RNA–Protein interactions for RNA: ENST00000563995.1

SLX1A-204, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 3

Gene SLX1A, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-204ENST00000563995 PAPPA-AS1Q5QFB9 102 aa12.72□□□□□ -0.37
SLX1A-204ENST00000563995 Q5VSD8 79 aa12.72□□□□□ -0.37
SLX1A-204ENST00000563995 CFAP161Q6P656 301 aa12.72□□□□□ -0.37
SLX1A-204ENST00000563995 LINC00173Q6ZV60 143 aa12.72□□□□□ -0.37
SLX1A-204ENST00000563995 C15orf56Q8N910 161 aa12.72□□□□□ -0.37
SLX1A-204ENST00000563995 C2orf88Q9BSF0 95 aa12.72□□□□□ -0.37
SLX1A-204ENST00000563995 VCX2Q9H322 139 aa12.72□□□□□ -0.37
SLX1A-204ENST00000563995 FLG2Q5D862 2391 aaPredicted RBP12.72□□□□□ -0.37
SLX1A-204ENST00000563995 A0A096LNJ9 63 aa12.71□□□□□ -0.37
SLX1A-204ENST00000563995 VPS13BQ7Z7G8 4022 aa12.7□□□□□ -0.38
SLX1A-204ENST00000563995 ZC2HC1BQ5TFG8 222 aa12.7□□□□□ -0.38
SLX1A-204ENST00000563995 CHCHD1Q96BP2 118 aaKnown RBP12.7□□□□□ -0.38
SLX1A-204ENST00000563995 hDV102S1A0JD36 115 aa12.69□□□□□ -0.38
SLX1A-204ENST00000563995 HBDP02042 147 aa12.69□□□□□ -0.38
SLX1A-204ENST00000563995 GCSHP23434 173 aa12.69□□□□□ -0.38
SLX1A-204ENST00000563995 UBE2D1P51668 147 aa12.69□□□□□ -0.38
SLX1A-204ENST00000563995 PMCHL1Q16048 86 aa12.69□□□□□ -0.38
SLX1A-204ENST00000563995 J3QL48 77 aa12.68□□□□□ -0.38
SLX1A-204ENST00000563995 COX7A2LO14548 114 aa12.68□□□□□ -0.38
SLX1A-204ENST00000563995 BAGE3Q86Y29 109 aa12.68□□□□□ -0.38
SLX1A-204ENST00000563995 IGHV3OR16-9A0A0B4J2B5 98 aa12.67□□□□□ -0.38
SLX1A-204ENST00000563995 IGHV1-58A0A0C4DH39 117 aa12.67□□□□□ -0.38
SLX1A-204ENST00000563995 KRTAP10-1P60331 282 aa12.67□□□□□ -0.38
SLX1A-204ENST00000563995 LINC00242Q5T6M2 205 aa12.67□□□□□ -0.38
SLX1A-204ENST00000563995 GVQW2A0A096LPI5 108 aaPredicted RBP12.66□□□□□ -0.38
SLX1A-204ENST00000563995 HIGD2BQ4VC39 106 aa12.66□□□□□ -0.38
SLX1A-204ENST00000563995 PDZD11Q5EBL8 140 aa12.66□□□□□ -0.38
SLX1A-204ENST00000563995 C5orf38Q86SI9 138 aa12.66□□□□□ -0.38
SLX1A-204ENST00000563995 SRRM2Q9UQ35 2752 aaKnown RBP12.65□□□□□ -0.38
SLX1A-204ENST00000563995 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.65□□□□□ -0.38
SLX1A-204ENST00000563995 MALP21145 153 aa12.65□□□□□ -0.38
SLX1A-204ENST00000563995 FAM19A3Q7Z5A8 133 aa12.65□□□□□ -0.38
SLX1A-204ENST00000563995 CNBPP62633 177 aaKnown RBP12.64□□□□□ -0.39
SLX1A-204ENST00000563995 COX6A2Q02221 97 aa12.63□□□□□ -0.39
SLX1A-204ENST00000563995 HSBP1O75506 76 aa12.62□□□□□ -0.39
SLX1A-204ENST00000563995 SERF1AO75920 110 aa12.62□□□□□ -0.39
SLX1A-204ENST00000563995 APOMO95445 188 aa12.62□□□□□ -0.39
SLX1A-204ENST00000563995 SLPIP03973 132 aa12.62□□□□□ -0.39
SLX1A-204ENST00000563995 LINC00310P59036 64 aa12.62□□□□□ -0.39
SLX1A-204ENST00000563995 PMVKQ15126 192 aa12.62□□□□□ -0.39
SLX1A-204ENST00000563995 CST9LQ9H4G1 147 aa12.62□□□□□ -0.39
SLX1A-204ENST00000563995 ATP5LO75964 103 aa12.61□□□□□ -0.39
SLX1A-204ENST00000563995 SEC11AP67812 179 aa12.61□□□□□ -0.39
SLX1A-204ENST00000563995 LINC01620Q4KN68 170 aa12.61□□□□□ -0.39
SLX1A-204ENST00000563995 A0A087WZ39 114 aa12.6□□□□□ -0.39
SLX1A-204ENST00000563995 C9orf163Q8N9P6 203 aa12.6□□□□□ -0.39
SLX1A-204ENST00000563995 HMCN2Q8NDA2 5059 aa12.59□□□□□ -0.39
SLX1A-204ENST00000563995 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.59□□□□□ -0.39
SLX1A-204ENST00000563995 ZNF561-AS1K7EIQ3 104 aa12.59□□□□□ -0.39
SLX1A-204ENST00000563995 HIST1H2BKO60814 126 aa12.59□□□□□ -0.39
SLX1A-204ENST00000563995 SMR3BP02814 79 aaPredicted RBP12.59□□□□□ -0.39
SLX1A-204ENST00000563995 HIST1H2BJP06899 126 aa12.59□□□□□ -0.39
SLX1A-204ENST00000563995 HIST1H2BOP23527 126 aa12.59□□□□□ -0.39
SLX1A-204ENST00000563995 HIST1H2BBP33778 126 aa12.59□□□□□ -0.39
SLX1A-204ENST00000563995 HIST1H2BDP58876 126 aa12.59□□□□□ -0.39
SLX1A-204ENST00000563995 HIST1H2BCP62807 126 aa12.59□□□□□ -0.39
SLX1A-204ENST00000563995 HERVK_113P63121 156 aa12.59□□□□□ -0.39
SLX1A-204ENST00000563995 HIST2H2BEQ16778 126 aa12.59□□□□□ -0.39
SLX1A-204ENST00000563995 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.59□□□□□ -0.39
SLX1A-204ENST00000563995 FAM19A2Q8N3H0 131 aa12.59□□□□□ -0.39
SLX1A-204ENST00000563995 HIST1H2BHQ93079 126 aa12.59□□□□□ -0.39
SLX1A-204ENST00000563995 HIST1H2BNQ99877 126 aa12.59□□□□□ -0.39
SLX1A-204ENST00000563995 HIST1H2BMQ99879 126 aa12.59□□□□□ -0.39
SLX1A-204ENST00000563995 IGHV3-64A0A075B6Q5 118 aa12.58□□□□□ -0.4
SLX1A-204ENST00000563995 A0A0J9YXV3 536 aa12.58□□□□□ -0.4
SLX1A-204ENST00000563995 LINC01561Q8N1V8 128 aa12.58□□□□□ -0.4
SLX1A-204ENST00000563995 OR10D4PQ8NGN7 298 aa12.58□□□□□ -0.4
SLX1A-204ENST00000563995 LINC00526Q96FQ7 95 aa12.58□□□□□ -0.4
SLX1A-204ENST00000563995 GEMIN7Q9H840 131 aaKnown RBP12.58□□□□□ -0.4
SLX1A-204ENST00000563995 TINCRA0A1B0GVN0 87 aa12.57□□□□□ -0.4
SLX1A-204ENST00000563995 NUPR1O60356 82 aa12.57□□□□□ -0.4
SLX1A-204ENST00000563995 ORAOV1Q8WV07 137 aa12.57□□□□□ -0.4
SLX1A-204ENST00000563995 IGLV4-69A0A075B6H9 119 aa12.56□□□□□ -0.4
SLX1A-204ENST00000563995 NDUFA6P56556 154 aa12.56□□□□□ -0.4
SLX1A-204ENST00000563995 SPAG11BQ08648 103 aa12.56□□□□□ -0.4
SLX1A-204ENST00000563995 SERTAD4-AS1Q5TG53 156 aa12.56□□□□□ -0.4
SLX1A-204ENST00000563995 HAMPP81172 84 aa12.55□□□□□ -0.4
SLX1A-204ENST00000563995 IFI27L1Q96BM0 104 aa12.55□□□□□ -0.4
SLX1A-204ENST00000563995 FAM30AQ9NZY2 134 aa12.55□□□□□ -0.4
SLX1A-204ENST00000563995 CDKN2A-AS1Q9UH64 79 aa12.55□□□□□ -0.4
SLX1A-204ENST00000563995 IGLV5-45A0A087WSX0 123 aa12.54□□□□□ -0.4
SLX1A-204ENST00000563995 Q6ZSA8 131 aa12.54□□□□□ -0.4
SLX1A-204ENST00000563995 C2orf48Q96LS8 159 aa12.54□□□□□ -0.4
SLX1A-204ENST00000563995 IGLC3P0DOY3 106 aa12.53□□□□□ -0.4
SLX1A-204ENST00000563995 SYCNQ0VAF6 134 aa12.53□□□□□ -0.4
SLX1A-204ENST00000563995 LINC00469Q8N7U9 141 aa12.53□□□□□ -0.4
SLX1A-204ENST00000563995 CARD19Q96LW7 228 aa12.53□□□□□ -0.4
SLX1A-204ENST00000563995 DNAH8Q96JB1 4490 aa12.52□□□□□ -0.4
SLX1A-204ENST00000563995 FAM229AH3BQW9 127 aa12.52□□□□□ -0.41
SLX1A-204ENST00000563995 LEPROTL1O95214 131 aa12.52□□□□□ -0.41
SLX1A-204ENST00000563995 SDIM1Q6ZPB5 146 aa12.52□□□□□ -0.41
SLX1A-204ENST00000563995 CAMK2N2Q96S95 79 aa12.52□□□□□ -0.41
SLX1A-204ENST00000563995 TRAV12-1A0A0B4J245 112 aa12.51□□□□□ -0.41
SLX1A-204ENST00000563995 CHAC1Q9BUX1 264 aa12.51□□□□□ -0.41
SLX1A-204ENST00000563995 F8WDY8 70 aa12.5□□□□□ -0.41
SLX1A-204ENST00000563995 KIAA0087Q14695 138 aa12.5□□□□□ -0.41
SLX1A-204ENST00000563995 Q6ZRU5 148 aa12.5□□□□□ -0.41
SLX1A-204ENST00000563995 PACRGQ96M98 296 aaPredicted RBP12.5□□□□□ -0.41
SLX1A-204ENST00000563995 HSPB8Q9UJY1 196 aa12.49□□□□□ -0.41
SLX1A-204ENST00000563995 CHTOPQ9Y3Y2 248 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms