RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 S100ZQ8WXG8 99 aa3.34□□□□□ -1.87
HNRNPC-233ENST00000557768 HIST1H2BAQ96A08 127 aa3.34□□□□□ -1.87
HNRNPC-233ENST00000557768 FMC1Q96HJ9 113 aa3.34□□□□□ -1.87
HNRNPC-233ENST00000557768 TIMM17AQ99595 171 aa3.34□□□□□ -1.87
HNRNPC-233ENST00000557768 PLAC8Q9NZF1 115 aa3.34□□□□□ -1.87
HNRNPC-233ENST00000557768 TNFSF18Q9UNG2 199 aa3.34□□□□□ -1.87
HNRNPC-233ENST00000557768 IGLV4-60A0A075B6I1 120 aa3.33□□□□□ -1.88
HNRNPC-233ENST00000557768 IGHV1-24A0A0C4DH33 117 aa3.33□□□□□ -1.88
HNRNPC-233ENST00000557768 IGKV2-24A0A0C4DH68 120 aa3.33□□□□□ -1.88
HNRNPC-233ENST00000557768 CTXND1A0A1B0GTU2 59 aa3.33□□□□□ -1.88
HNRNPC-233ENST00000557768 FAM240AA0A1B0GVK7 77 aa3.33□□□□□ -1.88
HNRNPC-233ENST00000557768 LTAP01374 205 aa3.33□□□□□ -1.88
HNRNPC-233ENST00000557768 UBE2G1P62253 170 aa3.33□□□□□ -1.88
HNRNPC-233ENST00000557768 COX6A2Q02221 97 aa3.33□□□□□ -1.88
HNRNPC-233ENST00000557768 TMEM97Q5BJF2 176 aa3.33□□□□□ -1.88
HNRNPC-233ENST00000557768 RPL7L1Q6DKI1 246 aaKnown RBP3.33□□□□□ -1.88
HNRNPC-233ENST00000557768 AQP10Q96PS8 301 aa3.33□□□□□ -1.88
HNRNPC-233ENST00000557768 ZNF471Q9BX82 626 aaPredicted RBP3.33□□□□□ -1.88
HNRNPC-233ENST00000557768 VAX2Q9UIW0 290 aa3.33□□□□□ -1.88
HNRNPC-233ENST00000557768 LPAP08519 4548 aa3.33□□□□□ -1.88
HNRNPC-233ENST00000557768 TRAV8-4A0A0B4J246 113 aa3.32□□□□□ -1.88
HNRNPC-233ENST00000557768 H0Y9J4 135 aa3.32□□□□□ -1.88
HNRNPC-233ENST00000557768 P01737 135 aa3.32□□□□□ -1.88
HNRNPC-233ENST00000557768 MGPP08493 103 aa3.32□□□□□ -1.88
HNRNPC-233ENST00000557768 KRTAP10-8P60410 259 aa3.32□□□□□ -1.88
HNRNPC-233ENST00000557768 IQCJQ1A5X6 159 aa3.32□□□□□ -1.88
HNRNPC-233ENST00000557768 Q5BKY6 102 aa3.32□□□□□ -1.88
HNRNPC-233ENST00000557768 SPANXN1Q5VSR9 72 aa3.32□□□□□ -1.88
HNRNPC-233ENST00000557768 LINC00299Q6ZSB3 139 aa3.32□□□□□ -1.88
HNRNPC-233ENST00000557768 SLC7A5P1Q8MH63 180 aa3.32□□□□□ -1.88
HNRNPC-233ENST00000557768 C15orf56Q8N910 161 aa3.32□□□□□ -1.88
HNRNPC-233ENST00000557768 NKX6-2Q9C056 277 aaPredicted RBP3.32□□□□□ -1.88
HNRNPC-233ENST00000557768 ALG5Q9Y673 324 aa3.32□□□□□ -1.88
HNRNPC-233ENST00000557768 BORCS7-ASMTA0A0B4J1R7 106 aa3.31□□□□□ -1.88
HNRNPC-233ENST00000557768 IGKV3OR2-268A0A0C4DH90 116 aa3.31□□□□□ -1.88
HNRNPC-233ENST00000557768 MAP1LC3B2A6NCE7 125 aa3.31□□□□□ -1.88
HNRNPC-233ENST00000557768 SMLR1H3BR10 107 aa3.31□□□□□ -1.88
HNRNPC-233ENST00000557768 M0QY20 66 aa3.31□□□□□ -1.88
HNRNPC-233ENST00000557768 SMIM17P0DL12 118 aa3.31□□□□□ -1.88
HNRNPC-233ENST00000557768 AKR1C3P42330 323 aa3.31□□□□□ -1.88
HNRNPC-233ENST00000557768 RPS10P46783 165 aaKnown RBP3.31□□□□□ -1.88
HNRNPC-233ENST00000557768 SULT1A2P50226 295 aa3.31□□□□□ -1.88
HNRNPC-233ENST00000557768 NKX2-5P52952 324 aaPredicted RBP3.31□□□□□ -1.88
HNRNPC-233ENST00000557768 RPL23P62829 140 aaKnown RBP3.31□□□□□ -1.88
HNRNPC-233ENST00000557768 C5orf47Q569G3 176 aa3.31□□□□□ -1.88
HNRNPC-233ENST00000557768 STOML3Q8TAV4 291 aa3.31□□□□□ -1.88
HNRNPC-233ENST00000557768 TMEM243Q9BU79 118 aa3.31□□□□□ -1.88
HNRNPC-233ENST00000557768 MAP1LC3BQ9GZQ8 125 aa3.31□□□□□ -1.88
HNRNPC-233ENST00000557768 A0A096LNI7 61 aa3.3□□□□□ -1.88
HNRNPC-233ENST00000557768 CXCL1P09341 107 aa3.3□□□□□ -1.88
HNRNPC-233ENST00000557768 GZMBP10144 247 aa3.3□□□□□ -1.88
HNRNPC-233ENST00000557768 DEFA1P59665 94 aa3.3□□□□□ -1.88
HNRNPC-233ENST00000557768 AKR1C8PQ5T2L2 129 aa3.3□□□□□ -1.88
HNRNPC-233ENST00000557768 SPINK6Q6UWN8 80 aa3.3□□□□□ -1.88
HNRNPC-233ENST00000557768 AP1S3Q96PC3 154 aa3.3□□□□□ -1.88
HNRNPC-233ENST00000557768 FXYD6-FXYD2A0A087WZ82 144 aa3.29□□□□□ -1.88
HNRNPC-233ENST00000557768 A0A1B0GV50 99 aa3.29□□□□□ -1.88
HNRNPC-233ENST00000557768 UBE2L6O14933 153 aa3.29□□□□□ -1.88
HNRNPC-233ENST00000557768 RASL11AQ6T310 242 aa3.29□□□□□ -1.88
HNRNPC-233ENST00000557768 FAM19A1Q7Z5A9 133 aa3.29□□□□□ -1.88
HNRNPC-233ENST00000557768 BAGE2Q86Y30 109 aa3.29□□□□□ -1.88
HNRNPC-233ENST00000557768 PCP2Q8IVA1 136 aa3.29□□□□□ -1.88
HNRNPC-233ENST00000557768 LINC00526Q96FQ7 95 aa3.29□□□□□ -1.88
HNRNPC-233ENST00000557768 TCEAL7Q9BRU2 100 aa3.29□□□□□ -1.88
HNRNPC-233ENST00000557768 MED28Q9H204 178 aa3.29□□□□□ -1.88
HNRNPC-233ENST00000557768 GVQW2A0A096LPI5 108 aaPredicted RBP3.28□□□□□ -1.88
HNRNPC-233ENST00000557768 NDUFC2-KCTD14E9PQ53 114 aa3.28□□□□□ -1.88
HNRNPC-233ENST00000557768 BOD1L2Q8IYS8 172 aa3.28□□□□□ -1.88
HNRNPC-233ENST00000557768 FER1L6-AS1Q8NA97 138 aa3.28□□□□□ -1.88
HNRNPC-233ENST00000557768 NIT2Q9NQR4 276 aa3.28□□□□□ -1.88
HNRNPC-233ENST00000557768 CYTL1Q9NRR1 136 aa3.28□□□□□ -1.88
HNRNPC-233ENST00000557768 M0QXV9 152 aa3.27□□□□□ -1.89
HNRNPC-233ENST00000557768 PFDN1O60925 122 aa3.27□□□□□ -1.89
HNRNPC-233ENST00000557768 IGLC6P0CF74 106 aa3.27□□□□□ -1.89
HNRNPC-233ENST00000557768 RPL35P42766 123 aaKnown RBP3.27□□□□□ -1.89
HNRNPC-233ENST00000557768 AMMECR1LQ6DCA0 310 aa3.27□□□□□ -1.89
HNRNPC-233ENST00000557768 OR2D3Q8NGH3 330 aa3.27□□□□□ -1.89
HNRNPC-233ENST00000557768 FAM213BQ8TBF2 198 aa3.27□□□□□ -1.89
HNRNPC-233ENST00000557768 SFT2D1Q8WV19 159 aa3.27□□□□□ -1.89
HNRNPC-233ENST00000557768 CAMK2N2Q96S95 79 aa3.27□□□□□ -1.89
HNRNPC-233ENST00000557768 MUC2Q02817 5179 aa3.26□□□□□ -1.89
HNRNPC-233ENST00000557768 IGLV1-50A0A075B6I6 118 aa3.26□□□□□ -1.89
HNRNPC-233ENST00000557768 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.26□□□□□ -1.89
HNRNPC-233ENST00000557768 TRAV26-2A0A0B4J265 109 aa3.26□□□□□ -1.89
HNRNPC-233ENST00000557768 IGKV2-29A2NJV5 120 aaPredicted RBP3.26□□□□□ -1.89
HNRNPC-233ENST00000557768 G3V3Q6 166 aa3.26□□□□□ -1.89
HNRNPC-233ENST00000557768 ARPC5O15511 151 aa3.26□□□□□ -1.89
HNRNPC-233ENST00000557768 ZNF861PO60384 105 aa3.26□□□□□ -1.89
HNRNPC-233ENST00000557768 NTF3P20783 257 aa3.26□□□□□ -1.89
HNRNPC-233ENST00000557768 XCL1P47992 114 aa3.26□□□□□ -1.89
HNRNPC-233ENST00000557768 C6orf99Q4VX62 202 aa3.26□□□□□ -1.89
HNRNPC-233ENST00000557768 CENPWQ5EE01 88 aa3.26□□□□□ -1.89
HNRNPC-233ENST00000557768 LYZL1Q6UWQ5 148 aa3.26□□□□□ -1.89
HNRNPC-233ENST00000557768 KCNRGQ8N5I3 272 aa3.26□□□□□ -1.89
HNRNPC-233ENST00000557768 MBD3L1Q8WWY6 194 aa3.26□□□□□ -1.89
HNRNPC-233ENST00000557768 RPL39LQ96EH5 51 aaKnown RBP3.26□□□□□ -1.89
HNRNPC-233ENST00000557768 CARD19Q96LW7 228 aa3.26□□□□□ -1.89
HNRNPC-233ENST00000557768 LINC00474Q9P2X8 69 aa3.26□□□□□ -1.89
HNRNPC-233ENST00000557768 IGHV1-58A0A0C4DH39 117 aa3.25□□□□□ -1.89
HNRNPC-233ENST00000557768 A0A1B0GVX0 72 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms