RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 UQCR10Q9UDW1 63 aa12.7□□□□□ -0.38
COMMD4-213ENST00000565834 PLECQ15149 4684 aaKnown RBP12.7□□□□□ -0.38
COMMD4-213ENST00000565834 CCL25O15444 150 aa12.7□□□□□ -0.38
COMMD4-213ENST00000565834 CRPP02741 224 aa12.7□□□□□ -0.38
COMMD4-213ENST00000565834 SPATA45Q537H7 98 aa12.7□□□□□ -0.38
COMMD4-213ENST00000565834 LINC00469Q8N7U9 141 aa12.7□□□□□ -0.38
COMMD4-213ENST00000565834 COX6A2Q02221 97 aa12.69□□□□□ -0.38
COMMD4-213ENST00000565834 Q9H8V8 135 aa12.69□□□□□ -0.38
COMMD4-213ENST00000565834 UBE2WQ96B02 151 aa12.68□□□□□ -0.38
COMMD4-213ENST00000565834 IGLV5-45A0A087WSX0 123 aa12.67□□□□□ -0.38
COMMD4-213ENST00000565834 ANKRD39Q53RE8 183 aa12.67□□□□□ -0.38
COMMD4-213ENST00000565834 ENHOQ6UWT2 76 aa12.67□□□□□ -0.38
COMMD4-213ENST00000565834 CDKN2A-AS1Q9UH64 79 aa12.67□□□□□ -0.38
COMMD4-213ENST00000565834 HERVK_113P61574 105 aa12.67□□□□□ -0.38
COMMD4-213ENST00000565834 IGLV10-54A0A075B6I4 117 aa12.66□□□□□ -0.38
COMMD4-213ENST00000565834 H3BRM9 83 aa12.66□□□□□ -0.38
COMMD4-213ENST00000565834 XCL1P47992 114 aa12.66□□□□□ -0.38
COMMD4-213ENST00000565834 TMEM223A0PJW6 202 aa12.65□□□□□ -0.38
COMMD4-213ENST00000565834 MIAQ16674 131 aa12.65□□□□□ -0.38
COMMD4-213ENST00000565834 C10orf126Q8N4M7 172 aa12.65□□□□□ -0.38
COMMD4-213ENST00000565834 CHCHD10Q8WYQ3 142 aaPredicted RBP12.65□□□□□ -0.38
COMMD4-213ENST00000565834 SNHG12Q9BXW3 62 aa12.65□□□□□ -0.38
COMMD4-213ENST00000565834 LYSTQ99698 3801 aa12.64□□□□□ -0.39
COMMD4-213ENST00000565834 TRAV8-4A0A0B4J246 113 aa12.64□□□□□ -0.39
COMMD4-213ENST00000565834 IGHV3OR16-9A0A0B4J2B5 98 aa12.63□□□□□ -0.39
COMMD4-213ENST00000565834 CD164L2Q6UWJ8 174 aa12.63□□□□□ -0.39
COMMD4-213ENST00000565834 E9PLD3 99 aa12.62□□□□□ -0.39
COMMD4-213ENST00000565834 C3orf84H3BNL1 204 aa12.62□□□□□ -0.39
COMMD4-213ENST00000565834 K7EP13 123 aa12.62□□□□□ -0.39
COMMD4-213ENST00000565834 SPINK8P0C7L1 97 aa12.62□□□□□ -0.39
COMMD4-213ENST00000565834 NMUP48645 174 aa12.62□□□□□ -0.39
COMMD4-213ENST00000565834 CASC10Q5T4H9 136 aa12.62□□□□□ -0.39
COMMD4-213ENST00000565834 IGKV2D-26A0A0A0MRZ7 120 aa12.61□□□□□ -0.39
COMMD4-213ENST00000565834 A0A1B0GV90 55 aa12.61□□□□□ -0.39
COMMD4-213ENST00000565834 IBA57-AS1B1ANH7 110 aa12.61□□□□□ -0.39
COMMD4-213ENST00000565834 IGHV3-64A0A075B6Q5 118 aa12.61□□□□□ -0.39
COMMD4-213ENST00000565834 EREGO14944 169 aa12.61□□□□□ -0.39
COMMD4-213ENST00000565834 HNRNPA3P51991 378 aaKnown RBP12.61□□□□□ -0.39
COMMD4-213ENST00000565834 A0A087WZ39 114 aa12.6□□□□□ -0.39
COMMD4-213ENST00000565834 TRAV8-3A0A0A6YYJ7 113 aa12.6□□□□□ -0.39
COMMD4-213ENST00000565834 C5orf38Q86SI9 138 aa12.6□□□□□ -0.39
COMMD4-213ENST00000565834 GAGE12HA6NDE8 117 aa12.59□□□□□ -0.39
COMMD4-213ENST00000565834 Q9HAA7 133 aa12.59□□□□□ -0.39
COMMD4-213ENST00000565834 IGHV1-58A0A0C4DH39 117 aa12.58□□□□□ -0.4
COMMD4-213ENST00000565834 SMIM1B2RUZ4 78 aa12.58□□□□□ -0.4
COMMD4-213ENST00000565834 COX7A2LO14548 114 aa12.58□□□□□ -0.4
COMMD4-213ENST00000565834 LEPROTO15243 131 aa12.58□□□□□ -0.4
COMMD4-213ENST00000565834 FOXI1Q12951 378 aa12.58□□□□□ -0.4
COMMD4-213ENST00000565834 C1orf43Q9BWL3 253 aa12.58□□□□□ -0.4
COMMD4-213ENST00000565834 COL5A1-AS1Q5SY13 56 aa12.57□□□□□ -0.4
COMMD4-213ENST00000565834 PLEKHB2Q96CS7 222 aa12.57□□□□□ -0.4
COMMD4-213ENST00000565834 COX8AP10176 69 aa12.57□□□□□ -0.4
COMMD4-213ENST00000565834 VPS13DQ5THJ4 4388 aa12.56□□□□□ -0.4
COMMD4-213ENST00000565834 IGKV2D-24A0A075B6R9 120 aa12.56□□□□□ -0.4
COMMD4-213ENST00000565834 IGLV5-39A0A0G2JS06 123 aa12.56□□□□□ -0.4
COMMD4-213ENST00000565834 PCP2Q8IVA1 136 aa12.56□□□□□ -0.4
COMMD4-213ENST00000565834 J3QQQ9 107 aa12.55□□□□□ -0.4
COMMD4-213ENST00000565834 TTC32Q5I0X7 151 aa12.55□□□□□ -0.4
COMMD4-213ENST00000565834 LINC01561Q8N1V8 128 aa12.55□□□□□ -0.4
COMMD4-213ENST00000565834 KRTAP1-5Q9BYS1 174 aa12.55□□□□□ -0.4
COMMD4-213ENST00000565834 DNAH1Q9P2D7 4330 aa12.55□□□□□ -0.4
COMMD4-213ENST00000565834 LGALS3P17931 250 aaKnown RBP12.54□□□□□ -0.4
COMMD4-213ENST00000565834 MALP21145 153 aa12.54□□□□□ -0.4
COMMD4-213ENST00000565834 TSPEAR-AS2P59090 65 aa12.54□□□□□ -0.4
COMMD4-213ENST00000565834 SLC25A34Q6PIV7 304 aa12.54□□□□□ -0.4
COMMD4-213ENST00000565834 RMI2Q96E14 147 aa12.54□□□□□ -0.4
COMMD4-213ENST00000565834 TTTY13Q9BZ97 58 aa12.54□□□□□ -0.4
COMMD4-213ENST00000565834 KRTAP26-1Q6PEX3 210 aa12.54□□□□□ -0.4
COMMD4-213ENST00000565834 NBDYA0A0U1RRE5 68 aa12.53□□□□□ -0.4
COMMD4-213ENST00000565834 BOD1L2Q8IYS8 172 aa12.52□□□□□ -0.4
COMMD4-213ENST00000565834 TP73-AS1Q9UF72 201 aa12.51□□□□□ -0.41
COMMD4-213ENST00000565834 ZNF815PA8K554 130 aa12.51□□□□□ -0.41
COMMD4-213ENST00000565834 APOMO95445 188 aa12.51□□□□□ -0.41
COMMD4-213ENST00000565834 MAPKAPK5-AS1Q8N8E1 139 aa12.51□□□□□ -0.41
COMMD4-213ENST00000565834 TOMM7Q9P0U1 55 aa12.51□□□□□ -0.41
COMMD4-213ENST00000565834 DLEU1O43261 78 aa12.5□□□□□ -0.41
COMMD4-213ENST00000565834 LY6G6CO95867 125 aa12.5□□□□□ -0.41
COMMD4-213ENST00000565834 COX7B2Q8TF08 81 aa12.5□□□□□ -0.41
COMMD4-213ENST00000565834 MYMXA0A1B0GTQ4 84 aa12.49□□□□□ -0.41
COMMD4-213ENST00000565834 ORAOV1Q8WV07 137 aa12.49□□□□□ -0.41
COMMD4-213ENST00000565834 LINC00476Q8WZB0 136 aa12.49□□□□□ -0.41
COMMD4-213ENST00000565834 COX11Q9Y6N1 276 aa12.49□□□□□ -0.41
COMMD4-213ENST00000565834 NDUFA12Q9UI09 145 aa12.48□□□□□ -0.41
COMMD4-213ENST00000565834 TM2D2Q9BX73 214 aa12.48□□□□□ -0.41
COMMD4-213ENST00000565834 PRSS2P07478 247 aa12.47□□□□□ -0.41
COMMD4-213ENST00000565834 Q8IZM0 81 aa12.47□□□□□ -0.41
COMMD4-213ENST00000565834 ALMS1Q8TCU4 4167 aa12.46□□□□□ -0.41
COMMD4-213ENST00000565834 BATFQ16520 125 aa12.46□□□□□ -0.41
COMMD4-213ENST00000565834 M0R2N4 97 aa12.45□□□□□ -0.42
COMMD4-213ENST00000565834 NDUFA1O15239 70 aa12.45□□□□□ -0.42
COMMD4-213ENST00000565834 C6orf226Q5I0X4 101 aa12.45□□□□□ -0.42
COMMD4-213ENST00000565834 CFAP161Q6P656 301 aa12.45□□□□□ -0.42
COMMD4-213ENST00000565834 SPAG11BQ08648 103 aa12.44□□□□□ -0.42
COMMD4-213ENST00000565834 SCGB1D4Q6XE38 83 aa12.44□□□□□ -0.42
COMMD4-213ENST00000565834 KIAA0087Q14695 138 aa12.43□□□□□ -0.42
COMMD4-213ENST00000565834 ZNF625Q96I27 306 aaPredicted RBP12.43□□□□□ -0.42
COMMD4-213ENST00000565834 C2orf91Q6ZV80 131 aa12.42□□□□□ -0.42
COMMD4-213ENST00000565834 C15orf56Q8N910 161 aa12.42□□□□□ -0.42
COMMD4-213ENST00000565834 PSCAO43653 123 aa12.42□□□□□ -0.42
COMMD4-213ENST00000565834 Q6ZR54 194 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 163.9 ms