RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 IGKV2-29A2NJV5 120 aaPredicted RBP11.83□□□□□ -0.52
LINC01238-205ENST00000567549 SERF1AO75920 110 aa11.83□□□□□ -0.52
LINC01238-205ENST00000567549 PPP1R17O96001 155 aa11.83□□□□□ -0.52
LINC01238-205ENST00000567549 CHCHD1Q96BP2 118 aaKnown RBP11.83□□□□□ -0.52
LINC01238-205ENST00000567549 AKR1D1P51857 326 aa11.82□□□□□ -0.52
LINC01238-205ENST00000567549 COX6A2Q02221 97 aa11.82□□□□□ -0.52
LINC01238-205ENST00000567549 SS18Q15532 418 aa11.82□□□□□ -0.52
LINC01238-205ENST00000567549 HIGD2BQ4VC39 106 aa11.82□□□□□ -0.52
LINC01238-205ENST00000567549 IGHV1-58A0A0C4DH39 117 aa11.81□□□□□ -0.52
LINC01238-205ENST00000567549 SLPIP03973 132 aa11.81□□□□□ -0.52
LINC01238-205ENST00000567549 LINC00614P0C842 121 aa11.81□□□□□ -0.52
LINC01238-205ENST00000567549 MAJINQ3KP22 176 aa11.81□□□□□ -0.52
LINC01238-205ENST00000567549 PDZD11Q5EBL8 140 aa11.81□□□□□ -0.52
LINC01238-205ENST00000567549 PRSS3P2Q8NHM4 247 aa11.81□□□□□ -0.52
LINC01238-205ENST00000567549 HIST1H2BLQ99880 126 aa11.81□□□□□ -0.52
LINC01238-205ENST00000567549 CHTF8P0CG12 524 aa11.8□□□□□ -0.52
LINC01238-205ENST00000567549 HNRNPA3P51991 378 aaKnown RBP11.8□□□□□ -0.52
LINC01238-205ENST00000567549 MAP1LC3AQ9H492 121 aa11.8□□□□□ -0.52
LINC01238-205ENST00000567549 IFITM10A6NMD0 228 aa11.79□□□□□ -0.52
LINC01238-205ENST00000567549 PRSS47A8MTI9 375 aa11.79□□□□□ -0.52
LINC01238-205ENST00000567549 CCL25O15444 150 aa11.79□□□□□ -0.52
LINC01238-205ENST00000567549 NUPR1O60356 82 aa11.79□□□□□ -0.52
LINC01238-205ENST00000567549 HSBP1O75506 76 aa11.79□□□□□ -0.52
LINC01238-205ENST00000567549 TNFRSF6BO95407 300 aa11.79□□□□□ -0.52
LINC01238-205ENST00000567549 FABP4P15090 132 aa11.79□□□□□ -0.52
LINC01238-205ENST00000567549 XCL1P47992 114 aa11.79□□□□□ -0.52
LINC01238-205ENST00000567549 IGKV2-24A0A0C4DH68 120 aa11.78□□□□□ -0.52
LINC01238-205ENST00000567549 SMKR1H3BMG3 65 aa11.78□□□□□ -0.52
LINC01238-205ENST00000567549 ZNF561-AS1K7EIQ3 104 aa11.78□□□□□ -0.52
LINC01238-205ENST00000567549 LINC00310P59036 64 aa11.78□□□□□ -0.52
LINC01238-205ENST00000567549 FOXI1Q12951 378 aa11.78□□□□□ -0.52
LINC01238-205ENST00000567549 FA2HQ7L5A8 372 aa11.78□□□□□ -0.52
LINC01238-205ENST00000567549 MRPL52Q86TS9 123 aaKnown RBP11.78□□□□□ -0.52
LINC01238-205ENST00000567549 STPG4Q8N801 248 aa11.78□□□□□ -0.52
LINC01238-205ENST00000567549 LINC00959A0A1B0GUT2 108 aa11.77□□□□□ -0.53
LINC01238-205ENST00000567549 NPYP01303 97 aa11.77□□□□□ -0.53
LINC01238-205ENST00000567549 FCER1GP30273 86 aa11.77□□□□□ -0.53
LINC01238-205ENST00000567549 OR10D4PQ8NGN7 298 aa11.77□□□□□ -0.53
LINC01238-205ENST00000567549 CARD19Q96LW7 228 aa11.77□□□□□ -0.53
LINC01238-205ENST00000567549 C20orf78Q9BR46 151 aa11.77□□□□□ -0.53
LINC01238-205ENST00000567549 NXT2Q9NPJ8 142 aaKnown RBP11.77□□□□□ -0.53
LINC01238-205ENST00000567549 LRP1Q07954 4544 aaKnown RBP11.76□□□□□ -0.53
LINC01238-205ENST00000567549 TRBV27A0A0K0K1C4 114 aa11.76□□□□□ -0.53
LINC01238-205ENST00000567549 CD164L2Q6UWJ8 174 aa11.76□□□□□ -0.53
LINC01238-205ENST00000567549 NRACQ8N912 160 aa11.76□□□□□ -0.53
LINC01238-205ENST00000567549 KIR2DL4Q99706 377 aa11.76□□□□□ -0.53
LINC01238-205ENST00000567549 LOC389332A0A1B0GUA5 103 aa11.75□□□□□ -0.53
LINC01238-205ENST00000567549 VCYO14598 125 aa11.75□□□□□ -0.53
LINC01238-205ENST00000567549 IFI27P40305 119 aaPredicted RBP11.75□□□□□ -0.53
LINC01238-205ENST00000567549 TSHBP01222 138 aa11.74□□□□□ -0.53
LINC01238-205ENST00000567549 MALP21145 153 aa11.74□□□□□ -0.53
LINC01238-205ENST00000567549 ZNF664Q8N3J9 261 aa11.74□□□□□ -0.53
LINC01238-205ENST00000567549 Q8N8P6 123 aa11.74□□□□□ -0.53
LINC01238-205ENST00000567549 URB1-AS1Q96HZ7 61 aa11.74□□□□□ -0.53
LINC01238-205ENST00000567549 LINC01546A6NGU7 62 aa11.73□□□□□ -0.53
LINC01238-205ENST00000567549 TCAPO15273 167 aa11.73□□□□□ -0.53
LINC01238-205ENST00000567549 POLR2KP53803 58 aaKnown RBP11.73□□□□□ -0.53
LINC01238-205ENST00000567549 CDC42SE2Q9NRR3 84 aa11.73□□□□□ -0.53
LINC01238-205ENST00000567549 FAT3Q8TDW7 4589 aa11.72□□□□□ -0.53
LINC01238-205ENST00000567549 PKHD1L1Q86WI1 4243 aa11.72□□□□□ -0.53
LINC01238-205ENST00000567549 K7EMI3 77 aa11.72□□□□□ -0.53
LINC01238-205ENST00000567549 GAS8-AS1O95177 125 aa11.72□□□□□ -0.53
LINC01238-205ENST00000567549 RPL32P62910 135 aaKnown RBP11.72□□□□□ -0.53
LINC01238-205ENST00000567549 PRR3P79522 188 aaKnown RBP11.72□□□□□ -0.53
LINC01238-205ENST00000567549 SYCNQ0VAF6 134 aa11.72□□□□□ -0.53
LINC01238-205ENST00000567549 REG3GQ6UW15 175 aa11.72□□□□□ -0.53
LINC01238-205ENST00000567549 CSDC2Q9Y534 153 aaKnown RBP11.72□□□□□ -0.53
LINC01238-205ENST00000567549 HMCN2Q8NDA2 5059 aa11.71□□□□□ -0.53
LINC01238-205ENST00000567549 A0A096LNI7 61 aa11.71□□□□□ -0.53
LINC01238-205ENST00000567549 SUMO2P61956 95 aaKnown RBP11.71□□□□□ -0.53
LINC01238-205ENST00000567549 FAM19A2Q8N3H0 131 aa11.71□□□□□ -0.53
LINC01238-205ENST00000567549 COX7A2LO14548 114 aa11.7□□□□□ -0.54
LINC01238-205ENST00000567549 APOMO95445 188 aa11.7□□□□□ -0.54
LINC01238-205ENST00000567549 SMIM6P0DI80 62 aa11.7□□□□□ -0.54
LINC01238-205ENST00000567549 MT1HL1P0DM35 61 aa11.7□□□□□ -0.54
LINC01238-205ENST00000567549 LOC107984640A0A0U1RRK4 108 aa11.69□□□□□ -0.54
LINC01238-205ENST00000567549 SPINK6Q6UWN8 80 aa11.69□□□□□ -0.54
LINC01238-205ENST00000567549 SMIM2Q9BVW6 85 aa11.69□□□□□ -0.54
LINC01238-205ENST00000567549 HSPB8Q9UJY1 196 aa11.69□□□□□ -0.54
LINC01238-205ENST00000567549 G0S2P27469 103 aa11.68□□□□□ -0.54
LINC01238-205ENST00000567549 JOSD1Q15040 202 aaPredicted RBP11.68□□□□□ -0.54
LINC01238-205ENST00000567549 Q6ZRP5 223 aa11.68□□□□□ -0.54
LINC01238-205ENST00000567549 IGLV4-69A0A075B6H9 119 aa11.67□□□□□ -0.54
LINC01238-205ENST00000567549 LEPROTL1O95214 131 aa11.67□□□□□ -0.54
LINC01238-205ENST00000567549 LINC00518Q8N0U6 118 aa11.67□□□□□ -0.54
LINC01238-205ENST00000567549 LINC01600Q96MT4 127 aa11.67□□□□□ -0.54
LINC01238-205ENST00000567549 HBDP02042 147 aa11.66□□□□□ -0.54
LINC01238-205ENST00000567549 ORMDL2Q53FV1 153 aa11.66□□□□□ -0.54
LINC01238-205ENST00000567549 CAMK2N2Q96S95 79 aa11.66□□□□□ -0.54
LINC01238-205ENST00000567549 TIMM21Q9BVV7 248 aa11.66□□□□□ -0.54
LINC01238-205ENST00000567549 PTTG1IPP53801 180 aa11.65□□□□□ -0.54
LINC01238-205ENST00000567549 C2orf48Q96LS8 159 aa11.65□□□□□ -0.54
LINC01238-205ENST00000567549 LINC01549A6NIU2 74 aa11.64□□□□□ -0.55
LINC01238-205ENST00000567549 PMCHL1Q16048 86 aa11.64□□□□□ -0.55
LINC01238-205ENST00000567549 PYY3Q5JQD4 70 aa11.64□□□□□ -0.55
LINC01238-205ENST00000567549 C12orf57Q99622 126 aa11.64□□□□□ -0.55
LINC01238-205ENST00000567549 UBE2D4Q9Y2X8 147 aa11.64□□□□□ -0.55
LINC01238-205ENST00000567549 TRAV13-1A0A0B4J241 112 aa11.63□□□□□ -0.55
LINC01238-205ENST00000567549 F8WDY8 70 aa11.63□□□□□ -0.55
LINC01238-205ENST00000567549 KRTDAPP60985 99 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms