00000577730 DNAJC13O75165 2243 aa3.05□□□□□ -1.92
CDH8-205ENST00000577730 TPRP12270 2363 aaKnown RBP3.05□□□□□ -1.92
CDH8-205ENST00000577730 MED12Q93074 2177 aa3.05□□□□□ -1.92
CDH8-205ENST00000577730 SSBP3-AS1Q7Z2R9 100 aa3.04□□□□□ -1.92
CDH8-205ENST00000577730 ZNF106Q9H2Y7 1883 aaKnown RBP3.04□□□□□ -1.92
CDH8-205ENST00000577730 PLA2G2AP14555 144 aa3.04□□□□□ -1.92
CDH8-205ENST00000577730 IGLV9-49A0A0B4J1Y8 123 aa3.04□□□□□ -1.92
CDH8-205ENST00000577730 SNRNP200O75643 2136 aaKnown RBP3.04□□□□□ -1.92
CDH8-205ENST00000577730 PRAC1Q96KF2 57 aa3.04□□□□□ -1.92
CDH8-205ENST00000577730 DOCK3Q8IZD9 2030 aa3.04□□□□□ -1.92
CDH8-205ENST00000577730 ESPL1Q14674 2120 aa3.04□□□□□ -1.92
CDH8-205ENST00000577730 SEC16AO15027 2179 aa3.04□□□□□ -1.92
CDH8-205ENST00000577730 C16orf90A8MZG2 172 aa3.04□□□□□ -1.92
CDH8-205ENST00000577730 DSCAML1Q8TD84 2053 aa3.04□□□□□ -1.92
CDH8-205ENST00000577730 ZNF318Q5VUA4 2279 aa3.04□□□□□ -1.92
CDH8-205ENST00000577730 EPM2AB3EWF7 344 aa3.03□□□□□ -1.92
CDH8-205ENST00000577730 C10orf99Q6UWK7 81 aa3.03□□□□□ -1.92
CDH8-205ENST00000577730 OCR1Q9BZK8 76 aa3.03□□□□□ -1.92
CDH8-205ENST00000577730 FAM186AA6NE01 2351 aa3.03□□□□□ -1.92
CDH8-205ENST00000577730 KIAA2026Q5HYC2 2103 aa3.03□□□□□ -1.92
CDH8-205ENST00000577730 Q5VV11 94 aa3.03□□□□□ -1.92
CDH8-205ENST00000577730 ALPK3Q96L96 1907 aa3.03□□□□□ -1.93
CDH8-205ENST00000577730 PLXND1Q9Y4D7 1925 aa3.03□□□□□ -1.93
CDH8-205ENST00000577730 A8MWP4 228 aa3.03□□□□□ -1.93
CDH8-205ENST00000577730 MYOFQ9NZM1 2061 aa3.02□□□□□ -1.93
CDH8-205ENST00000577730 C7orf33Q8WU49 177 aa3.02□□□□□ -1.93
CDH8-205ENST00000577730 BRWD3Q6RI45 1802 aa3.02□□□□□ -1.93
CDH8-205ENST00000577730 POLR2AP24928 1970 aaKnown RBP3.02□□□□□ -1.93
CDH8-205ENST00000577730 LINC00313P59037 77 aa3.02□□□□□ -1.93
CDH8-205ENST00000577730 ODF3L2Q3SX64 289 aa3.02□□□□□ -1.93
CDH8-205ENST00000577730 AVPP01185 164 aa3.02□□□□□ -1.93
CDH8-205ENST00000577730 MOBPQ13875 183 aa3.02□□□□□ -1.93
CDH8-205ENST00000577730 Q8N9P0 234 aaPredicted RBP3.02□□□□□ -1.93
CDH8-205ENST00000577730 TCF20Q9UGU0 1960 aaKnown RBP3.02□□□□□ -1.93
CDH8-205ENST00000577730 PHF5AQ7RTV0 110 aaKnown RBP3.02□□□□□ -1.93
CDH8-205ENST00000577730 ST20-AS1Q8NBB2 130 aa3.02□□□□□ -1.93
CDH8-205ENST00000577730 MYO7BQ6PIF6 2116 aa3.01□□□□□ -1.93
CDH8-205ENST00000577730 IGLV6-57P01721 117 aa3.01□□□□□ -1.93
CDH8-205ENST00000577730 PLXNB3Q9ULL4 1909 aa3.01□□□□□ -1.93
CDH8-205ENST00000577730 VWA8A3KMH1 1905 aa3.01□□□□□ -1.93
CDH8-205ENST00000577730 FBXL19-AS1Q494R0 122 aa3.01□□□□□ -1.93
CDH8-205ENST00000577730 LINC00476Q8WZB0 136 aa3.01□□□□□ -1.93
CDH8-205ENST00000577730 C16orf95Q9H693 158 aa3.01□□□□□ -1.93
CDH8-205ENST00000577730 LINC01558Q9Y6Z2 57 aa3.01□□□□□ -1.93
CDH8-205ENST00000577730 HELZP42694 1942 aaKnown RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms