RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 CAMPP49913 170 aa7.63□□□□□ -1.19
GTF3C1-204ENST00000564664 PRR3P79522 188 aaKnown RBP7.63□□□□□ -1.19
GTF3C1-204ENST00000564664 MRPL51Q4U2R6 128 aaKnown RBP7.63□□□□□ -1.19
GTF3C1-204ENST00000564664 ANAPC16Q96DE5 110 aa7.63□□□□□ -1.19
GTF3C1-204ENST00000564664 C2orf48Q96LS8 159 aa7.63□□□□□ -1.19
GTF3C1-204ENST00000564664 LINC01600Q96MT4 127 aa7.63□□□□□ -1.19
GTF3C1-204ENST00000564664 IGLV4-69A0A075B6H9 119 aa7.62□□□□□ -1.19
GTF3C1-204ENST00000564664 LOC107984640A0A0U1RRK4 108 aa7.62□□□□□ -1.19
GTF3C1-204ENST00000564664 F8WDY8 70 aa7.62□□□□□ -1.19
GTF3C1-204ENST00000564664 SMKR1H3BMG3 65 aa7.62□□□□□ -1.19
GTF3C1-204ENST00000564664 CKS2P33552 79 aa7.62□□□□□ -1.19
GTF3C1-204ENST00000564664 ADIRFQ15847 76 aa7.62□□□□□ -1.19
GTF3C1-204ENST00000564664 SPINK6Q6UWN8 80 aa7.62□□□□□ -1.19
GTF3C1-204ENST00000564664 IMMP2LQ96T52 175 aa7.62□□□□□ -1.19
GTF3C1-204ENST00000564664 C5orf52A6NGY3 159 aa7.61□□□□□ -1.19
GTF3C1-204ENST00000564664 PTTG1IPP53801 180 aa7.61□□□□□ -1.19
GTF3C1-204ENST00000564664 RNF151Q2KHN1 245 aa7.61□□□□□ -1.19
GTF3C1-204ENST00000564664 Q6ZRP5 223 aa7.61□□□□□ -1.19
GTF3C1-204ENST00000564664 LINC00526Q96FQ7 95 aa7.61□□□□□ -1.19
GTF3C1-204ENST00000564664 TRAV13-1A0A0B4J241 112 aa7.6□□□□□ -1.19
GTF3C1-204ENST00000564664 PPBPP02775 128 aa7.6□□□□□ -1.19
GTF3C1-204ENST00000564664 REG3GQ6UW15 175 aa7.6□□□□□ -1.19
GTF3C1-204ENST00000564664 CAMK2N2Q96S95 79 aa7.6□□□□□ -1.19
GTF3C1-204ENST00000564664 UBR4Q5T4S7 5183 aa7.6□□□□□ -1.19
GTF3C1-204ENST00000564664 TNFRSF6BO95407 300 aa7.59□□□□□ -1.19
GTF3C1-204ENST00000564664 SRSF9Q13242 221 aaKnown RBP eCLIP7.59□□□□□ -1.19
GTF3C1-204ENST00000564664 OR10D4PQ8NGN7 298 aa7.59□□□□□ -1.19
GTF3C1-204ENST00000564664 SPANXA1Q9NS26 97 aa7.59□□□□□ -1.19
GTF3C1-204ENST00000564664 TRAV9-1A0A075B6T8 112 aa7.58□□□□□ -1.2
GTF3C1-204ENST00000564664 HBBP68871 147 aa7.58□□□□□ -1.2
GTF3C1-204ENST00000564664 MRPS36P82909 103 aaKnown RBP7.58□□□□□ -1.2
GTF3C1-204ENST00000564664 GAGE2BQ13066 116 aa7.58□□□□□ -1.2
GTF3C1-204ENST00000564664 LINC00518Q8N0U6 118 aa7.58□□□□□ -1.2
GTF3C1-204ENST00000564664 A0A0J9YXV3 536 aa7.57□□□□□ -1.2
GTF3C1-204ENST00000564664 S100A6P06703 90 aa7.57□□□□□ -1.2
GTF3C1-204ENST00000564664 C5orf38Q86SI9 138 aa7.57□□□□□ -1.2
GTF3C1-204ENST00000564664 SMIM2Q9BVW6 85 aa7.57□□□□□ -1.2
GTF3C1-204ENST00000564664 IGHV3OR16-9A0A0B4J2B5 98 aa7.56□□□□□ -1.2
GTF3C1-204ENST00000564664 A0A1B0GXF2 115 aa7.56□□□□□ -1.2
GTF3C1-204ENST00000564664 D6R8Y8 96 aa7.56□□□□□ -1.2
GTF3C1-204ENST00000564664 RNASE13Q5GAN3 156 aaKnown RBP7.56□□□□□ -1.2
GTF3C1-204ENST00000564664 Q6ZUT4 128 aa7.56□□□□□ -1.2
GTF3C1-204ENST00000564664 ATP5L2Q7Z4Y8 100 aa7.56□□□□□ -1.2
GTF3C1-204ENST00000564664 MRPL35Q9NZE8 188 aaKnown RBP7.56□□□□□ -1.2
GTF3C1-204ENST00000564664 A0A1W2PNN7 141 aa7.55□□□□□ -1.2
GTF3C1-204ENST00000564664 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.55□□□□□ -1.2
GTF3C1-204ENST00000564664 S100PP25815 95 aa7.55□□□□□ -1.2
GTF3C1-204ENST00000564664 KRTAP10-8P60410 259 aa7.55□□□□□ -1.2
GTF3C1-204ENST00000564664 S100A12P80511 92 aa7.55□□□□□ -1.2
GTF3C1-204ENST00000564664 SPAG11BQ08648 103 aa7.55□□□□□ -1.2
GTF3C1-204ENST00000564664 ORMDL3Q8N138 153 aa7.55□□□□□ -1.2
GTF3C1-204ENST00000564664 PYGO1Q9Y3Y4 419 aa7.55□□□□□ -1.2
GTF3C1-204ENST00000564664 PRSS47A8MTI9 375 aa7.54□□□□□ -1.2
GTF3C1-204ENST00000564664 SMIM6P0DI80 62 aa7.54□□□□□ -1.2
GTF3C1-204ENST00000564664 RPL39P62891 51 aaKnown RBP7.54□□□□□ -1.2
GTF3C1-204ENST00000564664 C9orf116Q5BN46 136 aaPredicted RBP7.54□□□□□ -1.2
GTF3C1-204ENST00000564664 COA6Q5JTJ3 125 aaKnown RBP7.54□□□□□ -1.2
GTF3C1-204ENST00000564664 MRPL54Q6P161 138 aaKnown RBP7.54□□□□□ -1.2
GTF3C1-204ENST00000564664 TMEM136Q6ZRR5 245 aa7.54□□□□□ -1.2
GTF3C1-204ENST00000564664 FAM104AQ969W3 186 aa7.54□□□□□ -1.2
GTF3C1-204ENST00000564664 LAMTOR2Q9Y2Q5 125 aa7.54□□□□□ -1.2
GTF3C1-204ENST00000564664 TNXBP22105 4242 aa7.54□□□□□ -1.2
GTF3C1-204ENST00000564664 NDUFA1O15239 70 aa7.53□□□□□ -1.2
GTF3C1-204ENST00000564664 NPYP01303 97 aa7.53□□□□□ -1.2
GTF3C1-204ENST00000564664 TLX1NBP0CAT3 122 aa7.53□□□□□ -1.2
GTF3C1-204ENST00000564664 IFI27P40305 119 aaPredicted RBP7.53□□□□□ -1.2
GTF3C1-204ENST00000564664 IFITM10A6NMD0 228 aa7.52□□□□□ -1.21
GTF3C1-204ENST00000564664 SNRPEP62304 92 aaKnown RBP7.52□□□□□ -1.21
GTF3C1-204ENST00000564664 RPL18AQ02543 176 aaKnown RBP7.52□□□□□ -1.21
GTF3C1-204ENST00000564664 COX19Q49B96 90 aa7.52□□□□□ -1.21
GTF3C1-204ENST00000564664 ORAOV1Q8WV07 137 aa7.52□□□□□ -1.21
GTF3C1-204ENST00000564664 PRELID3AQ96N28 172 aa7.52□□□□□ -1.21
GTF3C1-204ENST00000564664 OPRPNQ99935 248 aaPredicted RBP7.52□□□□□ -1.21
GTF3C1-204ENST00000564664 TGIF2-C20orf24A0A0A6YYL0 155 aa7.51□□□□□ -1.21
GTF3C1-204ENST00000564664 MT-ND6P03923 174 aa7.51□□□□□ -1.21
GTF3C1-204ENST00000564664 LINC01561Q8N1V8 128 aa7.51□□□□□ -1.21
GTF3C1-204ENST00000564664 A0A087WZ39 114 aa7.5□□□□□ -1.21
GTF3C1-204ENST00000564664 K7EMI3 77 aa7.5□□□□□ -1.21
GTF3C1-204ENST00000564664 HIST1H2BKO60814 126 aa7.5□□□□□ -1.21
GTF3C1-204ENST00000564664 HIST1H2BJP06899 126 aa7.5□□□□□ -1.21
GTF3C1-204ENST00000564664 NPSP0C0P6 89 aa7.5□□□□□ -1.21
GTF3C1-204ENST00000564664 HIST1H2BOP23527 126 aa7.5□□□□□ -1.21
GTF3C1-204ENST00000564664 HIST1H2BBP33778 126 aa7.5□□□□□ -1.21
GTF3C1-204ENST00000564664 HIST1H2BDP58876 126 aa7.5□□□□□ -1.21
GTF3C1-204ENST00000564664 HIST1H2BCP62807 126 aa7.5□□□□□ -1.21
GTF3C1-204ENST00000564664 FABP9Q0Z7S8 132 aa7.5□□□□□ -1.21
GTF3C1-204ENST00000564664 HIST2H2BEQ16778 126 aa7.5□□□□□ -1.21
GTF3C1-204ENST00000564664 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.5□□□□□ -1.21
GTF3C1-204ENST00000564664 HIST1H2BHQ93079 126 aa7.5□□□□□ -1.21
GTF3C1-204ENST00000564664 TMEM141Q96I45 108 aa7.5□□□□□ -1.21
GTF3C1-204ENST00000564664 HIST1H2BNQ99877 126 aa7.5□□□□□ -1.21
GTF3C1-204ENST00000564664 HIST1H2BMQ99879 126 aa7.5□□□□□ -1.21
GTF3C1-204ENST00000564664 PSORS1C2Q9UIG4 136 aa7.5□□□□□ -1.21
GTF3C1-204ENST00000564664 IGLV4-3A0A075B6K6 122 aa7.48□□□□□ -1.21
GTF3C1-204ENST00000564664 TRBV30A0A0K0K1B3 111 aa7.48□□□□□ -1.21
GTF3C1-204ENST00000564664 TRGC2P03986 189 aa7.48□□□□□ -1.21
GTF3C1-204ENST00000564664 G0S2P27469 103 aa7.48□□□□□ -1.21
GTF3C1-204ENST00000564664 C1orf137Q5JT78 98 aa7.48□□□□□ -1.21
GTF3C1-204ENST00000564664 LINC00242Q5T6M2 205 aa7.48□□□□□ -1.21
GTF3C1-204ENST00000564664 UNQ6190/PRO20217Q6UXQ8 127 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms