RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 TRAV13-1A0A0B4J241 112 aa9.66□□□□□ -0.86
NPLOC4-207ENST00000572346 HSBP1O75506 76 aa9.66□□□□□ -0.86
NPLOC4-207ENST00000572346 HBDP02042 147 aa9.66□□□□□ -0.86
NPLOC4-207ENST00000572346 TEX43Q6ZNM6 134 aa9.66□□□□□ -0.86
NPLOC4-207ENST00000572346 ERASQ7Z444 233 aa9.66□□□□□ -0.86
NPLOC4-207ENST00000572346 CHCHD10Q8WYQ3 142 aaPredicted RBP9.66□□□□□ -0.86
NPLOC4-207ENST00000572346 C2orf88Q9BSF0 95 aa9.66□□□□□ -0.86
NPLOC4-207ENST00000572346 VCX2Q9H322 139 aa9.66□□□□□ -0.86
NPLOC4-207ENST00000572346 GAGE12HA6NDE8 117 aa9.65□□□□□ -0.86
NPLOC4-207ENST00000572346 IFITM10A6NMD0 228 aa9.65□□□□□ -0.86
NPLOC4-207ENST00000572346 C1orf196B1AJZ1 125 aa9.65□□□□□ -0.86
NPLOC4-207ENST00000572346 CCL25O15444 150 aa9.65□□□□□ -0.86
NPLOC4-207ENST00000572346 NPSP0C0P6 89 aa9.65□□□□□ -0.86
NPLOC4-207ENST00000572346 PMCHL1Q16048 86 aa9.65□□□□□ -0.86
NPLOC4-207ENST00000572346 TIMM17AQ99595 171 aa9.65□□□□□ -0.86
NPLOC4-207ENST00000572346 IGIPA6NJ69 53 aa9.64□□□□□ -0.87
NPLOC4-207ENST00000572346 XCL1P47992 114 aa9.64□□□□□ -0.87
NPLOC4-207ENST00000572346 KRTAP10-4P60372 401 aaPredicted RBP9.64□□□□□ -0.87
NPLOC4-207ENST00000572346 CHAC1Q9BUX1 264 aa9.64□□□□□ -0.87
NPLOC4-207ENST00000572346 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.63□□□□□ -0.87
NPLOC4-207ENST00000572346 HIST1H2BKO60814 126 aa9.63□□□□□ -0.87
NPLOC4-207ENST00000572346 SERF1AO75920 110 aa9.63□□□□□ -0.87
NPLOC4-207ENST00000572346 HIST1H2BJP06899 126 aa9.63□□□□□ -0.87
NPLOC4-207ENST00000572346 HIST1H2BOP23527 126 aa9.63□□□□□ -0.87
NPLOC4-207ENST00000572346 HIST1H2BBP33778 126 aa9.63□□□□□ -0.87
NPLOC4-207ENST00000572346 HIST1H2BDP58876 126 aa9.63□□□□□ -0.87
NPLOC4-207ENST00000572346 HIST1H2BCP62807 126 aa9.63□□□□□ -0.87
NPLOC4-207ENST00000572346 HIST2H2BEQ16778 126 aa9.63□□□□□ -0.87
NPLOC4-207ENST00000572346 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.63□□□□□ -0.87
NPLOC4-207ENST00000572346 HIST1H2BHQ93079 126 aa9.63□□□□□ -0.87
NPLOC4-207ENST00000572346 HIST1H2BNQ99877 126 aa9.63□□□□□ -0.87
NPLOC4-207ENST00000572346 HIST1H2BMQ99879 126 aa9.63□□□□□ -0.87
NPLOC4-207ENST00000572346 CIRBP-AS1Q8TBR5 109 aa9.62□□□□□ -0.87
NPLOC4-207ENST00000572346 FAM104AQ969W3 186 aa9.62□□□□□ -0.87
NPLOC4-207ENST00000572346 A0A096LNJ9 63 aa9.61□□□□□ -0.87
NPLOC4-207ENST00000572346 ATP5LO75964 103 aa9.61□□□□□ -0.87
NPLOC4-207ENST00000572346 ZC2HC1BQ5TFG8 222 aa9.61□□□□□ -0.87
NPLOC4-207ENST00000572346 KRTAP26-1Q6PEX3 210 aa9.61□□□□□ -0.87
NPLOC4-207ENST00000572346 CD164L2Q6UWJ8 174 aa9.61□□□□□ -0.87
NPLOC4-207ENST00000572346 LRP1Q07954 4544 aaKnown RBP9.61□□□□□ -0.87
NPLOC4-207ENST00000572346 NDUFA6P56556 154 aa9.6□□□□□ -0.87
NPLOC4-207ENST00000572346 C14orf177Q52M58 125 aa9.6□□□□□ -0.87
NPLOC4-207ENST00000572346 SERTAD4-AS1Q5TG53 156 aa9.6□□□□□ -0.87
NPLOC4-207ENST00000572346 CFAP161Q6P656 301 aa9.6□□□□□ -0.87
NPLOC4-207ENST00000572346 FAM19A2Q8N3H0 131 aa9.6□□□□□ -0.87
NPLOC4-207ENST00000572346 AMELXQ99217 191 aa9.6□□□□□ -0.87
NPLOC4-207ENST00000572346 USP17L23D6RBM5 183 aa9.59□□□□□ -0.87
NPLOC4-207ENST00000572346 PDZD11Q5EBL8 140 aa9.59□□□□□ -0.87
NPLOC4-207ENST00000572346 OXTP01178 125 aa9.58□□□□□ -0.88
NPLOC4-207ENST00000572346 MALP21145 153 aa9.58□□□□□ -0.88
NPLOC4-207ENST00000572346 UBE2D1P51668 147 aa9.58□□□□□ -0.88
NPLOC4-207ENST00000572346 FOXI1Q12951 378 aa9.58□□□□□ -0.88
NPLOC4-207ENST00000572346 PMVKQ15126 192 aa9.58□□□□□ -0.88
NPLOC4-207ENST00000572346 LINC00173Q6ZV60 143 aa9.58□□□□□ -0.88
NPLOC4-207ENST00000572346 COX7A2LO14548 114 aa9.57□□□□□ -0.88
NPLOC4-207ENST00000572346 NUPR1O60356 82 aa9.57□□□□□ -0.88
NPLOC4-207ENST00000572346 PRSS1P07477 247 aa9.57□□□□□ -0.88
NPLOC4-207ENST00000572346 LINC00310P59036 64 aa9.57□□□□□ -0.88
NPLOC4-207ENST00000572346 SEC11AP67812 179 aa9.57□□□□□ -0.88
NPLOC4-207ENST00000572346 C5orf38Q86SI9 138 aa9.57□□□□□ -0.88
NPLOC4-207ENST00000572346 HMCN2Q8NDA2 5059 aa9.56□□□□□ -0.88
NPLOC4-207ENST00000572346 LEPROTL1O95214 131 aa9.56□□□□□ -0.88
NPLOC4-207ENST00000572346 LINC00242Q5T6M2 205 aa9.56□□□□□ -0.88
NPLOC4-207ENST00000572346 IFI27L1Q96BM0 104 aa9.56□□□□□ -0.88
NPLOC4-207ENST00000572346 GEMIN7Q9H840 131 aaKnown RBP9.56□□□□□ -0.88
NPLOC4-207ENST00000572346 IGHV1-58A0A0C4DH39 117 aa9.55□□□□□ -0.88
NPLOC4-207ENST00000572346 hDV102S1A0JD36 115 aa9.55□□□□□ -0.88
NPLOC4-207ENST00000572346 APOMO95445 188 aa9.55□□□□□ -0.88
NPLOC4-207ENST00000572346 FABP4P15090 132 aa9.55□□□□□ -0.88
NPLOC4-207ENST00000572346 CST9LQ9H4G1 147 aa9.55□□□□□ -0.88
NPLOC4-207ENST00000572346 FAT3Q8TDW7 4589 aa9.55□□□□□ -0.88
NPLOC4-207ENST00000572346 A0A0J9YXV3 536 aa9.54□□□□□ -0.88
NPLOC4-207ENST00000572346 HERVK_113P63121 156 aa9.54□□□□□ -0.88
NPLOC4-207ENST00000572346 HSPB8Q9UJY1 196 aa9.54□□□□□ -0.88
NPLOC4-207ENST00000572346 IGHV3OR16-9A0A0B4J2B5 98 aa9.53□□□□□ -0.88
NPLOC4-207ENST00000572346 COX6A2Q02221 97 aa9.53□□□□□ -0.88
NPLOC4-207ENST00000572346 HIGD2BQ4VC39 106 aa9.53□□□□□ -0.88
NPLOC4-207ENST00000572346 RPL37AP61513 92 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-207ENST00000572346 C15orf56Q8N910 161 aa9.52□□□□□ -0.89
NPLOC4-207ENST00000572346 TINCRA0A1B0GVN0 87 aa9.51□□□□□ -0.89
NPLOC4-207ENST00000572346 H0Y8G0 127 aa9.51□□□□□ -0.89
NPLOC4-207ENST00000572346 ZNF561-AS1K7EIQ3 104 aa9.51□□□□□ -0.89
NPLOC4-207ENST00000572346 S100A6P06703 90 aa9.51□□□□□ -0.89
NPLOC4-207ENST00000572346 COA6Q5JTJ3 125 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-207ENST00000572346 FAM19A3Q7Z5A8 133 aa9.51□□□□□ -0.89
NPLOC4-207ENST00000572346 LINC00469Q8N7U9 141 aa9.51□□□□□ -0.89
NPLOC4-207ENST00000572346 PACRGQ96M98 296 aaPredicted RBP9.51□□□□□ -0.89
NPLOC4-207ENST00000572346 CHTOPQ9Y3Y2 248 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-207ENST00000572346 A0A087WZ39 114 aa9.5□□□□□ -0.89
NPLOC4-207ENST00000572346 HNRNPA3P51991 378 aaKnown RBP9.5□□□□□ -0.89
NPLOC4-207ENST00000572346 ORAOV1Q8WV07 137 aa9.5□□□□□ -0.89
NPLOC4-207ENST00000572346 PLA2G2DQ9UNK4 145 aa9.5□□□□□ -0.89
NPLOC4-207ENST00000572346 PKHD1L1Q86WI1 4243 aa9.49□□□□□ -0.89
NPLOC4-207ENST00000572346 GVQW2A0A096LPI5 108 aaPredicted RBP9.49□□□□□ -0.89
NPLOC4-207ENST00000572346 TRAV12-1A0A0B4J245 112 aa9.49□□□□□ -0.89
NPLOC4-207ENST00000572346 C9orf163Q8N9P6 203 aa9.49□□□□□ -0.89
NPLOC4-207ENST00000572346 MAP1LC3CQ9BXW4 147 aa9.49□□□□□ -0.89
NPLOC4-207ENST00000572346 CDKN2A-AS1Q9UH64 79 aa9.49□□□□□ -0.89
NPLOC4-207ENST00000572346 UBR4Q5T4S7 5183 aa9.49□□□□□ -0.89
NPLOC4-207ENST00000572346 IGHV3-64A0A075B6Q5 118 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms