RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 LINC01600Q96MT4 127 aa5.68□□□□□ -1.5
NPLOC4-210ENST00000572824 OPRPNQ99935 248 aaPredicted RBP5.68□□□□□ -1.5
NPLOC4-210ENST00000572824 ST20Q9HBF5 79 aa5.68□□□□□ -1.5
NPLOC4-210ENST00000572824 IGHV1-58A0A0C4DH39 117 aa5.67□□□□□ -1.5
NPLOC4-210ENST00000572824 A0A1B0GUT8 65 aa5.67□□□□□ -1.5
NPLOC4-210ENST00000572824 C7orf77A4D0Y5 90 aa5.67□□□□□ -1.5
NPLOC4-210ENST00000572824 A8MWL6 223 aa5.67□□□□□ -1.5
NPLOC4-210ENST00000572824 H7C423 109 aa5.67□□□□□ -1.5
NPLOC4-210ENST00000572824 ZNF25P17030 456 aaPredicted RBP5.67□□□□□ -1.5
NPLOC4-210ENST00000572824 RPL39P62891 51 aaKnown RBP5.67□□□□□ -1.5
NPLOC4-210ENST00000572824 SYCNQ0VAF6 134 aa5.67□□□□□ -1.5
NPLOC4-210ENST00000572824 CFAP161Q6P656 301 aa5.67□□□□□ -1.5
NPLOC4-210ENST00000572824 SMIM15Q7Z3B0 74 aa5.67□□□□□ -1.5
NPLOC4-210ENST00000572824 C5orf38Q86SI9 138 aa5.67□□□□□ -1.5
NPLOC4-210ENST00000572824 AKAP14Q86UN6 197 aa5.67□□□□□ -1.5
NPLOC4-210ENST00000572824 ZNF664Q8N3J9 261 aa5.67□□□□□ -1.5
NPLOC4-210ENST00000572824 NUP35Q8NFH5 326 aa5.67□□□□□ -1.5
NPLOC4-210ENST00000572824 TSKUQ8WUA8 353 aa5.67□□□□□ -1.5
NPLOC4-210ENST00000572824 TMEM191AQ9H0A3 160 aa5.67□□□□□ -1.5
NPLOC4-210ENST00000572824 UBE2D4Q9Y2X8 147 aa5.67□□□□□ -1.5
NPLOC4-210ENST00000572824 TRAV13-1A0A0B4J241 112 aa5.66□□□□□ -1.5
NPLOC4-210ENST00000572824 TRBV27A0A0K0K1C4 114 aa5.66□□□□□ -1.5
NPLOC4-210ENST00000572824 FAM168BA1KXE4 195 aa5.66□□□□□ -1.5
NPLOC4-210ENST00000572824 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.66□□□□□ -1.5
NPLOC4-210ENST00000572824 VCYO14598 125 aa5.66□□□□□ -1.5
NPLOC4-210ENST00000572824 CAMPP49913 170 aa5.66□□□□□ -1.5
NPLOC4-210ENST00000572824 KRTAP10-8P60410 259 aa5.66□□□□□ -1.5
NPLOC4-210ENST00000572824 SRSF9Q13242 221 aaKnown RBP eCLIP5.66□□□□□ -1.5
NPLOC4-210ENST00000572824 MRPL51Q4U2R6 128 aaKnown RBP5.66□□□□□ -1.5
NPLOC4-210ENST00000572824 PAPPA-AS1Q5QFB9 102 aa5.66□□□□□ -1.5
NPLOC4-210ENST00000572824 CD164L2Q6UWJ8 174 aa5.66□□□□□ -1.5
NPLOC4-210ENST00000572824 PHF5AQ7RTV0 110 aaKnown RBP5.66□□□□□ -1.5
NPLOC4-210ENST00000572824 MRPL52Q86TS9 123 aaKnown RBP5.66□□□□□ -1.5
NPLOC4-210ENST00000572824 TMEM101Q96IK0 257 aa5.66□□□□□ -1.5
NPLOC4-210ENST00000572824 BTF3L4Q96K17 158 aa5.66□□□□□ -1.5
NPLOC4-210ENST00000572824 ZNF727A8MUV8 499 aa5.65□□□□□ -1.5
NPLOC4-210ENST00000572824 TAGLN2P37802 199 aaKnown RBP5.65□□□□□ -1.5
NPLOC4-210ENST00000572824 RPL23P62829 140 aaKnown RBP5.65□□□□□ -1.5
NPLOC4-210ENST00000572824 ISOC2Q96AB3 205 aa5.65□□□□□ -1.5
NPLOC4-210ENST00000572824 EIF5A2Q9GZV4 153 aaKnown RBP5.65□□□□□ -1.5
NPLOC4-210ENST00000572824 RPL18AQ02543 176 aaKnown RBP5.64□□□□□ -1.51
NPLOC4-210ENST00000572824 SS18Q15532 418 aa5.64□□□□□ -1.51
NPLOC4-210ENST00000572824 TEX261Q6UWH6 196 aa5.64□□□□□ -1.51
NPLOC4-210ENST00000572824 OSTCQ9NRP0 149 aa5.64□□□□□ -1.51
NPLOC4-210ENST00000572824 PSORS1C2Q9UIG4 136 aa5.64□□□□□ -1.51
NPLOC4-210ENST00000572824 FCER1GP30273 86 aa5.63□□□□□ -1.51
NPLOC4-210ENST00000572824 SPAG11BQ08648 103 aa5.63□□□□□ -1.51
NPLOC4-210ENST00000572824 ADIRFQ15847 76 aa5.63□□□□□ -1.51
NPLOC4-210ENST00000572824 C9orf116Q5BN46 136 aaPredicted RBP5.63□□□□□ -1.51
NPLOC4-210ENST00000572824 KRTAP7-1Q8IUC3 87 aa5.63□□□□□ -1.51
NPLOC4-210ENST00000572824 BORCS7Q96B45 105 aa5.63□□□□□ -1.51
NPLOC4-210ENST00000572824 CAMK2N2Q96S95 79 aa5.63□□□□□ -1.51
NPLOC4-210ENST00000572824 IGLV5-37A0A075B6J1 123 aa5.62□□□□□ -1.51
NPLOC4-210ENST00000572824 LOC107984640A0A0U1RRK4 108 aa5.62□□□□□ -1.51
NPLOC4-210ENST00000572824 COX7A2LO14548 114 aa5.62□□□□□ -1.51
NPLOC4-210ENST00000572824 TCAPO15273 167 aa5.62□□□□□ -1.51
NPLOC4-210ENST00000572824 NPYP01303 97 aa5.62□□□□□ -1.51
NPLOC4-210ENST00000572824 SEC61BP60468 96 aaKnown RBP5.62□□□□□ -1.51
NPLOC4-210ENST00000572824 ZC2HC1BQ5TFG8 222 aa5.62□□□□□ -1.51
NPLOC4-210ENST00000572824 FAM104BQ5XKR9 115 aa5.62□□□□□ -1.51
NPLOC4-210ENST00000572824 MRPL54Q6P161 138 aaKnown RBP5.62□□□□□ -1.51
NPLOC4-210ENST00000572824 SPINK6Q6UWN8 80 aa5.62□□□□□ -1.51
NPLOC4-210ENST00000572824 D6R8Y8 96 aa5.61□□□□□ -1.51
NPLOC4-210ENST00000572824 APOMO95445 188 aa5.61□□□□□ -1.51
NPLOC4-210ENST00000572824 RIGQ13278 110 aa5.61□□□□□ -1.51
NPLOC4-210ENST00000572824 Q6ZRP5 223 aa5.61□□□□□ -1.51
NPLOC4-210ENST00000572824 IGKV2D-30A0A075B6S6 120 aa5.6□□□□□ -1.51
NPLOC4-210ENST00000572824 SMIM27A0A1W2PRY6 76 aa5.6□□□□□ -1.51
NPLOC4-210ENST00000572824 PRSS47A8MTI9 375 aa5.6□□□□□ -1.51
NPLOC4-210ENST00000572824 C1orf196B1AJZ1 125 aa5.6□□□□□ -1.51
NPLOC4-210ENST00000572824 FAM74A3Q4VXF1 159 aa5.6□□□□□ -1.51
NPLOC4-210ENST00000572824 C1orf137Q5JT78 98 aa5.6□□□□□ -1.51
NPLOC4-210ENST00000572824 UNQ6190/PRO20217Q6UXQ8 127 aa5.6□□□□□ -1.51
NPLOC4-210ENST00000572824 FAM19A5Q7Z5A7 132 aaPredicted RBP5.6□□□□□ -1.51
NPLOC4-210ENST00000572824 LINC00469Q8N7U9 141 aa5.6□□□□□ -1.51
NPLOC4-210ENST00000572824 ORAOV1Q8WV07 137 aa5.6□□□□□ -1.51
NPLOC4-210ENST00000572824 SMIM2Q9BVW6 85 aa5.6□□□□□ -1.51
NPLOC4-210ENST00000572824 C6orf48Q9UBA6 75 aa5.6□□□□□ -1.51
NPLOC4-210ENST00000572824 A0A1B0GXF2 115 aa5.59□□□□□ -1.51
NPLOC4-210ENST00000572824 TMEM241Q24JQ0 296 aa5.59□□□□□ -1.51
NPLOC4-210ENST00000572824 NAT8BQ9UHF3 227 aa5.59□□□□□ -1.51
NPLOC4-210ENST00000572824 IGHV3OR16-9A0A0B4J2B5 98 aa5.58□□□□□ -1.52
NPLOC4-210ENST00000572824 MT-ND6P03923 174 aa5.58□□□□□ -1.52
NPLOC4-210ENST00000572824 CKS2P33552 79 aa5.58□□□□□ -1.52
NPLOC4-210ENST00000572824 GAGE2EQ4V326 116 aa5.58□□□□□ -1.52
NPLOC4-210ENST00000572824 REG3GQ6UW15 175 aa5.58□□□□□ -1.52
NPLOC4-210ENST00000572824 C2orf82Q6UX34 121 aa5.58□□□□□ -1.52
NPLOC4-210ENST00000572824 C2orf48Q96LS8 159 aa5.58□□□□□ -1.52
NPLOC4-210ENST00000572824 KIR2DL4Q99706 377 aa5.58□□□□□ -1.52
NPLOC4-210ENST00000572824 LINC00474Q9P2X8 69 aa5.58□□□□□ -1.52
NPLOC4-210ENST00000572824 GAGE2DQ9UEU5 116 aa5.58□□□□□ -1.52
NPLOC4-210ENST00000572824 CSDC2Q9Y534 153 aaKnown RBP5.58□□□□□ -1.52
NPLOC4-210ENST00000572824 MUC2Q02817 5179 aa5.58□□□□□ -1.52
NPLOC4-210ENST00000572824 IFITM10A6NMD0 228 aa5.57□□□□□ -1.52
NPLOC4-210ENST00000572824 S100A12P80511 92 aa5.57□□□□□ -1.52
NPLOC4-210ENST00000572824 TIMM21Q9BVV7 248 aa5.57□□□□□ -1.52
NPLOC4-210ENST00000572824 NAT8Q9UHE5 227 aa5.57□□□□□ -1.52
NPLOC4-210ENST00000572824 IGLV4-3A0A075B6K6 122 aa5.56□□□□□ -1.52
NPLOC4-210ENST00000572824 TRBV24-1A0A075B6N3 115 aa5.56□□□□□ -1.52
NPLOC4-210ENST00000572824 KRTAP1-4P0C5Y4 121 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms