RNA–Protein interactions for RNA: ENST00000572383.1

PFN1-202, Transcript of profilin 1, humanhuman

TSL 3

Gene PFN1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-202ENST00000572383 C5orf38Q86SI9 138 aa11.75□□□□□ -0.53
PFN1-202ENST00000572383 AMELXQ99217 191 aa11.75□□□□□ -0.53
PFN1-202ENST00000572383 VCX2Q9H322 139 aa11.75□□□□□ -0.53
PFN1-202ENST00000572383 GVQW2A0A096LPI5 108 aaPredicted RBP11.74□□□□□ -0.53
PFN1-202ENST00000572383 IGHV1-58A0A0C4DH39 117 aa11.74□□□□□ -0.53
PFN1-202ENST00000572383 C2orf88Q9BSF0 95 aa11.74□□□□□ -0.53
PFN1-202ENST00000572383 A0A096LNJ9 63 aa11.73□□□□□ -0.53
PFN1-202ENST00000572383 MALP21145 153 aa11.73□□□□□ -0.53
PFN1-202ENST00000572383 UBE2D1P51668 147 aa11.73□□□□□ -0.53
PFN1-202ENST00000572383 RAB5BP61020 215 aa11.73□□□□□ -0.53
PFN1-202ENST00000572383 LINC00242Q5T6M2 205 aa11.73□□□□□ -0.53
PFN1-202ENST00000572383 IGHV3OR16-9A0A0B4J2B5 98 aa11.72□□□□□ -0.53
PFN1-202ENST00000572383 LINC01549A6NIU2 74 aa11.72□□□□□ -0.53
PFN1-202ENST00000572383 CNBPP62633 177 aaKnown RBP11.72□□□□□ -0.53
PFN1-202ENST00000572383 COX6A2Q02221 97 aa11.72□□□□□ -0.53
PFN1-202ENST00000572383 PMCHL1Q16048 86 aa11.72□□□□□ -0.53
PFN1-202ENST00000572383 FAM30AQ9NZY2 134 aa11.72□□□□□ -0.53
PFN1-202ENST00000572383 PAPPA-AS1Q5QFB9 102 aa11.71□□□□□ -0.53
PFN1-202ENST00000572383 C9orf163Q8N9P6 203 aa11.71□□□□□ -0.53
PFN1-202ENST00000572383 LINC00526Q96FQ7 95 aa11.71□□□□□ -0.53
PFN1-202ENST00000572383 EPM2AB3EWF7 344 aa11.7□□□□□ -0.54
PFN1-202ENST00000572383 FAT1Q14517 4588 aa11.69□□□□□ -0.54
PFN1-202ENST00000572383 HBDP02042 147 aa11.69□□□□□ -0.54
PFN1-202ENST00000572383 HAMPP81172 84 aa11.69□□□□□ -0.54
PFN1-202ENST00000572383 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.68□□□□□ -0.54
PFN1-202ENST00000572383 CHCHD1Q96BP2 118 aaKnown RBP11.68□□□□□ -0.54
PFN1-202ENST00000572383 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.67□□□□□ -0.54
PFN1-202ENST00000572383 ZNF561-AS1K7EIQ3 104 aa11.67□□□□□ -0.54
PFN1-202ENST00000572383 APOMO95445 188 aa11.67□□□□□ -0.54
PFN1-202ENST00000572383 PDZD11Q5EBL8 140 aa11.67□□□□□ -0.54
PFN1-202ENST00000572383 Q6ZSA8 131 aa11.67□□□□□ -0.54
PFN1-202ENST00000572383 FAM19A3Q7Z5A8 133 aa11.67□□□□□ -0.54
PFN1-202ENST00000572383 BAGE3Q86Y29 109 aa11.67□□□□□ -0.54
PFN1-202ENST00000572383 IGLV4-69A0A075B6H9 119 aa11.66□□□□□ -0.54
PFN1-202ENST00000572383 IGHV3-64A0A075B6Q5 118 aa11.66□□□□□ -0.54
PFN1-202ENST00000572383 A0A087WZ39 114 aa11.66□□□□□ -0.54
PFN1-202ENST00000572383 A0A0J9YXV3 536 aa11.65□□□□□ -0.54
PFN1-202ENST00000572383 SDIM1Q6ZPB5 146 aa11.65□□□□□ -0.54
PFN1-202ENST00000572383 CST9LQ9H4G1 147 aa11.65□□□□□ -0.54
PFN1-202ENST00000572383 VPS13BQ7Z7G8 4022 aa11.65□□□□□ -0.54
PFN1-202ENST00000572383 SPAG11BQ08648 103 aa11.64□□□□□ -0.55
PFN1-202ENST00000572383 PMVKQ15126 192 aa11.64□□□□□ -0.55
PFN1-202ENST00000572383 OR10D4PQ8NGN7 298 aa11.64□□□□□ -0.55
PFN1-202ENST00000572383 ORAOV1Q8WV07 137 aa11.64□□□□□ -0.55
PFN1-202ENST00000572383 ATP6V1G1O75348 118 aa11.63□□□□□ -0.55
PFN1-202ENST00000572383 HERVK_113P63121 156 aa11.63□□□□□ -0.55
PFN1-202ENST00000572383 SEC11AP67812 179 aa11.63□□□□□ -0.55
PFN1-202ENST00000572383 Q5VSD8 79 aa11.63□□□□□ -0.55
PFN1-202ENST00000572383 SRRM2Q9UQ35 2752 aaKnown RBP11.62□□□□□ -0.55
PFN1-202ENST00000572383 HSBP1O75506 76 aa11.62□□□□□ -0.55
PFN1-202ENST00000572383 S100A1P23297 94 aa11.62□□□□□ -0.55
PFN1-202ENST00000572383 NDUFA6P56556 154 aa11.62□□□□□ -0.55
PFN1-202ENST00000572383 LINC00310P59036 64 aa11.62□□□□□ -0.55
PFN1-202ENST00000572383 SYCNQ0VAF6 134 aa11.62□□□□□ -0.55
PFN1-202ENST00000572383 FAM19A2Q8N3H0 131 aa11.62□□□□□ -0.55
PFN1-202ENST00000572383 CARD19Q96LW7 228 aa11.62□□□□□ -0.55
PFN1-202ENST00000572383 GEMIN7Q9H840 131 aaKnown RBP11.62□□□□□ -0.55
PFN1-202ENST00000572383 SERF1AO75920 110 aa11.61□□□□□ -0.55
PFN1-202ENST00000572383 ATP5LO75964 103 aa11.61□□□□□ -0.55
PFN1-202ENST00000572383 LINC01561Q8N1V8 128 aa11.61□□□□□ -0.55
PFN1-202ENST00000572383 CAMK2N2Q96S95 79 aa11.61□□□□□ -0.55
PFN1-202ENST00000572383 CDKN2A-AS1Q9UH64 79 aa11.61□□□□□ -0.55
PFN1-202ENST00000572383 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.61□□□□□ -0.55
PFN1-202ENST00000572383 TINCRA0A1B0GVN0 87 aa11.6□□□□□ -0.55
PFN1-202ENST00000572383 PANO1I0J062 215 aa11.6□□□□□ -0.55
PFN1-202ENST00000572383 SMR3BP02814 79 aaPredicted RBP11.6□□□□□ -0.55
PFN1-202ENST00000572383 Q6ZRU5 148 aa11.6□□□□□ -0.55
PFN1-202ENST00000572383 SCXQ7RTU7 201 aa11.6□□□□□ -0.55
PFN1-202ENST00000572383 C2orf48Q96LS8 159 aa11.6□□□□□ -0.55
PFN1-202ENST00000572383 FAM229AH3BQW9 127 aa11.59□□□□□ -0.55
PFN1-202ENST00000572383 NUPR1O60356 82 aa11.59□□□□□ -0.55
PFN1-202ENST00000572383 CHAC1Q9BUX1 264 aa11.59□□□□□ -0.55
PFN1-202ENST00000572383 CHTF8P0CG12 524 aa11.58□□□□□ -0.56
PFN1-202ENST00000572383 KIAA0087Q14695 138 aa11.58□□□□□ -0.56
PFN1-202ENST00000572383 LINC00469Q8N7U9 141 aa11.58□□□□□ -0.56
PFN1-202ENST00000572383 HIST1H2BKO60814 126 aa11.57□□□□□ -0.56
PFN1-202ENST00000572383 HIST1H2BJP06899 126 aa11.57□□□□□ -0.56
PFN1-202ENST00000572383 INAFM2P0DMQ5 153 aa11.57□□□□□ -0.56
PFN1-202ENST00000572383 HIST1H2BOP23527 126 aa11.57□□□□□ -0.56
PFN1-202ENST00000572383 HIST1H2BBP33778 126 aa11.57□□□□□ -0.56
PFN1-202ENST00000572383 HIST1H2BDP58876 126 aa11.57□□□□□ -0.56
PFN1-202ENST00000572383 HIST1H2BCP62807 126 aa11.57□□□□□ -0.56
PFN1-202ENST00000572383 HIST2H2BEQ16778 126 aa11.57□□□□□ -0.56
PFN1-202ENST00000572383 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.57□□□□□ -0.56
PFN1-202ENST00000572383 CIRBP-AS1Q8TBR5 109 aa11.57□□□□□ -0.56
PFN1-202ENST00000572383 HIST1H2BHQ93079 126 aa11.57□□□□□ -0.56
PFN1-202ENST00000572383 HIST1H2BNQ99877 126 aa11.57□□□□□ -0.56
PFN1-202ENST00000572383 HIST1H2BMQ99879 126 aa11.57□□□□□ -0.56
PFN1-202ENST00000572383 IGLV5-45A0A087WSX0 123 aa11.56□□□□□ -0.56
PFN1-202ENST00000572383 IFI27L1Q96BM0 104 aa11.56□□□□□ -0.56
PFN1-202ENST00000572383 PACRGQ96M98 296 aaPredicted RBP11.56□□□□□ -0.56
PFN1-202ENST00000572383 IGLC3P0DOY3 106 aa11.55□□□□□ -0.56
PFN1-202ENST00000572383 C10orf25Q5T742 122 aa11.55□□□□□ -0.56
PFN1-202ENST00000572383 TOMM7Q9P0U1 55 aa11.55□□□□□ -0.56
PFN1-202ENST00000572383 IGKV2-24A0A0C4DH68 120 aa11.54□□□□□ -0.56
PFN1-202ENST00000572383 F8WDY8 70 aa11.54□□□□□ -0.56
PFN1-202ENST00000572383 NDUFA1O15239 70 aa11.54□□□□□ -0.56
PFN1-202ENST00000572383 CIRBPQ14011 172 aaKnown RBP11.54□□□□□ -0.56
PFN1-202ENST00000572383 UNQ6190/PRO20217Q6UXQ8 127 aa11.54□□□□□ -0.56
PFN1-202ENST00000572383 DMBT1Q9UGM3 2413 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms