RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 ZC2HC1BQ5TFG8 222 aa8.21□□□□□ -1.1
ACTN1-206ENST00000544964 HIST1H2BHQ93079 126 aa8.21□□□□□ -1.1
ACTN1-206ENST00000544964 CHCHD1Q96BP2 118 aaKnown RBP8.21□□□□□ -1.1
ACTN1-206ENST00000544964 SCGB3A1Q96QR1 104 aa8.21□□□□□ -1.1
ACTN1-206ENST00000544964 HIST1H2BNQ99877 126 aa8.21□□□□□ -1.1
ACTN1-206ENST00000544964 HIST1H2BMQ99879 126 aa8.21□□□□□ -1.1
ACTN1-206ENST00000544964 FAM30AQ9NZY2 134 aa8.21□□□□□ -1.1
ACTN1-206ENST00000544964 TRAV8-4A0A0B4J246 113 aa8.2□□□□□ -1.1
ACTN1-206ENST00000544964 SERF1AO75920 110 aa8.2□□□□□ -1.1
ACTN1-206ENST00000544964 HBDP02042 147 aa8.2□□□□□ -1.1
ACTN1-206ENST00000544964 LINC00310P59036 64 aa8.2□□□□□ -1.1
ACTN1-206ENST00000544964 TMEM141Q96I45 108 aa8.2□□□□□ -1.1
ACTN1-206ENST00000544964 COX11Q9Y6N1 276 aa8.2□□□□□ -1.1
ACTN1-206ENST00000544964 TRAV13-1A0A0B4J241 112 aa8.19□□□□□ -1.1
ACTN1-206ENST00000544964 GAGE12HA6NDE8 117 aa8.19□□□□□ -1.1
ACTN1-206ENST00000544964 C1orf196B1AJZ1 125 aa8.19□□□□□ -1.1
ACTN1-206ENST00000544964 NUPR1O60356 82 aa8.19□□□□□ -1.1
ACTN1-206ENST00000544964 HSBP1O75506 76 aa8.19□□□□□ -1.1
ACTN1-206ENST00000544964 KRTAP26-1Q6PEX3 210 aa8.19□□□□□ -1.1
ACTN1-206ENST00000544964 ERASQ7Z444 233 aa8.19□□□□□ -1.1
ACTN1-206ENST00000544964 FAM19A2Q8N3H0 131 aa8.19□□□□□ -1.1
ACTN1-206ENST00000544964 CHCHD10Q8WYQ3 142 aaPredicted RBP8.19□□□□□ -1.1
ACTN1-206ENST00000544964 TIMM17AQ99595 171 aa8.19□□□□□ -1.1
ACTN1-206ENST00000544964 IFITM10A6NMD0 228 aa8.18□□□□□ -1.1
ACTN1-206ENST00000544964 LECT2O14960 151 aa8.18□□□□□ -1.1
ACTN1-206ENST00000544964 CCL25O15444 150 aa8.18□□□□□ -1.1
ACTN1-206ENST00000544964 XCL1P47992 114 aa8.18□□□□□ -1.1
ACTN1-206ENST00000544964 SS18Q15532 418 aa8.18□□□□□ -1.1
ACTN1-206ENST00000544964 TEX43Q6ZNM6 134 aa8.18□□□□□ -1.1
ACTN1-206ENST00000544964 Q6ZSA8 131 aa8.18□□□□□ -1.1
ACTN1-206ENST00000544964 BAALCQ8WXS3 180 aa8.18□□□□□ -1.1
ACTN1-206ENST00000544964 LINC01549A6NIU2 74 aa8.17□□□□□ -1.1
ACTN1-206ENST00000544964 FAM229AH3BQW9 127 aa8.17□□□□□ -1.1
ACTN1-206ENST00000544964 PDZD11Q5EBL8 140 aa8.17□□□□□ -1.1
ACTN1-206ENST00000544964 Q6ZN92 141 aa8.17□□□□□ -1.1
ACTN1-206ENST00000544964 LINC00173Q6ZV60 143 aa8.17□□□□□ -1.1
ACTN1-206ENST00000544964 VCX2Q9H322 139 aa8.17□□□□□ -1.1
ACTN1-206ENST00000544964 LRP1Q07954 4544 aaKnown RBP8.16□□□□□ -1.1
ACTN1-206ENST00000544964 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.16□□□□□ -1.1
ACTN1-206ENST00000544964 NPSP0C0P6 89 aa8.16□□□□□ -1.1
ACTN1-206ENST00000544964 AMELXQ99217 191 aa8.16□□□□□ -1.1
ACTN1-206ENST00000544964 NDUFA6P56556 154 aa8.15□□□□□ -1.1
ACTN1-206ENST00000544964 PAPPA-AS1Q5QFB9 102 aa8.15□□□□□ -1.1
ACTN1-206ENST00000544964 C2orf88Q9BSF0 95 aa8.15□□□□□ -1.1
ACTN1-206ENST00000544964 UBE2D1P51668 147 aa8.14□□□□□ -1.11
ACTN1-206ENST00000544964 FOXI1Q12951 378 aa8.14□□□□□ -1.11
ACTN1-206ENST00000544964 CD164L2Q6UWJ8 174 aa8.14□□□□□ -1.11
ACTN1-206ENST00000544964 USP17L23D6RBM5 183 aa8.13□□□□□ -1.11
ACTN1-206ENST00000544964 ATP5LO75964 103 aa8.13□□□□□ -1.11
ACTN1-206ENST00000544964 LINC00242Q5T6M2 205 aa8.13□□□□□ -1.11
ACTN1-206ENST00000544964 CST9LQ9H4G1 147 aa8.13□□□□□ -1.11
ACTN1-206ENST00000544964 FABP4P15090 132 aa8.12□□□□□ -1.11
ACTN1-206ENST00000544964 COX6A2Q02221 97 aa8.12□□□□□ -1.11
ACTN1-206ENST00000544964 PMVKQ15126 192 aa8.12□□□□□ -1.11
ACTN1-206ENST00000544964 C5orf38Q86SI9 138 aa8.12□□□□□ -1.11
ACTN1-206ENST00000544964 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.11□□□□□ -1.11
ACTN1-206ENST00000544964 A0A0J9YXV3 536 aa8.11□□□□□ -1.11
ACTN1-206ENST00000544964 COX7A2LO14548 114 aa8.11□□□□□ -1.11
ACTN1-206ENST00000544964 LEPROTL1O95214 131 aa8.11□□□□□ -1.11
ACTN1-206ENST00000544964 LINC01620Q4KN68 170 aa8.11□□□□□ -1.11
ACTN1-206ENST00000544964 COA6Q5JTJ3 125 aaKnown RBP8.11□□□□□ -1.11
ACTN1-206ENST00000544964 LINC00528Q8N1L1 170 aa8.11□□□□□ -1.11
ACTN1-206ENST00000544964 IFI27L1Q96BM0 104 aa8.11□□□□□ -1.11
ACTN1-206ENST00000544964 PRSS1P07477 247 aa8.1□□□□□ -1.11
ACTN1-206ENST00000544964 MALP21145 153 aa8.1□□□□□ -1.11
ACTN1-206ENST00000544964 C15orf56Q8N910 161 aa8.1□□□□□ -1.11
ACTN1-206ENST00000544964 FAT3Q8TDW7 4589 aa8.1□□□□□ -1.11
ACTN1-206ENST00000544964 HMCN2Q8NDA2 5059 aa8.1□□□□□ -1.11
ACTN1-206ENST00000544964 IGHV3OR16-9A0A0B4J2B5 98 aa8.09□□□□□ -1.11
ACTN1-206ENST00000544964 KRTAP10-4P60372 401 aaPredicted RBP8.09□□□□□ -1.11
ACTN1-206ENST00000544964 HIGD2BQ4VC39 106 aa8.09□□□□□ -1.11
ACTN1-206ENST00000544964 SCXQ7RTU7 201 aa8.09□□□□□ -1.11
ACTN1-206ENST00000544964 FAM19A3Q7Z5A8 133 aa8.09□□□□□ -1.11
ACTN1-206ENST00000544964 H0Y8G0 127 aa8.08□□□□□ -1.12
ACTN1-206ENST00000544964 PLA2G1BP04054 148 aaKnown RBP8.08□□□□□ -1.12
ACTN1-206ENST00000544964 C14orf177Q52M58 125 aa8.08□□□□□ -1.12
ACTN1-206ENST00000544964 GEMIN7Q9H840 131 aaKnown RBP8.08□□□□□ -1.12
ACTN1-206ENST00000544964 HSPB8Q9UJY1 196 aa8.08□□□□□ -1.12
ACTN1-206ENST00000544964 IGHV1-58A0A0C4DH39 117 aa8.07□□□□□ -1.12
ACTN1-206ENST00000544964 TINCRA0A1B0GVN0 87 aa8.07□□□□□ -1.12
ACTN1-206ENST00000544964 hDV102S1A0JD36 115 aa8.07□□□□□ -1.12
ACTN1-206ENST00000544964 KRTAP29-1A8MX34 341 aaPredicted RBP8.07□□□□□ -1.12
ACTN1-206ENST00000544964 J3QL48 77 aa8.07□□□□□ -1.12
ACTN1-206ENST00000544964 SEC11AP67812 179 aa8.07□□□□□ -1.12
ACTN1-206ENST00000544964 LINC00526Q96FQ7 95 aa8.07□□□□□ -1.12
ACTN1-206ENST00000544964 IGLV4-69A0A075B6H9 119 aa8.06□□□□□ -1.12
ACTN1-206ENST00000544964 A0A087WZ39 114 aa8.06□□□□□ -1.12
ACTN1-206ENST00000544964 HERVK_113P63121 156 aa8.06□□□□□ -1.12
ACTN1-206ENST00000544964 CHAC1Q9BUX1 264 aa8.06□□□□□ -1.12
ACTN1-206ENST00000544964 CDKN2A-AS1Q9UH64 79 aa8.06□□□□□ -1.12
ACTN1-206ENST00000544964 CHTOPQ9Y3Y2 248 aaKnown RBP8.06□□□□□ -1.12
ACTN1-206ENST00000544964 GVQW2A0A096LPI5 108 aaPredicted RBP8.05□□□□□ -1.12
ACTN1-206ENST00000544964 TRAV12-1A0A0B4J245 112 aa8.05□□□□□ -1.12
ACTN1-206ENST00000544964 APOMO95445 188 aa8.05□□□□□ -1.12
ACTN1-206ENST00000544964 IGLC3P0DOY3 106 aa8.05□□□□□ -1.12
ACTN1-206ENST00000544964 ORAOV1Q8WV07 137 aa8.05□□□□□ -1.12
ACTN1-206ENST00000544964 IGHV3-64A0A075B6Q5 118 aa8.04□□□□□ -1.12
ACTN1-206ENST00000544964 IGLV5-45A0A087WSX0 123 aa8.04□□□□□ -1.12
ACTN1-206ENST00000544964 C11orf86A6NJI1 115 aa8.04□□□□□ -1.12
ACTN1-206ENST00000544964 SLPIP03973 132 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms