RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 COX7A2LO14548 114 aa11.25□□□□□ -0.61
CDK4-208ENST00000551706 PAPPA-AS1Q5QFB9 102 aa11.25□□□□□ -0.61
CDK4-208ENST00000551706 TEX43Q6ZNM6 134 aa11.25□□□□□ -0.61
CDK4-208ENST00000551706 TOMM6Q96B49 74 aa11.25□□□□□ -0.61
CDK4-208ENST00000551706 C2orf88Q9BSF0 95 aa11.25□□□□□ -0.61
CDK4-208ENST00000551706 IGIPA6NJ69 53 aa11.24□□□□□ -0.61
CDK4-208ENST00000551706 MALP21145 153 aa11.24□□□□□ -0.61
CDK4-208ENST00000551706 C9orf163Q8N9P6 203 aa11.24□□□□□ -0.61
CDK4-208ENST00000551706 J3QL48 77 aa11.23□□□□□ -0.61
CDK4-208ENST00000551706 LINC01620Q4KN68 170 aa11.23□□□□□ -0.61
CDK4-208ENST00000551706 TIMM17AQ99595 171 aa11.23□□□□□ -0.61
CDK4-208ENST00000551706 VCX2Q9H322 139 aa11.23□□□□□ -0.61
CDK4-208ENST00000551706 TRGC2P03986 189 aa11.22□□□□□ -0.61
CDK4-208ENST00000551706 XGP55808 180 aa11.22□□□□□ -0.61
CDK4-208ENST00000551706 HIGD2BQ4VC39 106 aa11.22□□□□□ -0.61
CDK4-208ENST00000551706 Q6ZSA8 131 aa11.22□□□□□ -0.61
CDK4-208ENST00000551706 C18orf32Q8TCD1 76 aa11.22□□□□□ -0.61
CDK4-208ENST00000551706 APOMO95445 188 aa11.21□□□□□ -0.61
CDK4-208ENST00000551706 RAB5BP61020 215 aa11.21□□□□□ -0.61
CDK4-208ENST00000551706 ERASQ7Z444 233 aa11.21□□□□□ -0.61
CDK4-208ENST00000551706 AMELXQ99217 191 aa11.21□□□□□ -0.61
CDK4-208ENST00000551706 IGHV3OR16-9A0A0B4J2B5 98 aa11.2□□□□□ -0.62
CDK4-208ENST00000551706 ZNF561-AS1K7EIQ3 104 aa11.2□□□□□ -0.62
CDK4-208ENST00000551706 LINC00614P0C842 121 aa11.2□□□□□ -0.62
CDK4-208ENST00000551706 C5orf38Q86SI9 138 aa11.2□□□□□ -0.62
CDK4-208ENST00000551706 SCGB3A1Q96QR1 104 aa11.2□□□□□ -0.62
CDK4-208ENST00000551706 FAM30AQ9NZY2 134 aa11.2□□□□□ -0.62
CDK4-208ENST00000551706 SLPIP03973 132 aa11.19□□□□□ -0.62
CDK4-208ENST00000551706 UBE2D1P51668 147 aa11.19□□□□□ -0.62
CDK4-208ENST00000551706 DNAH8Q96JB1 4490 aa11.18□□□□□ -0.62
CDK4-208ENST00000551706 IGHV3-64A0A075B6Q5 118 aa11.18□□□□□ -0.62
CDK4-208ENST00000551706 LINC00242Q5T6M2 205 aa11.18□□□□□ -0.62
CDK4-208ENST00000551706 LINC00173Q6ZV60 143 aa11.18□□□□□ -0.62
CDK4-208ENST00000551706 SEC11AP67812 179 aa11.16□□□□□ -0.62
CDK4-208ENST00000551706 SDIM1Q6ZPB5 146 aa11.16□□□□□ -0.62
CDK4-208ENST00000551706 OR10D4PQ8NGN7 298 aa11.16□□□□□ -0.62
CDK4-208ENST00000551706 TMA7Q9Y2S6 64 aaKnown RBP11.16□□□□□ -0.62
CDK4-208ENST00000551706 HMCN2Q8NDA2 5059 aa11.15□□□□□ -0.62
CDK4-208ENST00000551706 A0A087WZ39 114 aa11.15□□□□□ -0.62
CDK4-208ENST00000551706 ZC2HC1BQ5TFG8 222 aa11.15□□□□□ -0.62
CDK4-208ENST00000551706 FAM19A3Q7Z5A8 133 aa11.15□□□□□ -0.62
CDK4-208ENST00000551706 URB1-AS1Q96HZ7 61 aa11.15□□□□□ -0.62
CDK4-208ENST00000551706 CHAC1Q9BUX1 264 aa11.15□□□□□ -0.62
CDK4-208ENST00000551706 PKIGQ9Y2B9 76 aa11.15□□□□□ -0.62
CDK4-208ENST00000551706 HBDP02042 147 aa11.14□□□□□ -0.63
CDK4-208ENST00000551706 LINC01561Q8N1V8 128 aa11.14□□□□□ -0.63
CDK4-208ENST00000551706 C2orf48Q96LS8 159 aa11.14□□□□□ -0.63
CDK4-208ENST00000551706 CARD19Q96LW7 228 aa11.14□□□□□ -0.63
CDK4-208ENST00000551706 IGLV4-69A0A075B6H9 119 aa11.13□□□□□ -0.63
CDK4-208ENST00000551706 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.13□□□□□ -0.63
CDK4-208ENST00000551706 SMR3BP02814 79 aaPredicted RBP11.13□□□□□ -0.63
CDK4-208ENST00000551706 HERVK_113P63121 156 aa11.13□□□□□ -0.63
CDK4-208ENST00000551706 HAMPP81172 84 aa11.13□□□□□ -0.63
CDK4-208ENST00000551706 COX6A2Q02221 97 aa11.13□□□□□ -0.63
CDK4-208ENST00000551706 SPAG11BQ08648 103 aa11.13□□□□□ -0.63
CDK4-208ENST00000551706 SYCNQ0VAF6 134 aa11.13□□□□□ -0.63
CDK4-208ENST00000551706 ORAOV1Q8WV07 137 aa11.13□□□□□ -0.63
CDK4-208ENST00000551706 CHCHD1Q96BP2 118 aaKnown RBP11.13□□□□□ -0.63
CDK4-208ENST00000551706 LINC00526Q96FQ7 95 aa11.13□□□□□ -0.63
CDK4-208ENST00000551706 F8WDY8 70 aa11.12□□□□□ -0.63
CDK4-208ENST00000551706 FAM229AH3BQW9 127 aa11.12□□□□□ -0.63
CDK4-208ENST00000551706 SCXQ7RTU7 201 aa11.12□□□□□ -0.63
CDK4-208ENST00000551706 GEMIN7Q9H840 131 aaKnown RBP11.12□□□□□ -0.63
CDK4-208ENST00000551706 A0A096LNJ9 63 aa11.11□□□□□ -0.63
CDK4-208ENST00000551706 HIST1H2BKO60814 126 aa11.11□□□□□ -0.63
CDK4-208ENST00000551706 HIST1H2BJP06899 126 aa11.11□□□□□ -0.63
CDK4-208ENST00000551706 HIST1H2BOP23527 126 aa11.11□□□□□ -0.63
CDK4-208ENST00000551706 HIST1H2BBP33778 126 aa11.11□□□□□ -0.63
CDK4-208ENST00000551706 HIST1H2BDP58876 126 aa11.11□□□□□ -0.63
CDK4-208ENST00000551706 HIST1H2BCP62807 126 aa11.11□□□□□ -0.63
CDK4-208ENST00000551706 PMVKQ15126 192 aa11.11□□□□□ -0.63
CDK4-208ENST00000551706 HIST2H2BEQ16778 126 aa11.11□□□□□ -0.63
CDK4-208ENST00000551706 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.11□□□□□ -0.63
CDK4-208ENST00000551706 SERTAD4-AS1Q5TG53 156 aa11.11□□□□□ -0.63
CDK4-208ENST00000551706 HIST1H2BHQ93079 126 aa11.11□□□□□ -0.63
CDK4-208ENST00000551706 CAMK2N2Q96S95 79 aa11.11□□□□□ -0.63
CDK4-208ENST00000551706 HIST1H2BNQ99877 126 aa11.11□□□□□ -0.63
CDK4-208ENST00000551706 HIST1H2BMQ99879 126 aa11.11□□□□□ -0.63
CDK4-208ENST00000551706 ATP5LO75964 103 aa11.1□□□□□ -0.63
CDK4-208ENST00000551706 S100A6P06703 90 aa11.1□□□□□ -0.63
CDK4-208ENST00000551706 CST9LQ9H4G1 147 aa11.1□□□□□ -0.63
CDK4-208ENST00000551706 BAGE3Q86Y29 109 aa11.09□□□□□ -0.63
CDK4-208ENST00000551706 CIRBP-AS1Q8TBR5 109 aa11.09□□□□□ -0.63
CDK4-208ENST00000551706 TINCRA0A1B0GVN0 87 aa11.08□□□□□ -0.64
CDK4-208ENST00000551706 CIRBPQ14011 172 aaKnown RBP11.08□□□□□ -0.64
CDK4-208ENST00000551706 PMCHL1Q16048 86 aa11.08□□□□□ -0.64
CDK4-208ENST00000551706 PDZD11Q5EBL8 140 aa11.08□□□□□ -0.64
CDK4-208ENST00000551706 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.08□□□□□ -0.64
CDK4-208ENST00000551706 A0A0J9YXV3 536 aa11.07□□□□□ -0.64
CDK4-208ENST00000551706 HSBP1O75506 76 aa11.07□□□□□ -0.64
CDK4-208ENST00000551706 NDUFA6P56556 154 aa11.07□□□□□ -0.64
CDK4-208ENST00000551706 Q6ZRU5 148 aa11.07□□□□□ -0.64
CDK4-208ENST00000551706 PACRGQ96M98 296 aaPredicted RBP11.07□□□□□ -0.64
CDK4-208ENST00000551706 CDKN2A-AS1Q9UH64 79 aa11.07□□□□□ -0.64
CDK4-208ENST00000551706 NDUFA1O15239 70 aa11.06□□□□□ -0.64
CDK4-208ENST00000551706 RNF151Q2KHN1 245 aa11.06□□□□□ -0.64
CDK4-208ENST00000551706 DPH3Q96FX2 82 aa11.06□□□□□ -0.64
CDK4-208ENST00000551706 MRPL35Q9NZE8 188 aaKnown RBP11.06□□□□□ -0.64
CDK4-208ENST00000551706 LINC00474Q9P2X8 69 aa11.06□□□□□ -0.64
CDK4-208ENST00000551706 LINC00469Q8N7U9 141 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms