RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 CTDSP2O14595 271 aa1.86□□□□□ -2.11
HERC1-211ENST00000560983 SNAI2O43623 268 aa1.86□□□□□ -2.11
HERC1-211ENST00000560983 SLC25A20O43772 301 aa1.86□□□□□ -2.11
HERC1-211ENST00000560983 DEFA3P59666 94 aa1.86□□□□□ -2.11
HERC1-211ENST00000560983 SSTP61278 116 aa1.86□□□□□ -2.11
HERC1-211ENST00000560983 RPS29P62273 56 aaKnown RBP1.86□□□□□ -2.11
HERC1-211ENST00000560983 MRPS10P82664 201 aaKnown RBP1.86□□□□□ -2.11
HERC1-211ENST00000560983 ATP6V1FQ16864 119 aa1.86□□□□□ -2.11
HERC1-211ENST00000560983 KHDC3LQ587J8 217 aa1.86□□□□□ -2.11
HERC1-211ENST00000560983 RASL11AQ6T310 242 aa1.86□□□□□ -2.11
HERC1-211ENST00000560983 Q86TA4 180 aa1.86□□□□□ -2.11
HERC1-211ENST00000560983 NIT2Q9NQR4 276 aa1.86□□□□□ -2.11
HERC1-211ENST00000560983 CYTL1Q9NRR1 136 aa1.86□□□□□ -2.11
HERC1-211ENST00000560983 C1orf196B1AJZ1 125 aa1.85□□□□□ -2.11
HERC1-211ENST00000560983 L7N2F9 121 aa1.85□□□□□ -2.11
HERC1-211ENST00000560983 NDUFA1O15239 70 aa1.85□□□□□ -2.11
HERC1-211ENST00000560983 UPK1BO75841 260 aa1.85□□□□□ -2.11
HERC1-211ENST00000560983 OR5AL1P0C617 328 aa1.85□□□□□ -2.11
HERC1-211ENST00000560983 ZNF25P17030 456 aaPredicted RBP1.85□□□□□ -2.11
HERC1-211ENST00000560983 UBE2AP49459 152 aa1.85□□□□□ -2.11
HERC1-211ENST00000560983 NDUFV3P56181 108 aaKnown RBP1.85□□□□□ -2.11
HERC1-211ENST00000560983 TAS2R45P59539 299 aa1.85□□□□□ -2.11
HERC1-211ENST00000560983 RPL37P61927 97 aaKnown RBP1.85□□□□□ -2.11
HERC1-211ENST00000560983 NCS1P62166 190 aa1.85□□□□□ -2.11
HERC1-211ENST00000560983 IL18Q14116 193 aa1.85□□□□□ -2.11
HERC1-211ENST00000560983 KIAA0087Q14695 138 aa1.85□□□□□ -2.11
HERC1-211ENST00000560983 MRPL55Q7Z7F7 128 aaKnown RBP1.85□□□□□ -2.11
HERC1-211ENST00000560983 FAM19A2Q8N3H0 131 aa1.85□□□□□ -2.11
HERC1-211ENST00000560983 OR10D4PQ8NGN7 298 aa1.85□□□□□ -2.11
HERC1-211ENST00000560983 CNBD2Q96M20 576 aa1.85□□□□□ -2.11
HERC1-211ENST00000560983 PACRGQ96M98 296 aaPredicted RBP1.85□□□□□ -2.11
HERC1-211ENST00000560983 MARVELD1Q9BSK0 173 aa1.85□□□□□ -2.11
HERC1-211ENST00000560983 WDR61Q9GZS3 305 aaKnown RBP1.85□□□□□ -2.11
HERC1-211ENST00000560983 VCXQ9H320 206 aa1.85□□□□□ -2.11
HERC1-211ENST00000560983 TP73-AS1Q9UF72 201 aa1.85□□□□□ -2.11
HERC1-211ENST00000560983 HMGB3O15347 200 aaKnown RBP1.84□□□□□ -2.11
HERC1-211ENST00000560983 NCR2O95944 276 aa1.84□□□□□ -2.11
HERC1-211ENST00000560983 MGPP08493 103 aa1.84□□□□□ -2.11
HERC1-211ENST00000560983 SMIM17P0DL12 118 aa1.84□□□□□ -2.11
HERC1-211ENST00000560983 UBE2G2P60604 165 aa1.84□□□□□ -2.11
HERC1-211ENST00000560983 HBG1P69891 147 aa1.84□□□□□ -2.11
HERC1-211ENST00000560983 HBG2P69892 147 aa1.84□□□□□ -2.11
HERC1-211ENST00000560983 PRLHP81277 87 aa1.84□□□□□ -2.11
HERC1-211ENST00000560983 NEDD8Q15843 81 aa1.84□□□□□ -2.11
HERC1-211ENST00000560983 SPANXN1Q5VSR9 72 aa1.84□□□□□ -2.11
HERC1-211ENST00000560983 MCFD2Q8NI22 146 aa1.84□□□□□ -2.11
HERC1-211ENST00000560983 ORAOV1Q8WV07 137 aa1.84□□□□□ -2.11
HERC1-211ENST00000560983 TMEM101Q96IK0 257 aa1.84□□□□□ -2.11
HERC1-211ENST00000560983 SPRR4Q96PI1 79 aa1.84□□□□□ -2.11
HERC1-211ENST00000560983 LSM5Q9Y4Y9 91 aaKnown RBP1.84□□□□□ -2.11
HERC1-211ENST00000560983 ALG5Q9Y673 324 aa1.84□□□□□ -2.11
HERC1-211ENST00000560983 IGHV3OR16-9A0A0B4J2B5 98 aa1.83□□□□□ -2.12
HERC1-211ENST00000560983 ZNF727A8MUV8 499 aa1.83□□□□□ -2.12
HERC1-211ENST00000560983 CXCL1P09341 107 aa1.83□□□□□ -2.12
HERC1-211ENST00000560983 SPRR2EP22531 72 aa1.83□□□□□ -2.12
HERC1-211ENST00000560983 SPRR2BP35325 72 aa1.83□□□□□ -2.12
HERC1-211ENST00000560983 SPRR2AP35326 72 aa1.83□□□□□ -2.12
HERC1-211ENST00000560983 FOXA3P55318 350 aaPredicted RBP1.83□□□□□ -2.12
HERC1-211ENST00000560983 RPS20P60866 119 aaKnown RBP1.83□□□□□ -2.12
HERC1-211ENST00000560983 VBP1P61758 197 aa1.83□□□□□ -2.12
HERC1-211ENST00000560983 IL15RAQ13261 267 aa1.83□□□□□ -2.12
HERC1-211ENST00000560983 LRRC37A5PQ49AS3 106 aa1.83□□□□□ -2.12
HERC1-211ENST00000560983 C2orf82Q6UX34 121 aa1.83□□□□□ -2.12
HERC1-211ENST00000560983 TMUB2Q71RG4 321 aa1.83□□□□□ -2.12
HERC1-211ENST00000560983 MRPL52Q86TS9 123 aaKnown RBP1.83□□□□□ -2.12
HERC1-211ENST00000560983 STX12Q86Y82 276 aa1.83□□□□□ -2.12
HERC1-211ENST00000560983 LINC00469Q8N7U9 141 aa1.83□□□□□ -2.12
HERC1-211ENST00000560983 BTF3L4Q96K17 158 aa1.83□□□□□ -2.12
HERC1-211ENST00000560983 AP1S3Q96PC3 154 aa1.83□□□□□ -2.12
HERC1-211ENST00000560983 XAGE1AQ9HD64 81 aa1.83□□□□□ -2.12
HERC1-211ENST00000560983 ZFP30Q9Y2G7 519 aa1.83□□□□□ -2.12
HERC1-211ENST00000560983 AHNAK2Q8IVF2 5795 aa1.83□□□□□ -2.12
HERC1-211ENST00000560983 TRAV13-1A0A0B4J241 112 aa1.82□□□□□ -2.12
HERC1-211ENST00000560983 TRBV30A0A0K0K1B3 111 aa1.82□□□□□ -2.12
HERC1-211ENST00000560983 C20orf202A1L168 122 aa1.82□□□□□ -2.12
HERC1-211ENST00000560983 APCSP02743 223 aa1.82□□□□□ -2.12
HERC1-211ENST00000560983 STAG3L2P0CL84 134 aa1.82□□□□□ -2.12
HERC1-211ENST00000560983 STAG3L3P0CL85 134 aa1.82□□□□□ -2.12
HERC1-211ENST00000560983 ARL14EPLP0DKL9 152 aa1.82□□□□□ -2.12
HERC1-211ENST00000560983 RPL32P62910 135 aaKnown RBP1.82□□□□□ -2.12
HERC1-211ENST00000560983 RNASE13Q5GAN3 156 aaKnown RBP1.82□□□□□ -2.12
HERC1-211ENST00000560983 LYZL1Q6UWQ5 148 aa1.82□□□□□ -2.12
HERC1-211ENST00000560983 GATD1Q8NB37 220 aa1.82□□□□□ -2.12
HERC1-211ENST00000560983 MRPS26Q9BYN8 205 aaKnown RBP1.82□□□□□ -2.12
HERC1-211ENST00000560983 KCNIP2Q9NS61 270 aa1.82□□□□□ -2.12
HERC1-211ENST00000560983 A0A1W2PPV4 95 aa1.81□□□□□ -2.12
HERC1-211ENST00000560983 C17orf112F2Z3M2 114 aa1.81□□□□□ -2.12
HERC1-211ENST00000560983 LTAP01374 205 aa1.81□□□□□ -2.12
HERC1-211ENST00000560983 IGLV6-57P01721 117 aa1.81□□□□□ -2.12
HERC1-211ENST00000560983 GCHFRP30047 84 aa1.81□□□□□ -2.12
HERC1-211ENST00000560983 MZT2BQ6NZ67 158 aa1.81□□□□□ -2.12
HERC1-211ENST00000560983 CBLN2Q8IUK8 224 aa1.81□□□□□ -2.12
HERC1-211ENST00000560983 FAM104AQ969W3 186 aa1.81□□□□□ -2.12
HERC1-211ENST00000560983 RPL39LQ96EH5 51 aaKnown RBP1.81□□□□□ -2.12
HERC1-211ENST00000560983 GNB1LQ9BYB4 327 aa1.81□□□□□ -2.12
HERC1-211ENST00000560983 CHTOPQ9Y3Y2 248 aaKnown RBP1.81□□□□□ -2.12
HERC1-211ENST00000560983 A0A1W2PRE2 83 aa1.8□□□□□ -2.12
HERC1-211ENST00000560983 SDHAF1A6NFY7 115 aa1.8□□□□□ -2.12
HERC1-211ENST00000560983 A6NN06 94 aa1.8□□□□□ -2.12
HERC1-211ENST00000560983 TMEM238C9JI98 176 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 220.5 ms