RNA–Protein interactions for RNA: ENST00000564269.1

AC055855.3-201, humanhuman

TSL 2 BASIC

Gene AC055855.3, Length 578 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.3-201ENST00000564269 GNG4P50150 75 aa3.13□□□□□ -1.91
AC055855.3-201ENST00000564269 EIF5AP63241 154 aaKnown RBP3.13□□□□□ -1.91
AC055855.3-201ENST00000564269 RPL18AQ02543 176 aaKnown RBP3.13□□□□□ -1.91
AC055855.3-201ENST00000564269 EIF5AL1Q6IS14 154 aaKnown RBP3.13□□□□□ -1.91
AC055855.3-201ENST00000564269 MRPL52Q86TS9 123 aaKnown RBP3.13□□□□□ -1.91
AC055855.3-201ENST00000564269 C2orf48Q96LS8 159 aa3.13□□□□□ -1.91
AC055855.3-201ENST00000564269 CAMK2N2Q96S95 79 aa3.13□□□□□ -1.91
AC055855.3-201ENST00000564269 OPRPNQ99935 248 aaPredicted RBP3.13□□□□□ -1.91
AC055855.3-201ENST00000564269 A0A087WZ39 114 aa3.12□□□□□ -1.91
AC055855.3-201ENST00000564269 FAM168BA1KXE4 195 aa3.12□□□□□ -1.91
AC055855.3-201ENST00000564269 C1orf196B1AJZ1 125 aa3.12□□□□□ -1.91
AC055855.3-201ENST00000564269 COX7A2LO14548 114 aa3.12□□□□□ -1.91
AC055855.3-201ENST00000564269 BCL2L11O43521 198 aa3.12□□□□□ -1.91
AC055855.3-201ENST00000564269 TSHBP01222 138 aa3.12□□□□□ -1.91
AC055855.3-201ENST00000564269 TEX261Q6UWH6 196 aa3.12□□□□□ -1.91
AC055855.3-201ENST00000564269 SVIPQ8NHG7 77 aa3.12□□□□□ -1.91
AC055855.3-201ENST00000564269 MRAP2Q96G30 205 aa3.12□□□□□ -1.91
AC055855.3-201ENST00000564269 FAM210AQ96ND0 272 aa3.12□□□□□ -1.91
AC055855.3-201ENST00000564269 MANBALQ9NQG1 85 aa3.12□□□□□ -1.91
AC055855.3-201ENST00000564269 GNG13Q9P2W3 67 aa3.12□□□□□ -1.91
AC055855.3-201ENST00000564269 TRAV1-1A0A0B4J248 108 aa3.11□□□□□ -1.91
AC055855.3-201ENST00000564269 RPL13AP40429 203 aaKnown RBP3.11□□□□□ -1.91
AC055855.3-201ENST00000564269 UBE2D1P51668 147 aa3.11□□□□□ -1.91
AC055855.3-201ENST00000564269 POLR2KP53803 58 aaKnown RBP3.11□□□□□ -1.91
AC055855.3-201ENST00000564269 ZNF345Q14585 488 aa3.11□□□□□ -1.91
AC055855.3-201ENST00000564269 SMIM15Q7Z3B0 74 aa3.11□□□□□ -1.91
AC055855.3-201ENST00000564269 C5orf38Q86SI9 138 aa3.11□□□□□ -1.91
AC055855.3-201ENST00000564269 KRTAP7-1Q8IUC3 87 aa3.11□□□□□ -1.91
AC055855.3-201ENST00000564269 TSKUQ8WUA8 353 aa3.11□□□□□ -1.91
AC055855.3-201ENST00000564269 RNASE7Q9H1E1 156 aaKnown RBP3.11□□□□□ -1.91
AC055855.3-201ENST00000564269 RPP21Q9H633 154 aaKnown RBP3.11□□□□□ -1.91
AC055855.3-201ENST00000564269 BIN3Q9NQY0 253 aa3.11□□□□□ -1.91
AC055855.3-201ENST00000564269 TMEM242Q9NWH2 141 aa3.11□□□□□ -1.91
AC055855.3-201ENST00000564269 CARHSP1Q9Y2V2 147 aaKnown RBP3.11□□□□□ -1.91
AC055855.3-201ENST00000564269 TRBV27A0A0K0K1C4 114 aa3.1□□□□□ -1.91
AC055855.3-201ENST00000564269 C7orf77A4D0Y5 90 aa3.1□□□□□ -1.91
AC055855.3-201ENST00000564269 SMLR1H3BR10 107 aa3.1□□□□□ -1.91
AC055855.3-201ENST00000564269 K7EN84 100 aa3.1□□□□□ -1.91
AC055855.3-201ENST00000564269 PDE6DO43924 150 aa3.1□□□□□ -1.91
AC055855.3-201ENST00000564269 TLX1NBP0CAT3 122 aa3.1□□□□□ -1.91
AC055855.3-201ENST00000564269 CFC1BP0CG36 223 aa3.1□□□□□ -1.91
AC055855.3-201ENST00000564269 CFC1P0CG37 223 aa3.1□□□□□ -1.91
AC055855.3-201ENST00000564269 SPAG11BQ08648 103 aa3.1□□□□□ -1.91
AC055855.3-201ENST00000564269 RNASE13Q5GAN3 156 aaKnown RBP3.1□□□□□ -1.91
AC055855.3-201ENST00000564269 OR10D4PQ8NGN7 298 aa3.1□□□□□ -1.91
AC055855.3-201ENST00000564269 ST20Q9HBF5 79 aa3.1□□□□□ -1.91
AC055855.3-201ENST00000564269 MED9Q9NWA0 146 aa3.1□□□□□ -1.91
AC055855.3-201ENST00000564269 MRPL35Q9NZE8 188 aaKnown RBP3.1□□□□□ -1.91
AC055855.3-201ENST00000564269 UBE2D4Q9Y2X8 147 aa3.1□□□□□ -1.91
AC055855.3-201ENST00000564269 CSDC2Q9Y534 153 aaKnown RBP3.1□□□□□ -1.91
AC055855.3-201ENST00000564269 TRAV13-1A0A0B4J241 112 aa3.09□□□□□ -1.91
AC055855.3-201ENST00000564269 HMSDA8MTL9 139 aa3.09□□□□□ -1.91
AC055855.3-201ENST00000564269 TSPAN13O95857 204 aa3.09□□□□□ -1.91
AC055855.3-201ENST00000564269 FAM19A5Q7Z5A7 132 aaPredicted RBP3.09□□□□□ -1.91
AC055855.3-201ENST00000564269 OCC1Q8TAD7 63 aa3.09□□□□□ -1.91
AC055855.3-201ENST00000564269 IMMP2LQ96T52 175 aa3.09□□□□□ -1.91
AC055855.3-201ENST00000564269 IGHV3OR16-9A0A0B4J2B5 98 aa3.08□□□□□ -1.92
AC055855.3-201ENST00000564269 KANTRA0A1W2PQU2 76 aa3.08□□□□□ -1.92
AC055855.3-201ENST00000564269 F8WDY8 70 aa3.08□□□□□ -1.92
AC055855.3-201ENST00000564269 M0QXV9 152 aa3.08□□□□□ -1.92
AC055855.3-201ENST00000564269 VCYO14598 125 aa3.08□□□□□ -1.92
AC055855.3-201ENST00000564269 NDUFA1O15239 70 aa3.08□□□□□ -1.92
AC055855.3-201ENST00000564269 ZNF861PO60384 105 aa3.08□□□□□ -1.92
AC055855.3-201ENST00000564269 RAB4AP20338 218 aa3.08□□□□□ -1.92
AC055855.3-201ENST00000564269 TMEM241Q24JQ0 296 aa3.08□□□□□ -1.92
AC055855.3-201ENST00000564269 GAGE2EQ4V326 116 aa3.08□□□□□ -1.92
AC055855.3-201ENST00000564269 UNQ6190/PRO20217Q6UXQ8 127 aa3.08□□□□□ -1.92
AC055855.3-201ENST00000564269 Q6ZUT4 128 aa3.08□□□□□ -1.92
AC055855.3-201ENST00000564269 ORAOV1Q8WV07 137 aa3.08□□□□□ -1.92
AC055855.3-201ENST00000564269 FAM104AQ969W3 186 aa3.08□□□□□ -1.92
AC055855.3-201ENST00000564269 TMEM191AQ9H0A3 160 aa3.08□□□□□ -1.92
AC055855.3-201ENST00000564269 SMDT1Q9H4I9 107 aa3.08□□□□□ -1.92
AC055855.3-201ENST00000564269 C6orf48Q9UBA6 75 aa3.08□□□□□ -1.92
AC055855.3-201ENST00000564269 GAGE2DQ9UEU5 116 aa3.08□□□□□ -1.92
AC055855.3-201ENST00000564269 A0A087X002 238 aa3.07□□□□□ -1.92
AC055855.3-201ENST00000564269 SMKR1H3BMG3 65 aa3.07□□□□□ -1.92
AC055855.3-201ENST00000564269 TEX46H3BTG2 121 aa3.07□□□□□ -1.92
AC055855.3-201ENST00000564269 GATCO43716 136 aaKnown RBP3.07□□□□□ -1.92
AC055855.3-201ENST00000564269 FCER1GP30273 86 aa3.07□□□□□ -1.92
AC055855.3-201ENST00000564269 UBE2BP63146 152 aa3.07□□□□□ -1.92
AC055855.3-201ENST00000564269 SMAGPQ0VAQ4 97 aa3.07□□□□□ -1.92
AC055855.3-201ENST00000564269 KIAA0087Q14695 138 aa3.07□□□□□ -1.92
AC055855.3-201ENST00000564269 C9orf129Q5T035 196 aaKnown RBP3.07□□□□□ -1.92
AC055855.3-201ENST00000564269 FAM231DQ6ZW35 169 aa3.07□□□□□ -1.92
AC055855.3-201ENST00000564269 TIMM21Q9BVV7 248 aa3.07□□□□□ -1.92
AC055855.3-201ENST00000564269 PAM16Q9Y3D7 125 aa3.07□□□□□ -1.92
AC055855.3-201ENST00000564269 A8MWL6 223 aa3.06□□□□□ -1.92
AC055855.3-201ENST00000564269 AMN1Q8IY45 258 aa3.06□□□□□ -1.92
AC055855.3-201ENST00000564269 KIR2DL4Q99706 377 aa3.06□□□□□ -1.92
AC055855.3-201ENST00000564269 CTDSP1Q9GZU7 261 aa3.06□□□□□ -1.92
AC055855.3-201ENST00000564269 TRBV30A0A0K0K1B3 111 aa3.05□□□□□ -1.92
AC055855.3-201ENST00000564269 A0A1B0GUT8 65 aa3.05□□□□□ -1.92
AC055855.3-201ENST00000564269 HIGD1CA8MV81 97 aa3.05□□□□□ -1.92
AC055855.3-201ENST00000564269 NDUFC2-KCTD14E9PQ53 114 aa3.05□□□□□ -1.92
AC055855.3-201ENST00000564269 NUPR1O60356 82 aa3.05□□□□□ -1.92
AC055855.3-201ENST00000564269 RPL39P62891 51 aaKnown RBP3.05□□□□□ -1.92
AC055855.3-201ENST00000564269 TPRXLQ17RH7 258 aa3.05□□□□□ -1.92
AC055855.3-201ENST00000564269 TYMSOSQ8TAI1 123 aa3.05□□□□□ -1.92
AC055855.3-201ENST00000564269 BORCS7Q96B45 105 aa3.05□□□□□ -1.92
AC055855.3-201ENST00000564269 RETNLBQ9BQ08 111 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms