RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 ATP6V1G2O95670 118 aa2.32□□□□□ -2.04
SNHG1-220ENST00000544550 MBP02144 154 aa2.32□□□□□ -2.04
SNHG1-220ENST00000544550 APCSP02743 223 aa2.32□□□□□ -2.04
SNHG1-220ENST00000544550 TLX1NBP0CAT3 122 aa2.32□□□□□ -2.04
SNHG1-220ENST00000544550 TMEM241Q24JQ0 296 aa2.32□□□□□ -2.04
SNHG1-220ENST00000544550 FAM229BQ4G0N7 80 aa2.32□□□□□ -2.04
SNHG1-220ENST00000544550 LINC00242Q5T6M2 205 aa2.32□□□□□ -2.04
SNHG1-220ENST00000544550 TMUB2Q71RG4 321 aa2.32□□□□□ -2.04
SNHG1-220ENST00000544550 KRTAP11-1Q8IUC1 163 aa2.32□□□□□ -2.04
SNHG1-220ENST00000544550 OR2D3Q8NGH3 330 aa2.32□□□□□ -2.04
SNHG1-220ENST00000544550 TCEAL7Q9BRU2 100 aa2.32□□□□□ -2.04
SNHG1-220ENST00000544550 KRTAP4-1Q9BYQ7 146 aa2.32□□□□□ -2.04
SNHG1-220ENST00000544550 WFDC1Q9HC57 220 aa2.32□□□□□ -2.04
SNHG1-220ENST00000544550 MRPL35Q9NZE8 188 aaKnown RBP2.32□□□□□ -2.04
SNHG1-220ENST00000544550 V9GYH0 126 aa2.32□□□□□ -2.04
SNHG1-220ENST00000544550 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.31□□□□□ -2.04
SNHG1-220ENST00000544550 IGKV2D-26A0A0A0MRZ7 120 aa2.31□□□□□ -2.04
SNHG1-220ENST00000544550 FAM240BA0A1B0GVZ2 78 aa2.31□□□□□ -2.04
SNHG1-220ENST00000544550 FAM168BA1KXE4 195 aa2.31□□□□□ -2.04
SNHG1-220ENST00000544550 IGKV2-29A2NJV5 120 aaPredicted RBP2.31□□□□□ -2.04
SNHG1-220ENST00000544550 C1orf196B1AJZ1 125 aa2.31□□□□□ -2.04
SNHG1-220ENST00000544550 G3V3Q6 166 aa2.31□□□□□ -2.04
SNHG1-220ENST00000544550 M0R2T5 61 aa2.31□□□□□ -2.04
SNHG1-220ENST00000544550 LTAP01374 205 aa2.31□□□□□ -2.04
SNHG1-220ENST00000544550 TRGC1P0CF51 173 aa2.31□□□□□ -2.04
SNHG1-220ENST00000544550 PET100P0DJ07 73 aa2.31□□□□□ -2.04
SNHG1-220ENST00000544550 SPAG11BQ08648 103 aa2.31□□□□□ -2.04
SNHG1-220ENST00000544550 SPAG11AQ6PDA7 123 aa2.31□□□□□ -2.04
SNHG1-220ENST00000544550 OR10D4PQ8NGN7 298 aa2.31□□□□□ -2.04
SNHG1-220ENST00000544550 FAM210AQ96ND0 272 aa2.31□□□□□ -2.04
SNHG1-220ENST00000544550 ACTR3CQ9C0K3 210 aaPredicted RBP2.31□□□□□ -2.04
SNHG1-220ENST00000544550 VCX2Q9H322 139 aa2.31□□□□□ -2.04
SNHG1-220ENST00000544550 HSPB11Q9Y547 144 aa2.31□□□□□ -2.04
SNHG1-220ENST00000544550 MUC21A0A140T8X8 626 aa2.3□□□□□ -2.04
SNHG1-220ENST00000544550 NDUFA1O15239 70 aa2.3□□□□□ -2.04
SNHG1-220ENST00000544550 S100A9P06702 114 aaKnown RBP2.3□□□□□ -2.04
SNHG1-220ENST00000544550 NTF3P20783 257 aa2.3□□□□□ -2.04
SNHG1-220ENST00000544550 BTCP35070 178 aa2.3□□□□□ -2.04
SNHG1-220ENST00000544550 SERF2P84101 59 aa2.3□□□□□ -2.04
SNHG1-220ENST00000544550 SMAGPQ0VAQ4 97 aa2.3□□□□□ -2.04
SNHG1-220ENST00000544550 KRTAP13-3Q3SY46 172 aa2.3□□□□□ -2.04
SNHG1-220ENST00000544550 KRTAP13-2Q52LG2 175 aa2.3□□□□□ -2.04
SNHG1-220ENST00000544550 SEC22CQ9BRL7 303 aa2.3□□□□□ -2.04
SNHG1-220ENST00000544550 SMIM3Q9BZL3 60 aa2.3□□□□□ -2.04
SNHG1-220ENST00000544550 SMDT1Q9H4I9 107 aa2.3□□□□□ -2.04
SNHG1-220ENST00000544550 NDUFA12Q9UI09 145 aa2.3□□□□□ -2.04
SNHG1-220ENST00000544550 F2Z2F3 143 aa2.29□□□□□ -2.04
SNHG1-220ENST00000544550 BCE1O60756 84 aa2.29□□□□□ -2.04
SNHG1-220ENST00000544550 AKR1C3P42330 323 aa2.29□□□□□ -2.04
SNHG1-220ENST00000544550 ERASQ7Z444 233 aa2.29□□□□□ -2.04
SNHG1-220ENST00000544550 MRPL52Q86TS9 123 aaKnown RBP2.29□□□□□ -2.04
SNHG1-220ENST00000544550 DAND5Q8N907 189 aa2.29□□□□□ -2.04
SNHG1-220ENST00000544550 STOML3Q8TAV4 291 aa2.29□□□□□ -2.04
SNHG1-220ENST00000544550 MRAP2Q96G30 205 aa2.29□□□□□ -2.04
SNHG1-220ENST00000544550 KIR2DL4Q99706 377 aa2.29□□□□□ -2.04
SNHG1-220ENST00000544550 PSMG3Q9BT73 122 aaPredicted RBP2.29□□□□□ -2.04
SNHG1-220ENST00000544550 CCDC32Q9BV29 185 aa2.29□□□□□ -2.04
SNHG1-220ENST00000544550 CDC42SE2Q9NRR3 84 aa2.29□□□□□ -2.04
SNHG1-220ENST00000544550 UBE2D4Q9Y2X8 147 aa2.29□□□□□ -2.04
SNHG1-220ENST00000544550 ALG5Q9Y673 324 aa2.29□□□□□ -2.04
SNHG1-220ENST00000544550 XKRY2A2RUG3 117 aa2.28□□□□□ -2.04
SNHG1-220ENST00000544550 FAM74A7A6NL05 159 aa2.28□□□□□ -2.04
SNHG1-220ENST00000544550 NDUFC2-KCTD14E9PQ53 114 aa2.28□□□□□ -2.04
SNHG1-220ENST00000544550 I3L3M4 83 aa2.28□□□□□ -2.04
SNHG1-220ENST00000544550 CTRLP40313 264 aa2.28□□□□□ -2.04
SNHG1-220ENST00000544550 DEFA3P59666 94 aa2.28□□□□□ -2.04
SNHG1-220ENST00000544550 UBE2G2P60604 165 aa2.28□□□□□ -2.04
SNHG1-220ENST00000544550 RPS20P60866 119 aaKnown RBP2.28□□□□□ -2.04
SNHG1-220ENST00000544550 KRTAP19-2Q3LHN2 52 aa2.28□□□□□ -2.04
SNHG1-220ENST00000544550 TEX261Q6UWH6 196 aa2.28□□□□□ -2.04
SNHG1-220ENST00000544550 CYTL1Q9NRR1 136 aa2.28□□□□□ -2.04
SNHG1-220ENST00000544550 NUDT15Q9NV35 164 aa2.28□□□□□ -2.04
SNHG1-220ENST00000544550 ANAPC11Q9NYG5 84 aa2.28□□□□□ -2.04
SNHG1-220ENST00000544550 TNFSF18Q9UNG2 199 aa2.28□□□□□ -2.04
SNHG1-220ENST00000544550 TRBV30A0A0K0K1B3 111 aa2.27□□□□□ -2.05
SNHG1-220ENST00000544550 CTXND1A0A1B0GTU2 59 aa2.27□□□□□ -2.05
SNHG1-220ENST00000544550 C7orf77A4D0Y5 90 aa2.27□□□□□ -2.05
SNHG1-220ENST00000544550 SDHAF1A6NFY7 115 aa2.27□□□□□ -2.05
SNHG1-220ENST00000544550 CCDC160A6NGH7 325 aa2.27□□□□□ -2.05
SNHG1-220ENST00000544550 LYRM1O43325 122 aa2.27□□□□□ -2.05
SNHG1-220ENST00000544550 IGLC6P0CF74 106 aa2.27□□□□□ -2.05
SNHG1-220ENST00000544550 PMCHP20382 165 aa2.27□□□□□ -2.05
SNHG1-220ENST00000544550 ATP6V0CP27449 155 aa2.27□□□□□ -2.05
SNHG1-220ENST00000544550 C5orf38Q86SI9 138 aa2.27□□□□□ -2.05
SNHG1-220ENST00000544550 BAGE2Q86Y30 109 aa2.27□□□□□ -2.05
SNHG1-220ENST00000544550 FAM19A2Q8N3H0 131 aa2.27□□□□□ -2.05
SNHG1-220ENST00000544550 ORAOV1Q8WV07 137 aa2.27□□□□□ -2.05
SNHG1-220ENST00000544550 PPP1R1CQ8WVI7 109 aa2.27□□□□□ -2.05
SNHG1-220ENST00000544550 PACRGQ96M98 296 aaPredicted RBP2.27□□□□□ -2.05
SNHG1-220ENST00000544550 TP73-AS1Q9UF72 201 aa2.27□□□□□ -2.05
SNHG1-220ENST00000544550 C22orf24Q9Y442 160 aa2.27□□□□□ -2.05
SNHG1-220ENST00000544550 CSDC2Q9Y534 153 aaKnown RBP2.27□□□□□ -2.05
SNHG1-220ENST00000544550 TRAV13-1A0A0B4J241 112 aa2.26□□□□□ -2.05
SNHG1-220ENST00000544550 RAB19A4D1S5 217 aa2.26□□□□□ -2.05
SNHG1-220ENST00000544550 SIX6O95475 246 aa2.26□□□□□ -2.05
SNHG1-220ENST00000544550 MPC2O95563 127 aa2.26□□□□□ -2.05
SNHG1-220ENST00000544550 IL7P13232 177 aa2.26□□□□□ -2.05
SNHG1-220ENST00000544550 UBE2AP49459 152 aa2.26□□□□□ -2.05
SNHG1-220ENST00000544550 C9orf129Q5T035 196 aaKnown RBP2.26□□□□□ -2.05
SNHG1-220ENST00000544550 LCE1FQ5T754 118 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms