RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 PRR4Q16378 134 aa14.57□□□□□ -0.08
FOXA1-204ENST00000554607 C10orf25Q5T742 122 aa14.57□□□□□ -0.08
FOXA1-204ENST00000554607 MUC2Q02817 5179 aa14.56□□□□□ -0.08
FOXA1-204ENST00000554607 LINC00862A6NCI5 91 aa14.56□□□□□ -0.08
FOXA1-204ENST00000554607 ZNF727A8MUV8 499 aa14.56□□□□□ -0.08
FOXA1-204ENST00000554607 MRPL51Q4U2R6 128 aaKnown RBP14.56□□□□□ -0.08
FOXA1-204ENST00000554607 GAGE2EQ4V326 116 aa14.56□□□□□ -0.08
FOXA1-204ENST00000554607 FAM104BQ5XKR9 115 aa14.56□□□□□ -0.08
FOXA1-204ENST00000554607 UNQ6190/PRO20217Q6UXQ8 127 aa14.56□□□□□ -0.08
FOXA1-204ENST00000554607 C6orf48Q9UBA6 75 aa14.56□□□□□ -0.08
FOXA1-204ENST00000554607 GAGE2DQ9UEU5 116 aa14.56□□□□□ -0.08
FOXA1-204ENST00000554607 RPL32P62910 135 aaKnown RBP14.55□□□□□ -0.08
FOXA1-204ENST00000554607 UBE2BP63146 152 aa14.55□□□□□ -0.08
FOXA1-204ENST00000554607 EIF5A2Q9GZV4 153 aaKnown RBP14.55□□□□□ -0.08
FOXA1-204ENST00000554607 SMDT1Q9H4I9 107 aa14.55□□□□□ -0.08
FOXA1-204ENST00000554607 SPANXA1Q9NS26 97 aa14.55□□□□□ -0.08
FOXA1-204ENST00000554607 NAT8BQ9UHF3 227 aa14.55□□□□□ -0.08
FOXA1-204ENST00000554607 V9GYV3 84 aa14.55□□□□□ -0.08
FOXA1-204ENST00000554607 TRBV24-1A0A075B6N3 115 aa14.54□□□□□ -0.08
FOXA1-204ENST00000554607 A0A0U1RQV1 116 aa14.54□□□□□ -0.08
FOXA1-204ENST00000554607 RPL39P62891 51 aaKnown RBP14.54□□□□□ -0.08
FOXA1-204ENST00000554607 MRPS36P82909 103 aaKnown RBP14.54□□□□□ -0.08
FOXA1-204ENST00000554607 HBBP68871 147 aa14.53□□□□□ -0.08
FOXA1-204ENST00000554607 ALKAL2Q6UX46 152 aa14.53□□□□□ -0.08
FOXA1-204ENST00000554607 IFITM10A6NMD0 228 aa14.52□□□□□ -0.09
FOXA1-204ENST00000554607 M0QXV9 152 aa14.52□□□□□ -0.09
FOXA1-204ENST00000554607 CKS2P33552 79 aa14.52□□□□□ -0.09
FOXA1-204ENST00000554607 FAM104AQ969W3 186 aa14.52□□□□□ -0.09
FOXA1-204ENST00000554607 CARHSP1Q9Y2V2 147 aaKnown RBP14.51□□□□□ -0.09
FOXA1-204ENST00000554607 TGIF2-C20orf24A0A0A6YYL0 155 aa14.5□□□□□ -0.09
FOXA1-204ENST00000554607 KRTAP7-1Q8IUC3 87 aa14.49□□□□□ -0.09
FOXA1-204ENST00000554607 TRBV30A0A0K0K1B3 111 aa14.48□□□□□ -0.09
FOXA1-204ENST00000554607 A0A1B0GW15 77 aa14.48□□□□□ -0.09
FOXA1-204ENST00000554607 TNFRSF6BO95407 300 aa14.48□□□□□ -0.09
FOXA1-204ENST00000554607 SMIM2Q9BVW6 85 aa14.48□□□□□ -0.09
FOXA1-204ENST00000554607 SRP19P09132 144 aaKnown RBP14.47□□□□□ -0.09
FOXA1-204ENST00000554607 KIAA0087Q14695 138 aa14.47□□□□□ -0.09
FOXA1-204ENST00000554607 FAM74A3Q4VXF1 159 aa14.47□□□□□ -0.09
FOXA1-204ENST00000554607 NDUFC2-KCTD14E9PQ53 114 aa14.46□□□□□ -0.09
FOXA1-204ENST00000554607 PACRGQ96M98 296 aaPredicted RBP14.45□□□□□ -0.1
FOXA1-204ENST00000554607 SMIM27A0A1W2PRY6 76 aa14.44□□□□□ -0.1
FOXA1-204ENST00000554607 ZNF861PO60384 105 aa14.43□□□□□ -0.1
FOXA1-204ENST00000554607 IFI27P40305 119 aaPredicted RBP14.43□□□□□ -0.1
FOXA1-204ENST00000554607 D6R8Y8 96 aa14.42□□□□□ -0.1
FOXA1-204ENST00000554607 S100A8P05109 93 aa14.42□□□□□ -0.1
FOXA1-204ENST00000554607 C9orf129Q5T035 196 aaKnown RBP14.42□□□□□ -0.1
FOXA1-204ENST00000554607 F8W036 122 aa14.41□□□□□ -0.1
FOXA1-204ENST00000554607 RPL23P62829 140 aaKnown RBP14.41□□□□□ -0.1
FOXA1-204ENST00000554607 LINC00242Q5T6M2 205 aa14.41□□□□□ -0.1
FOXA1-204ENST00000554607 C2orf82Q6UX34 121 aa14.41□□□□□ -0.1
FOXA1-204ENST00000554607 PPBPP02775 128 aa14.4□□□□□ -0.1
FOXA1-204ENST00000554607 RAB5AP20339 215 aa14.4□□□□□ -0.1
FOXA1-204ENST00000554607 PYGO1Q9Y3Y4 419 aa14.4□□□□□ -0.1
FOXA1-204ENST00000554607 NUPR1O60356 82 aa14.39□□□□□ -0.11
FOXA1-204ENST00000554607 NPYP01303 97 aa14.39□□□□□ -0.11
FOXA1-204ENST00000554607 ADIRFQ15847 76 aa14.39□□□□□ -0.11
FOXA1-204ENST00000554607 LINC01561Q8N1V8 128 aa14.39□□□□□ -0.11
FOXA1-204ENST00000554607 KRTAP9-2Q9BYQ4 174 aa14.38□□□□□ -0.11
FOXA1-204ENST00000554607 TMEM141Q96I45 108 aa14.37□□□□□ -0.11
FOXA1-204ENST00000554607 IGLV4-3A0A075B6K6 122 aa14.36□□□□□ -0.11
FOXA1-204ENST00000554607 TSPAN13O95857 204 aa14.36□□□□□ -0.11
FOXA1-204ENST00000554607 LBHQ53QV2 105 aaPredicted RBP14.36□□□□□ -0.11
FOXA1-204ENST00000554607 NAT8Q9UHE5 227 aa14.36□□□□□ -0.11
FOXA1-204ENST00000554607 PRSS2P07478 247 aa14.34□□□□□ -0.11
FOXA1-204ENST00000554607 MRPL54Q6P161 138 aaKnown RBP14.34□□□□□ -0.11
FOXA1-204ENST00000554607 TEX43Q6ZNM6 134 aa14.34□□□□□ -0.11
FOXA1-204ENST00000554607 AKAP14Q86UN6 197 aa14.34□□□□□ -0.11
FOXA1-204ENST00000554607 C22orf24Q9Y442 160 aa14.34□□□□□ -0.11
FOXA1-204ENST00000554607 ORMDL3Q8N138 153 aa14.33□□□□□ -0.12
FOXA1-204ENST00000554607 C2orf88Q9BSF0 95 aa14.33□□□□□ -0.12
FOXA1-204ENST00000554607 CKS1BP61024 79 aa14.32□□□□□ -0.12
FOXA1-204ENST00000554607 A0A1B0GXF2 115 aa14.31□□□□□ -0.12
FOXA1-204ENST00000554607 Q6ZN92 141 aa14.31□□□□□ -0.12
FOXA1-204ENST00000554607 CTDSP1Q9GZU7 261 aa14.31□□□□□ -0.12
FOXA1-204ENST00000554607 C6orf226Q5I0X4 101 aa14.3□□□□□ -0.12
FOXA1-204ENST00000554607 TMEM136Q6ZRR5 245 aa14.3□□□□□ -0.12
FOXA1-204ENST00000554607 RPL28P46779 137 aaKnown RBP14.29□□□□□ -0.12
FOXA1-204ENST00000554607 LINC00469Q8N7U9 141 aa14.29□□□□□ -0.12
FOXA1-204ENST00000554607 PRELID3AQ96N28 172 aa14.29□□□□□ -0.12
FOXA1-204ENST00000554607 TOMM7Q9P0U1 55 aa14.29□□□□□ -0.12
FOXA1-204ENST00000554607 CRYGAP11844 174 aa14.28□□□□□ -0.12
FOXA1-204ENST00000554607 Q8IZM0 81 aa14.27□□□□□ -0.13
FOXA1-204ENST00000554607 TYMSOSQ8TAI1 123 aa14.27□□□□□ -0.13
FOXA1-204ENST00000554607 VCX2Q9H322 139 aa14.27□□□□□ -0.13
FOXA1-204ENST00000554607 TP73-AS1Q9UF72 201 aa14.27□□□□□ -0.13
FOXA1-204ENST00000554607 PRSS47A8MTI9 375 aa14.26□□□□□ -0.13
FOXA1-204ENST00000554607 XAGE1AQ9HD64 81 aa14.26□□□□□ -0.13
FOXA1-204ENST00000554607 FAT4Q6V0I7 4981 aa14.26□□□□□ -0.13
FOXA1-204ENST00000554607 A0A087X002 238 aa14.25□□□□□ -0.13
FOXA1-204ENST00000554607 BCE1O60756 84 aa14.25□□□□□ -0.13
FOXA1-204ENST00000554607 ALKBH7Q9BT30 221 aaPredicted RBP14.25□□□□□ -0.13
FOXA1-204ENST00000554607 CYSLTR1Q9Y271 337 aa14.25□□□□□ -0.13
FOXA1-204ENST00000554607 C9JQL5 133 aa14.24□□□□□ -0.13
FOXA1-204ENST00000554607 ATP5L2Q7Z4Y8 100 aa14.24□□□□□ -0.13
FOXA1-204ENST00000554607 MRPL55Q7Z7F7 128 aaKnown RBP14.24□□□□□ -0.13
FOXA1-204ENST00000554607 AMELXQ99217 191 aa14.24□□□□□ -0.13
FOXA1-204ENST00000554607 LAMTOR2Q9Y2Q5 125 aa14.24□□□□□ -0.13
FOXA1-204ENST00000554607 PEA15Q15121 130 aa14.23□□□□□ -0.13
FOXA1-204ENST00000554607 LCE2AQ5TA79 106 aaPredicted RBP14.23□□□□□ -0.13
FOXA1-204ENST00000554607 MAP1LC3AQ9H492 121 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms