RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 TIMM17AQ99595 171 aa7.99□□□□□ -1.13
SMAD3-205ENST00000558428 FAT1Q14517 4588 aa7.98□□□□□ -1.13
SMAD3-205ENST00000558428 LINC01549A6NIU2 74 aa7.98□□□□□ -1.13
SMAD3-205ENST00000558428 ZNF561-AS1K7EIQ3 104 aa7.98□□□□□ -1.13
SMAD3-205ENST00000558428 APOMO95445 188 aa7.98□□□□□ -1.13
SMAD3-205ENST00000558428 UBE2D1P51668 147 aa7.98□□□□□ -1.13
SMAD3-205ENST00000558428 PAPPA-AS1Q5QFB9 102 aa7.98□□□□□ -1.13
SMAD3-205ENST00000558428 LINC00173Q6ZV60 143 aa7.98□□□□□ -1.13
SMAD3-205ENST00000558428 ERASQ7Z444 233 aa7.98□□□□□ -1.13
SMAD3-205ENST00000558428 LINC00526Q96FQ7 95 aa7.98□□□□□ -1.13
SMAD3-205ENST00000558428 IGHV3-64A0A075B6Q5 118 aa7.97□□□□□ -1.13
SMAD3-205ENST00000558428 IGHV3OR16-9A0A0B4J2B5 98 aa7.97□□□□□ -1.13
SMAD3-205ENST00000558428 LINC00614P0C842 121 aa7.97□□□□□ -1.13
SMAD3-205ENST00000558428 LINC00242Q5T6M2 205 aa7.97□□□□□ -1.13
SMAD3-205ENST00000558428 URB1-AS1Q96HZ7 61 aa7.97□□□□□ -1.13
SMAD3-205ENST00000558428 ABCA13Q86UQ4 5058 aa7.97□□□□□ -1.13
SMAD3-205ENST00000558428 RAB5BP61020 215 aa7.96□□□□□ -1.14
SMAD3-205ENST00000558428 Q8N1X5 172 aa7.96□□□□□ -1.14
SMAD3-205ENST00000558428 IGLV4-69A0A075B6H9 119 aa7.95□□□□□ -1.14
SMAD3-205ENST00000558428 TRGC2P03986 189 aa7.95□□□□□ -1.14
SMAD3-205ENST00000558428 COX6A2Q02221 97 aa7.95□□□□□ -1.14
SMAD3-205ENST00000558428 SDIM1Q6ZPB5 146 aa7.95□□□□□ -1.14
SMAD3-205ENST00000558428 ORAOV1Q8WV07 137 aa7.95□□□□□ -1.14
SMAD3-205ENST00000558428 KRTAP17-1Q9BYP8 105 aa7.95□□□□□ -1.14
SMAD3-205ENST00000558428 A0A087WZ39 114 aa7.94□□□□□ -1.14
SMAD3-205ENST00000558428 HBDP02042 147 aa7.94□□□□□ -1.14
SMAD3-205ENST00000558428 SMR3BP02814 79 aaPredicted RBP7.94□□□□□ -1.14
SMAD3-205ENST00000558428 SPAG11BQ08648 103 aa7.94□□□□□ -1.14
SMAD3-205ENST00000558428 PMCHL1Q16048 86 aa7.94□□□□□ -1.14
SMAD3-205ENST00000558428 SCXQ7RTU7 201 aa7.94□□□□□ -1.14
SMAD3-205ENST00000558428 OR10D4PQ8NGN7 298 aa7.94□□□□□ -1.14
SMAD3-205ENST00000558428 CARD19Q96LW7 228 aa7.94□□□□□ -1.14
SMAD3-205ENST00000558428 CHAC1Q9BUX1 264 aa7.94□□□□□ -1.14
SMAD3-205ENST00000558428 VPS13BQ7Z7G8 4022 aa7.93□□□□□ -1.14
SMAD3-205ENST00000558428 A0A096LNJ9 63 aa7.93□□□□□ -1.14
SMAD3-205ENST00000558428 COLCA2A8K830 154 aa7.93□□□□□ -1.14
SMAD3-205ENST00000558428 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.93□□□□□ -1.14
SMAD3-205ENST00000558428 SCO1O75880 301 aa7.93□□□□□ -1.14
SMAD3-205ENST00000558428 SEC11AP67812 179 aa7.93□□□□□ -1.14
SMAD3-205ENST00000558428 SYCNQ0VAF6 134 aa7.93□□□□□ -1.14
SMAD3-205ENST00000558428 FAM19A3Q7Z5A8 133 aa7.93□□□□□ -1.14
SMAD3-205ENST00000558428 CAMK2N2Q96S95 79 aa7.93□□□□□ -1.14
SMAD3-205ENST00000558428 HERVK_113P63121 156 aa7.92□□□□□ -1.14
SMAD3-205ENST00000558428 Q6ZRU5 148 aa7.92□□□□□ -1.14
SMAD3-205ENST00000558428 CIRBP-AS1Q8TBR5 109 aa7.92□□□□□ -1.14
SMAD3-205ENST00000558428 C2orf48Q96LS8 159 aa7.92□□□□□ -1.14
SMAD3-205ENST00000558428 KRTAP4-5Q9BYR2 181 aa7.92□□□□□ -1.14
SMAD3-205ENST00000558428 GEMIN7Q9H840 131 aaKnown RBP7.92□□□□□ -1.14
SMAD3-205ENST00000558428 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.92□□□□□ -1.14
SMAD3-205ENST00000558428 PCLOQ9Y6V0 5065 aa7.92□□□□□ -1.14
SMAD3-205ENST00000558428 A0A0J9YXV3 536 aa7.91□□□□□ -1.14
SMAD3-205ENST00000558428 PANO1I0J062 215 aa7.91□□□□□ -1.14
SMAD3-205ENST00000558428 PMVKQ15126 192 aa7.91□□□□□ -1.14
SMAD3-205ENST00000558428 BAGE3Q86Y29 109 aa7.91□□□□□ -1.14
SMAD3-205ENST00000558428 CHCHD1Q96BP2 118 aaKnown RBP7.91□□□□□ -1.14
SMAD3-205ENST00000558428 CST9LQ9H4G1 147 aa7.91□□□□□ -1.14
SMAD3-205ENST00000558428 EPM2AB3EWF7 344 aa7.9□□□□□ -1.14
SMAD3-205ENST00000558428 CHTF8P0CG12 524 aa7.9□□□□□ -1.14
SMAD3-205ENST00000558428 NDUFA6P56556 154 aa7.9□□□□□ -1.14
SMAD3-205ENST00000558428 PDZD11Q5EBL8 140 aa7.9□□□□□ -1.14
SMAD3-205ENST00000558428 Q5VSD8 79 aa7.9□□□□□ -1.14
SMAD3-205ENST00000558428 LINC01561Q8N1V8 128 aa7.9□□□□□ -1.14
SMAD3-205ENST00000558428 DPH3Q96FX2 82 aa7.9□□□□□ -1.14
SMAD3-205ENST00000558428 PKIGQ9Y2B9 76 aa7.9□□□□□ -1.14
SMAD3-205ENST00000558428 IGKV2-24A0A0C4DH68 120 aa7.89□□□□□ -1.15
SMAD3-205ENST00000558428 TINCRA0A1B0GVN0 87 aa7.89□□□□□ -1.15
SMAD3-205ENST00000558428 FAM229AH3BQW9 127 aa7.89□□□□□ -1.15
SMAD3-205ENST00000558428 NDUFA1O15239 70 aa7.89□□□□□ -1.15
SMAD3-205ENST00000558428 ATP5LO75964 103 aa7.89□□□□□ -1.15
SMAD3-205ENST00000558428 CIRBPQ14011 172 aaKnown RBP7.89□□□□□ -1.15
SMAD3-205ENST00000558428 LINC00469Q8N7U9 141 aa7.89□□□□□ -1.15
SMAD3-205ENST00000558428 CDKN2A-AS1Q9UH64 79 aa7.89□□□□□ -1.15
SMAD3-205ENST00000558428 F8WDY8 70 aa7.88□□□□□ -1.15
SMAD3-205ENST00000558428 HSBP1O75506 76 aa7.88□□□□□ -1.15
SMAD3-205ENST00000558428 LINC00528Q8N1L1 170 aa7.88□□□□□ -1.15
SMAD3-205ENST00000558428 SPACA4Q8TDM5 124 aa7.88□□□□□ -1.15
SMAD3-205ENST00000558428 PACRGQ96M98 296 aaPredicted RBP7.88□□□□□ -1.15
SMAD3-205ENST00000558428 A0A096LNI7 61 aa7.87□□□□□ -1.15
SMAD3-205ENST00000558428 LOC107984640A0A0U1RRK4 108 aa7.87□□□□□ -1.15
SMAD3-205ENST00000558428 PRSS2P07478 247 aa7.87□□□□□ -1.15
SMAD3-205ENST00000558428 KIAA0087Q14695 138 aa7.87□□□□□ -1.15
SMAD3-205ENST00000558428 MAJINQ3KP22 176 aa7.87□□□□□ -1.15
SMAD3-205ENST00000558428 MRPL35Q9NZE8 188 aaKnown RBP7.87□□□□□ -1.15
SMAD3-205ENST00000558428 TOMM7Q9P0U1 55 aa7.87□□□□□ -1.15
SMAD3-205ENST00000558428 A0A087WYN8 130 aa7.86□□□□□ -1.15
SMAD3-205ENST00000558428 C10orf25Q5T742 122 aa7.86□□□□□ -1.15
SMAD3-205ENST00000558428 UNQ6190/PRO20217Q6UXQ8 127 aa7.86□□□□□ -1.15
SMAD3-205ENST00000558428 FAM19A2Q8N3H0 131 aa7.86□□□□□ -1.15
SMAD3-205ENST00000558428 IGLV5-45A0A087WSX0 123 aa7.85□□□□□ -1.15
SMAD3-205ENST00000558428 SERF1AO75920 110 aa7.85□□□□□ -1.15
SMAD3-205ENST00000558428 RPL18AQ02543 176 aaKnown RBP7.85□□□□□ -1.15
SMAD3-205ENST00000558428 GAGE2BQ13066 116 aa7.85□□□□□ -1.15
SMAD3-205ENST00000558428 RNF151Q2KHN1 245 aa7.85□□□□□ -1.15
SMAD3-205ENST00000558428 C2orf82Q6UX34 121 aa7.85□□□□□ -1.15
SMAD3-205ENST00000558428 Q8IZM0 81 aa7.85□□□□□ -1.15
SMAD3-205ENST00000558428 LINC00474Q9P2X8 69 aa7.85□□□□□ -1.15
SMAD3-205ENST00000558428 C6orf48Q9UBA6 75 aa7.85□□□□□ -1.15
SMAD3-205ENST00000558428 SMIM1B2RUZ4 78 aa7.84□□□□□ -1.15
SMAD3-205ENST00000558428 IGLC3P0DOY3 106 aa7.84□□□□□ -1.15
SMAD3-205ENST00000558428 PTTG1IPP53801 180 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms