RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 UNQ6190/PRO20217Q6UXQ8 127 aa7.01□□□□□ -1.29
PRPF40B-212ENST00000551111 ORAOV1Q8WV07 137 aa7.01□□□□□ -1.29
PRPF40B-212ENST00000551111 TRBV24-1A0A075B6N3 115 aa7□□□□□ -1.29
PRPF40B-212ENST00000551111 SMIM27A0A1W2PRY6 76 aa7□□□□□ -1.29
PRPF40B-212ENST00000551111 TCAPO15273 167 aa7□□□□□ -1.29
PRPF40B-212ENST00000551111 TNFRSF6BO95407 300 aa7□□□□□ -1.29
PRPF40B-212ENST00000551111 NPYP01303 97 aa7□□□□□ -1.29
PRPF40B-212ENST00000551111 ADIRFQ15847 76 aa7□□□□□ -1.29
PRPF40B-212ENST00000551111 TMEM241Q24JQ0 296 aa7□□□□□ -1.29
PRPF40B-212ENST00000551111 RNF151Q2KHN1 245 aa7□□□□□ -1.29
PRPF40B-212ENST00000551111 C6orf48Q9UBA6 75 aa7□□□□□ -1.29
PRPF40B-212ENST00000551111 NAT8BQ9UHF3 227 aa7□□□□□ -1.29
PRPF40B-212ENST00000551111 IGLV7-43P04211 117 aa6.99□□□□□ -1.29
PRPF40B-212ENST00000551111 CKS2P33552 79 aa6.99□□□□□ -1.29
PRPF40B-212ENST00000551111 MRPL54Q6P161 138 aaKnown RBP6.99□□□□□ -1.29
PRPF40B-212ENST00000551111 C20orf78Q9BR46 151 aa6.99□□□□□ -1.29
PRPF40B-212ENST00000551111 SMIM2Q9BVW6 85 aa6.99□□□□□ -1.29
PRPF40B-212ENST00000551111 MRPL35Q9NZE8 188 aaKnown RBP6.99□□□□□ -1.29
PRPF40B-212ENST00000551111 D6R8Y8 96 aa6.98□□□□□ -1.29
PRPF40B-212ENST00000551111 PPP1R2P9O14990 202 aa6.98□□□□□ -1.29
PRPF40B-212ENST00000551111 PPP1R17O96001 155 aa6.98□□□□□ -1.29
PRPF40B-212ENST00000551111 RPL32P62910 135 aaKnown RBP6.98□□□□□ -1.29
PRPF40B-212ENST00000551111 KIAA0087Q14695 138 aa6.98□□□□□ -1.29
PRPF40B-212ENST00000551111 FAM19A5Q7Z5A7 132 aaPredicted RBP6.98□□□□□ -1.29
PRPF40B-212ENST00000551111 OR10D4PQ8NGN7 298 aa6.98□□□□□ -1.29
PRPF40B-212ENST00000551111 A0A087WZ39 114 aa6.97□□□□□ -1.29
PRPF40B-212ENST00000551111 LINC00862A6NCI5 91 aa6.97□□□□□ -1.29
PRPF40B-212ENST00000551111 KRTAP1-4P0C5Y4 121 aa6.97□□□□□ -1.29
PRPF40B-212ENST00000551111 GAGE2EQ4V326 116 aa6.97□□□□□ -1.29
PRPF40B-212ENST00000551111 ZC2HC1BQ5TFG8 222 aa6.97□□□□□ -1.29
PRPF40B-212ENST00000551111 GAGE2DQ9UEU5 116 aa6.97□□□□□ -1.29
PRPF40B-212ENST00000551111 A0A1B0GVG6 124 aa6.96□□□□□ -1.3
PRPF40B-212ENST00000551111 A0A1B0GXF2 115 aa6.96□□□□□ -1.3
PRPF40B-212ENST00000551111 IFITM10A6NMD0 228 aa6.96□□□□□ -1.3
PRPF40B-212ENST00000551111 NDUFA1O15239 70 aa6.96□□□□□ -1.3
PRPF40B-212ENST00000551111 TLX1NBP0CAT3 122 aa6.96□□□□□ -1.3
PRPF40B-212ENST00000551111 MRPS36P82909 103 aaKnown RBP6.96□□□□□ -1.3
PRPF40B-212ENST00000551111 SMAGPQ0VAQ4 97 aa6.96□□□□□ -1.3
PRPF40B-212ENST00000551111 C2orf82Q6UX34 121 aa6.96□□□□□ -1.3
PRPF40B-212ENST00000551111 TMEM18Q96B42 140 aa6.96□□□□□ -1.3
PRPF40B-212ENST00000551111 NAT8Q9UHE5 227 aa6.96□□□□□ -1.3
PRPF40B-212ENST00000551111 H0Y9J4 135 aa6.95□□□□□ -1.3
PRPF40B-212ENST00000551111 LINC00242Q5T6M2 205 aa6.95□□□□□ -1.3
PRPF40B-212ENST00000551111 DIRC1Q969H9 104 aa6.95□□□□□ -1.3
PRPF40B-212ENST00000551111 IMMP2LQ96T52 175 aa6.95□□□□□ -1.3
PRPF40B-212ENST00000551111 SMDT1Q9H4I9 107 aa6.95□□□□□ -1.3
PRPF40B-212ENST00000551111 SPANXA1Q9NS26 97 aa6.95□□□□□ -1.3
PRPF40B-212ENST00000551111 MUC2Q02817 5179 aa6.95□□□□□ -1.3
PRPF40B-212ENST00000551111 IGLV4-3A0A075B6K6 122 aa6.94□□□□□ -1.3
PRPF40B-212ENST00000551111 HBBP68871 147 aa6.94□□□□□ -1.3
PRPF40B-212ENST00000551111 C9orf129Q5T035 196 aaKnown RBP6.94□□□□□ -1.3
PRPF40B-212ENST00000551111 A0A1B0GW15 77 aa6.92□□□□□ -1.3
PRPF40B-212ENST00000551111 F8WDY8 70 aa6.92□□□□□ -1.3
PRPF40B-212ENST00000551111 M0QXV9 152 aa6.92□□□□□ -1.3
PRPF40B-212ENST00000551111 LINC00173Q6ZV60 143 aa6.92□□□□□ -1.3
PRPF40B-212ENST00000551111 LOC389332A0A1B0GUA5 103 aa6.91□□□□□ -1.3
PRPF40B-212ENST00000551111 TMEM136Q6ZRR5 245 aa6.91□□□□□ -1.3
PRPF40B-212ENST00000551111 PRELID3AQ96N28 172 aa6.91□□□□□ -1.3
PRPF40B-212ENST00000551111 TGIF2-C20orf24A0A0A6YYL0 155 aa6.9□□□□□ -1.3
PRPF40B-212ENST00000551111 F8W036 122 aa6.9□□□□□ -1.3
PRPF40B-212ENST00000551111 UBE2D1P51668 147 aa6.9□□□□□ -1.3
PRPF40B-212ENST00000551111 LINC00469Q8N7U9 141 aa6.9□□□□□ -1.3
PRPF40B-212ENST00000551111 PYGO1Q9Y3Y4 419 aa6.9□□□□□ -1.3
PRPF40B-212ENST00000551111 NDUFC2-KCTD14E9PQ53 114 aa6.89□□□□□ -1.31
PRPF40B-212ENST00000551111 PPBPP02775 128 aa6.89□□□□□ -1.31
PRPF40B-212ENST00000551111 IFI27P40305 119 aaPredicted RBP6.89□□□□□ -1.31
PRPF40B-212ENST00000551111 UBE2BP63146 152 aa6.89□□□□□ -1.31
PRPF40B-212ENST00000551111 PEA15Q15121 130 aa6.89□□□□□ -1.31
PRPF40B-212ENST00000551111 ORMDL3Q8N138 153 aa6.89□□□□□ -1.31
PRPF40B-212ENST00000551111 TMEM141Q96I45 108 aa6.89□□□□□ -1.31
PRPF40B-212ENST00000551111 IGLV1-50A0A075B6I6 118 aa6.88□□□□□ -1.31
PRPF40B-212ENST00000551111 TRBV30A0A0K0K1B3 111 aa6.88□□□□□ -1.31
PRPF40B-212ENST00000551111 RAB5AP20339 215 aa6.88□□□□□ -1.31
PRPF40B-212ENST00000551111 PRSS47A8MTI9 375 aa6.87□□□□□ -1.31
PRPF40B-212ENST00000551111 S100A8P05109 93 aa6.87□□□□□ -1.31
PRPF40B-212ENST00000551111 AMELXQ99217 191 aa6.87□□□□□ -1.31
PRPF40B-212ENST00000551111 XAGE1AQ9HD64 81 aa6.87□□□□□ -1.31
PRPF40B-212ENST00000551111 TOMM7Q9P0U1 55 aa6.87□□□□□ -1.31
PRPF40B-212ENST00000551111 PRR4Q16378 134 aa6.86□□□□□ -1.31
PRPF40B-212ENST00000551111 C2orf66Q6UXQ4 117 aa6.86□□□□□ -1.31
PRPF40B-212ENST00000551111 TEX43Q6ZNM6 134 aa6.86□□□□□ -1.31
PRPF40B-212ENST00000551111 PACRGQ96M98 296 aaPredicted RBP6.86□□□□□ -1.31
PRPF40B-212ENST00000551111 C22orf24Q9Y442 160 aa6.86□□□□□ -1.31
PRPF40B-212ENST00000551111 IGIPA6NJ69 53 aa6.85□□□□□ -1.31
PRPF40B-212ENST00000551111 ATP5L2Q7Z4Y8 100 aa6.85□□□□□ -1.31
PRPF40B-212ENST00000551111 Q8N8P6 123 aa6.85□□□□□ -1.31
PRPF40B-212ENST00000551111 ZNF861PO60384 105 aa6.84□□□□□ -1.31
PRPF40B-212ENST00000551111 TSPAN13O95857 204 aa6.84□□□□□ -1.31
PRPF40B-212ENST00000551111 LINC01561Q8N1V8 128 aa6.84□□□□□ -1.31
PRPF40B-212ENST00000551111 MAP1LC3AQ9H492 121 aa6.84□□□□□ -1.31
PRPF40B-212ENST00000551111 CDKN2A-AS1Q9UH64 79 aa6.84□□□□□ -1.31
PRPF40B-212ENST00000551111 CYSLTR1Q9Y271 337 aa6.84□□□□□ -1.31
PRPF40B-212ENST00000551111 A0A087X002 238 aa6.83□□□□□ -1.32
PRPF40B-212ENST00000551111 Q6ZN92 141 aa6.83□□□□□ -1.32
PRPF40B-212ENST00000551111 VCX2Q9H322 139 aa6.83□□□□□ -1.32
PRPF40B-212ENST00000551111 C6orf226Q5I0X4 101 aa6.82□□□□□ -1.32
PRPF40B-212ENST00000551111 FAM19A3Q7Z5A8 133 aa6.82□□□□□ -1.32
PRPF40B-212ENST00000551111 Q8IZM0 81 aa6.82□□□□□ -1.32
PRPF40B-212ENST00000551111 C2orf88Q9BSF0 95 aa6.82□□□□□ -1.32
PRPF40B-212ENST00000551111 ALKBH7Q9BT30 221 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms