RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 RIGQ13278 110 aa8.5□□□□□ -1.05
CHMP1A-210ENST00000551981 SMDT1Q9H4I9 107 aa8.5□□□□□ -1.05
CHMP1A-210ENST00000551981 CARHSP1Q9Y2V2 147 aaKnown RBP8.5□□□□□ -1.05
CHMP1A-210ENST00000551981 IGHV3OR16-9A0A0B4J2B5 98 aa8.49□□□□□ -1.05
CHMP1A-210ENST00000551981 TCAPO15273 167 aa8.49□□□□□ -1.05
CHMP1A-210ENST00000551981 C10orf25Q5T742 122 aa8.49□□□□□ -1.05
CHMP1A-210ENST00000551981 UNQ6190/PRO20217Q6UXQ8 127 aa8.49□□□□□ -1.05
CHMP1A-210ENST00000551981 C6orf48Q9UBA6 75 aa8.49□□□□□ -1.05
CHMP1A-210ENST00000551981 SPANXA1Q9NS26 97 aa8.48□□□□□ -1.05
CHMP1A-210ENST00000551981 IFITM10A6NMD0 228 aa8.47□□□□□ -1.05
CHMP1A-210ENST00000551981 HBBP68871 147 aa8.47□□□□□ -1.05
CHMP1A-210ENST00000551981 LINC01551Q86U37 167 aa8.47□□□□□ -1.05
CHMP1A-210ENST00000551981 SMIM7Q9BQ49 75 aa8.47□□□□□ -1.05
CHMP1A-210ENST00000551981 C20orf78Q9BR46 151 aa8.47□□□□□ -1.05
CHMP1A-210ENST00000551981 OSTCQ9NRP0 149 aa8.47□□□□□ -1.05
CHMP1A-210ENST00000551981 TGIF2-C20orf24A0A0A6YYL0 155 aa8.46□□□□□ -1.06
CHMP1A-210ENST00000551981 RPL39P62891 51 aaKnown RBP8.46□□□□□ -1.06
CHMP1A-210ENST00000551981 TRBV30A0A0K0K1B3 111 aa8.45□□□□□ -1.06
CHMP1A-210ENST00000551981 RPL32P62910 135 aaKnown RBP8.45□□□□□ -1.06
CHMP1A-210ENST00000551981 BLOC1S1P78537 153 aa8.45□□□□□ -1.06
CHMP1A-210ENST00000551981 MRPS36P82909 103 aaKnown RBP8.45□□□□□ -1.06
CHMP1A-210ENST00000551981 MRPL51Q4U2R6 128 aaKnown RBP8.45□□□□□ -1.06
CHMP1A-210ENST00000551981 KRTAP7-1Q8IUC3 87 aa8.45□□□□□ -1.06
CHMP1A-210ENST00000551981 LINC00862A6NCI5 91 aa8.44□□□□□ -1.06
CHMP1A-210ENST00000551981 NDUFC2-KCTD14E9PQ53 114 aa8.44□□□□□ -1.06
CHMP1A-210ENST00000551981 ZNF861PO60384 105 aa8.44□□□□□ -1.06
CHMP1A-210ENST00000551981 TSPAN13O95857 204 aa8.44□□□□□ -1.06
CHMP1A-210ENST00000551981 CKS2P33552 79 aa8.44□□□□□ -1.06
CHMP1A-210ENST00000551981 FAM104BQ5XKR9 115 aa8.44□□□□□ -1.06
CHMP1A-210ENST00000551981 NAT8BQ9UHF3 227 aa8.44□□□□□ -1.06
CHMP1A-210ENST00000551981 TRBV24-1A0A075B6N3 115 aa8.43□□□□□ -1.06
CHMP1A-210ENST00000551981 ZNF727A8MUV8 499 aa8.43□□□□□ -1.06
CHMP1A-210ENST00000551981 FAM104AQ969W3 186 aa8.43□□□□□ -1.06
CHMP1A-210ENST00000551981 PACRGQ96M98 296 aaPredicted RBP8.43□□□□□ -1.06
CHMP1A-210ENST00000551981 EIF5A2Q9GZV4 153 aaKnown RBP8.43□□□□□ -1.06
CHMP1A-210ENST00000551981 V9GYV3 84 aa8.43□□□□□ -1.06
CHMP1A-210ENST00000551981 KIAA0087Q14695 138 aa8.42□□□□□ -1.06
CHMP1A-210ENST00000551981 C9orf129Q5T035 196 aaKnown RBP8.42□□□□□ -1.06
CHMP1A-210ENST00000551981 TCTE3Q8IZS6 198 aa8.42□□□□□ -1.06
CHMP1A-210ENST00000551981 SMIM2Q9BVW6 85 aa8.42□□□□□ -1.06
CHMP1A-210ENST00000551981 NUPR1O60356 82 aa8.41□□□□□ -1.06
CHMP1A-210ENST00000551981 TNFRSF6BO95407 300 aa8.41□□□□□ -1.06
CHMP1A-210ENST00000551981 A0A1B0GW15 77 aa8.4□□□□□ -1.06
CHMP1A-210ENST00000551981 IFI27P40305 119 aaPredicted RBP8.4□□□□□ -1.06
CHMP1A-210ENST00000551981 LCE2AQ5TA79 106 aaPredicted RBP8.4□□□□□ -1.06
CHMP1A-210ENST00000551981 C2orf82Q6UX34 121 aa8.4□□□□□ -1.06
CHMP1A-210ENST00000551981 FAM74A3Q4VXF1 159 aa8.39□□□□□ -1.07
CHMP1A-210ENST00000551981 LBHQ53QV2 105 aaPredicted RBP8.39□□□□□ -1.07
CHMP1A-210ENST00000551981 ALKAL2Q6UX46 152 aa8.39□□□□□ -1.07
CHMP1A-210ENST00000551981 KRTAP9-6A0A140TA67 174 aa8.38□□□□□ -1.07
CHMP1A-210ENST00000551981 D6R8Y8 96 aa8.38□□□□□ -1.07
CHMP1A-210ENST00000551981 LINC00242Q5T6M2 205 aa8.38□□□□□ -1.07
CHMP1A-210ENST00000551981 F8W036 122 aa8.37□□□□□ -1.07
CHMP1A-210ENST00000551981 S100A8P05109 93 aa8.37□□□□□ -1.07
CHMP1A-210ENST00000551981 PRSS2P07478 247 aa8.37□□□□□ -1.07
CHMP1A-210ENST00000551981 CRYGAP11844 174 aa8.37□□□□□ -1.07
CHMP1A-210ENST00000551981 RAB5AP20339 215 aa8.37□□□□□ -1.07
CHMP1A-210ENST00000551981 RPL28P46779 137 aaKnown RBP8.37□□□□□ -1.07
CHMP1A-210ENST00000551981 LINC01561Q8N1V8 128 aa8.37□□□□□ -1.07
CHMP1A-210ENST00000551981 TYMSOSQ8TAI1 123 aa8.37□□□□□ -1.07
CHMP1A-210ENST00000551981 CTDSP1Q9GZU7 261 aa8.37□□□□□ -1.07
CHMP1A-210ENST00000551981 PYGO1Q9Y3Y4 419 aa8.37□□□□□ -1.07
CHMP1A-210ENST00000551981 C22orf24Q9Y442 160 aa8.37□□□□□ -1.07
CHMP1A-210ENST00000551981 SMIM27A0A1W2PRY6 76 aa8.36□□□□□ -1.07
CHMP1A-210ENST00000551981 CKS1BP61024 79 aa8.36□□□□□ -1.07
CHMP1A-210ENST00000551981 TMEM141Q96I45 108 aa8.36□□□□□ -1.07
CHMP1A-210ENST00000551981 IGLV4-3A0A075B6K6 122 aa8.35□□□□□ -1.07
CHMP1A-210ENST00000551981 A0A087X002 238 aa8.35□□□□□ -1.07
CHMP1A-210ENST00000551981 NPYP01303 97 aa8.35□□□□□ -1.07
CHMP1A-210ENST00000551981 PPBPP02775 128 aa8.35□□□□□ -1.07
CHMP1A-210ENST00000551981 SRP19P09132 144 aaKnown RBP8.35□□□□□ -1.07
CHMP1A-210ENST00000551981 TEX43Q6ZNM6 134 aa8.35□□□□□ -1.07
CHMP1A-210ENST00000551981 C2orf88Q9BSF0 95 aa8.35□□□□□ -1.07
CHMP1A-210ENST00000551981 MUC17Q685J3 4493 aa8.34□□□□□ -1.07
CHMP1A-210ENST00000551981 BCE1O60756 84 aa8.34□□□□□ -1.07
CHMP1A-210ENST00000551981 RPL23P62829 140 aaKnown RBP8.34□□□□□ -1.07
CHMP1A-210ENST00000551981 ADIRFQ15847 76 aa8.34□□□□□ -1.07
CHMP1A-210ENST00000551981 LINC00469Q8N7U9 141 aa8.34□□□□□ -1.07
CHMP1A-210ENST00000551981 TOMM7Q9P0U1 55 aa8.34□□□□□ -1.07
CHMP1A-210ENST00000551981 C6orf226Q5I0X4 101 aa8.33□□□□□ -1.08
CHMP1A-210ENST00000551981 Q6ZN92 141 aa8.33□□□□□ -1.08
CHMP1A-210ENST00000551981 XAGE1AQ9HD64 81 aa8.33□□□□□ -1.08
CHMP1A-210ENST00000551981 MRPL54Q6P161 138 aaKnown RBP8.32□□□□□ -1.08
CHMP1A-210ENST00000551981 MRPL55Q7Z7F7 128 aaKnown RBP8.32□□□□□ -1.08
CHMP1A-210ENST00000551981 Q8IZM0 81 aa8.32□□□□□ -1.08
CHMP1A-210ENST00000551981 ORMDL3Q8N138 153 aa8.32□□□□□ -1.08
CHMP1A-210ENST00000551981 TP73-AS1Q9UF72 201 aa8.32□□□□□ -1.08
CHMP1A-210ENST00000551981 CDIP1Q9H305 208 aa8.31□□□□□ -1.08
CHMP1A-210ENST00000551981 NAT8Q9UHE5 227 aa8.31□□□□□ -1.08
CHMP1A-210ENST00000551981 TMEM136Q6ZRR5 245 aa8.3□□□□□ -1.08
CHMP1A-210ENST00000551981 PRELID3AQ96N28 172 aa8.3□□□□□ -1.08
CHMP1A-210ENST00000551981 ALKBH7Q9BT30 221 aaPredicted RBP8.3□□□□□ -1.08
CHMP1A-210ENST00000551981 A0A1B0GXF2 115 aa8.29□□□□□ -1.08
CHMP1A-210ENST00000551981 RETNLBQ9BQ08 111 aa8.29□□□□□ -1.08
CHMP1A-210ENST00000551981 VCX2Q9H322 139 aa8.29□□□□□ -1.08
CHMP1A-210ENST00000551981 CYSLTR1Q9Y271 337 aa8.29□□□□□ -1.08
CHMP1A-210ENST00000551981 F8VRH5 84 aa8.28□□□□□ -1.08
CHMP1A-210ENST00000551981 LINC00304Q8N9R0 145 aa8.28□□□□□ -1.08
CHMP1A-210ENST00000551981 TPRXLQ17RH7 258 aa8.27□□□□□ -1.09
CHMP1A-210ENST00000551981 FAM229BQ4G0N7 80 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms