RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 MAP1LC3AQ9H492 121 aa3.52□□□□□ -1.85
HERPUD1-207ENST00000563781 IGHV1-24A0A0C4DH33 117 aa3.51□□□□□ -1.85
HERPUD1-207ENST00000563781 LOC389332A0A1B0GUA5 103 aa3.51□□□□□ -1.85
HERPUD1-207ENST00000563781 I3L3M4 83 aa3.51□□□□□ -1.85
HERPUD1-207ENST00000563781 ATP5LO75964 103 aa3.51□□□□□ -1.85
HERPUD1-207ENST00000563781 LY6G6CO95867 125 aa3.51□□□□□ -1.85
HERPUD1-207ENST00000563781 HNRNPA3P51991 378 aaKnown RBP3.51□□□□□ -1.85
HERPUD1-207ENST00000563781 XGP55808 180 aa3.51□□□□□ -1.85
HERPUD1-207ENST00000563781 NIT1Q86X76 327 aa3.51□□□□□ -1.85
HERPUD1-207ENST00000563781 UBE2DNLQ8IWF7 75 aa3.51□□□□□ -1.85
HERPUD1-207ENST00000563781 Q8N8P6 123 aa3.51□□□□□ -1.85
HERPUD1-207ENST00000563781 C18orf32Q8TCD1 76 aa3.51□□□□□ -1.85
HERPUD1-207ENST00000563781 TMEM243Q9BU79 118 aa3.51□□□□□ -1.85
HERPUD1-207ENST00000563781 KRTAP1-5Q9BYS1 174 aa3.51□□□□□ -1.85
HERPUD1-207ENST00000563781 HECTD4Q9Y4D8 3996 aa3.51□□□□□ -1.85
HERPUD1-207ENST00000563781 HERC2O95714 4834 aa3.5□□□□□ -1.85
HERPUD1-207ENST00000563781 TRBV25-1A0A075B6N4 114 aa3.5□□□□□ -1.85
HERPUD1-207ENST00000563781 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.5□□□□□ -1.85
HERPUD1-207ENST00000563781 TRAV8-6A0A0B4J262 113 aa3.5□□□□□ -1.85
HERPUD1-207ENST00000563781 IGKV2-29A2NJV5 120 aaPredicted RBP3.5□□□□□ -1.85
HERPUD1-207ENST00000563781 LINC01546A6NGU7 62 aa3.5□□□□□ -1.85
HERPUD1-207ENST00000563781 DNAH10OSP0CZ25 163 aa3.5□□□□□ -1.85
HERPUD1-207ENST00000563781 IFI27P40305 119 aaPredicted RBP3.5□□□□□ -1.85
HERPUD1-207ENST00000563781 MPV17L2Q567V2 206 aa3.5□□□□□ -1.85
HERPUD1-207ENST00000563781 LINC01556Q5JQF7 62 aa3.5□□□□□ -1.85
HERPUD1-207ENST00000563781 LINC00336Q6ZUF6 198 aa3.5□□□□□ -1.85
HERPUD1-207ENST00000563781 C20orf203Q8NBC4 194 aa3.5□□□□□ -1.85
HERPUD1-207ENST00000563781 C12orf57Q99622 126 aa3.5□□□□□ -1.85
HERPUD1-207ENST00000563781 KIR2DL4Q99706 377 aa3.5□□□□□ -1.85
HERPUD1-207ENST00000563781 NXT2Q9NPJ8 142 aaKnown RBP3.5□□□□□ -1.85
HERPUD1-207ENST00000563781 PKD1P98161 4303 aa3.5□□□□□ -1.85
HERPUD1-207ENST00000563781 IGLV4-60A0A075B6I1 120 aa3.49□□□□□ -1.85
HERPUD1-207ENST00000563781 NBDYA0A0U1RRE5 68 aa3.49□□□□□ -1.85
HERPUD1-207ENST00000563781 IGHV3-30P01768 117 aa3.49□□□□□ -1.85
HERPUD1-207ENST00000563781 IGHV3-33P01772 117 aa3.49□□□□□ -1.85
HERPUD1-207ENST00000563781 IGHV3-30-3P0DP02 117 aa3.49□□□□□ -1.85
HERPUD1-207ENST00000563781 IGHV3-30-5P0DP03 117 aa3.49□□□□□ -1.85
HERPUD1-207ENST00000563781 FCER1GP30273 86 aa3.49□□□□□ -1.85
HERPUD1-207ENST00000563781 RPL39P62891 51 aaKnown RBP3.49□□□□□ -1.85
HERPUD1-207ENST00000563781 Q6ZR54 194 aa3.49□□□□□ -1.85
HERPUD1-207ENST00000563781 MRPL52Q86TS9 123 aaKnown RBP3.49□□□□□ -1.85
HERPUD1-207ENST00000563781 Q8N976 141 aa3.49□□□□□ -1.85
HERPUD1-207ENST00000563781 FAM104AQ969W3 186 aa3.49□□□□□ -1.85
HERPUD1-207ENST00000563781 CHCHD5Q9BSY4 110 aa3.49□□□□□ -1.85
HERPUD1-207ENST00000563781 PPDPFQ9H3Y8 114 aa3.49□□□□□ -1.85
HERPUD1-207ENST00000563781 LRP1BQ9NZR2 4599 aa3.49□□□□□ -1.85
HERPUD1-207ENST00000563781 DNAH8Q96JB1 4490 aa3.48□□□□□ -1.85
HERPUD1-207ENST00000563781 A0A096LNJ9 63 aa3.48□□□□□ -1.85
HERPUD1-207ENST00000563781 TMEM262E9PQX1 116 aa3.48□□□□□ -1.85
HERPUD1-207ENST00000563781 TSTD3H0UI37 97 aa3.48□□□□□ -1.85
HERPUD1-207ENST00000563781 H7C423 109 aa3.48□□□□□ -1.85
HERPUD1-207ENST00000563781 K7EMI3 77 aa3.48□□□□□ -1.85
HERPUD1-207ENST00000563781 M0R2N4 97 aa3.48□□□□□ -1.85
HERPUD1-207ENST00000563781 HIST1H2BKO60814 126 aa3.48□□□□□ -1.85
HERPUD1-207ENST00000563781 HIST1H2BJP06899 126 aa3.48□□□□□ -1.85
HERPUD1-207ENST00000563781 FGF6P10767 208 aa3.48□□□□□ -1.85
HERPUD1-207ENST00000563781 HIST1H2BOP23527 126 aa3.48□□□□□ -1.85
HERPUD1-207ENST00000563781 HIST1H2BBP33778 126 aa3.48□□□□□ -1.85
HERPUD1-207ENST00000563781 HIST1H2BDP58876 126 aa3.48□□□□□ -1.85
HERPUD1-207ENST00000563781 PKIAP61925 76 aa3.48□□□□□ -1.85
HERPUD1-207ENST00000563781 HIST1H2BCP62807 126 aa3.48□□□□□ -1.85
HERPUD1-207ENST00000563781 Q0VG73 95 aa3.48□□□□□ -1.85
HERPUD1-207ENST00000563781 TAL2Q16559 108 aa3.48□□□□□ -1.85
HERPUD1-207ENST00000563781 HIST2H2BEQ16778 126 aa3.48□□□□□ -1.85
HERPUD1-207ENST00000563781 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.48□□□□□ -1.85
HERPUD1-207ENST00000563781 FA2HQ7L5A8 372 aa3.48□□□□□ -1.85
HERPUD1-207ENST00000563781 HIST1H2BHQ93079 126 aa3.48□□□□□ -1.85
HERPUD1-207ENST00000563781 HIST1H2BNQ99877 126 aa3.48□□□□□ -1.85
HERPUD1-207ENST00000563781 HIST1H2BMQ99879 126 aa3.48□□□□□ -1.85
HERPUD1-207ENST00000563781 UBE2D4Q9Y2X8 147 aa3.48□□□□□ -1.85
HERPUD1-207ENST00000563781 PKHD1P08F94 4074 aa3.48□□□□□ -1.85
HERPUD1-207ENST00000563781 A0A087WX48 190 aa3.47□□□□□ -1.85
HERPUD1-207ENST00000563781 A0A1B0GUV1 79 aa3.47□□□□□ -1.85
HERPUD1-207ENST00000563781 IBA57-AS1B1ANH7 110 aa3.47□□□□□ -1.85
HERPUD1-207ENST00000563781 NUPR1O60356 82 aa3.47□□□□□ -1.85
HERPUD1-207ENST00000563781 SERF1AO75920 110 aa3.47□□□□□ -1.85
HERPUD1-207ENST00000563781 ZNF25P17030 456 aaPredicted RBP3.47□□□□□ -1.85
HERPUD1-207ENST00000563781 ORMDL2Q53FV1 153 aa3.47□□□□□ -1.85
HERPUD1-207ENST00000563781 TTC32Q5I0X7 151 aa3.47□□□□□ -1.85
HERPUD1-207ENST00000563781 ENHOQ6UWT2 76 aa3.47□□□□□ -1.85
HERPUD1-207ENST00000563781 C2orf66Q6UXQ4 117 aa3.47□□□□□ -1.85
HERPUD1-207ENST00000563781 Q6ZRN7 208 aaPredicted RBP3.47□□□□□ -1.85
HERPUD1-207ENST00000563781 Q6ZUT4 128 aa3.47□□□□□ -1.85
HERPUD1-207ENST00000563781 MTURNQ8N3F0 131 aa3.47□□□□□ -1.85
HERPUD1-207ENST00000563781 TIMM21Q9BVV7 248 aa3.47□□□□□ -1.85
HERPUD1-207ENST00000563781 PRR34Q9NV39 138 aa3.47□□□□□ -1.85
HERPUD1-207ENST00000563781 KLK12Q9UKR0 248 aa3.47□□□□□ -1.85
HERPUD1-207ENST00000563781 IGLV4-3A0A075B6K6 122 aa3.46□□□□□ -1.86
HERPUD1-207ENST00000563781 IGIPA6NJ69 53 aa3.46□□□□□ -1.86
HERPUD1-207ENST00000563781 C1orf196B1AJZ1 125 aa3.46□□□□□ -1.86
HERPUD1-207ENST00000563781 K7EP13 123 aa3.46□□□□□ -1.86
HERPUD1-207ENST00000563781 UBE2L6O14933 153 aa3.46□□□□□ -1.86
HERPUD1-207ENST00000563781 ANGP03950 147 aaKnown RBP3.46□□□□□ -1.86
HERPUD1-207ENST00000563781 PRSS1P07477 247 aa3.46□□□□□ -1.86
HERPUD1-207ENST00000563781 SCGB1A1P11684 91 aa3.46□□□□□ -1.86
HERPUD1-207ENST00000563781 RAB5BP61020 215 aa3.46□□□□□ -1.86
HERPUD1-207ENST00000563781 MRPS36P82909 103 aaKnown RBP3.46□□□□□ -1.86
HERPUD1-207ENST00000563781 PMCHL1Q16048 86 aa3.46□□□□□ -1.86
HERPUD1-207ENST00000563781 COA6Q5JTJ3 125 aaKnown RBP3.46□□□□□ -1.86
HERPUD1-207ENST00000563781 LCE1AQ5T7P2 110 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms