RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 LINC00322Q6ZN03 302 aaPredicted RBP1.45□□□□□ -2.18
TRAV11-201ENST00000539512 LRRC18Q8N456 261 aa1.45□□□□□ -2.18
TRAV11-201ENST00000539512 MORN4Q8NDC4 146 aa1.45□□□□□ -2.18
TRAV11-201ENST00000539512 OR8J3Q8NGG0 315 aa1.45□□□□□ -2.18
TRAV11-201ENST00000539512 SMIM3Q9BZL3 60 aa1.45□□□□□ -2.18
TRAV11-201ENST00000539512 FKBP11Q9NYL4 201 aa1.45□□□□□ -2.18
TRAV11-201ENST00000539512 TPRKBQ9Y3C4 175 aa1.45□□□□□ -2.18
TRAV11-201ENST00000539512 PKHD1L1Q86WI1 4243 aa1.44□□□□□ -2.18
TRAV11-201ENST00000539512 CCL22O00626 93 aa1.44□□□□□ -2.18
TRAV11-201ENST00000539512 TPT1P13693 172 aaKnown RBP1.44□□□□□ -2.18
TRAV11-201ENST00000539512 SRP9P49458 86 aaKnown RBP1.44□□□□□ -2.18
TRAV11-201ENST00000539512 DSCR4P56555 118 aaPredicted RBP1.44□□□□□ -2.18
TRAV11-201ENST00000539512 CCL8P80075 99 aa1.44□□□□□ -2.18
TRAV11-201ENST00000539512 MRPS36P82909 103 aaKnown RBP1.44□□□□□ -2.18
TRAV11-201ENST00000539512 HIST1H1AQ02539 215 aaPredicted RBP1.44□□□□□ -2.18
TRAV11-201ENST00000539512 HSD17B12Q53GQ0 312 aa1.44□□□□□ -2.18
TRAV11-201ENST00000539512 OR5A2Q8NGI9 324 aa1.44□□□□□ -2.18
TRAV11-201ENST00000539512 OR4C12Q96R67 309 aa1.44□□□□□ -2.18
TRAV11-201ENST00000539512 PFDN5Q99471 154 aa1.44□□□□□ -2.18
TRAV11-201ENST00000539512 TSC22D3Q99576 134 aa1.44□□□□□ -2.18
TRAV11-201ENST00000539512 NABP2Q9BQ15 211 aa1.44□□□□□ -2.18
TRAV11-201ENST00000539512 FAT3Q8TDW7 4589 aa1.44□□□□□ -2.18
TRAV11-201ENST00000539512 LRP1Q07954 4544 aaKnown RBP1.43□□□□□ -2.18
TRAV11-201ENST00000539512 TRAV10A0A0B4J240 114 aa1.43□□□□□ -2.18
TRAV11-201ENST00000539512 NUPR2A6NF83 97 aa1.43□□□□□ -2.18
TRAV11-201ENST00000539512 E7EUB6 86 aa1.43□□□□□ -2.18
TRAV11-201ENST00000539512 TCRAP04437 139 aa1.43□□□□□ -2.18
TRAV11-201ENST00000539512 MPC1LP0DKB6 136 aa1.43□□□□□ -2.18
TRAV11-201ENST00000539512 SNRPFP62306 86 aaKnown RBP1.43□□□□□ -2.18
TRAV11-201ENST00000539512 HAMPP81172 84 aa1.43□□□□□ -2.18
TRAV11-201ENST00000539512 CIRBPQ14011 172 aaKnown RBP1.43□□□□□ -2.18
TRAV11-201ENST00000539512 TEN1Q86WV5 123 aa1.43□□□□□ -2.18
TRAV11-201ENST00000539512 CLEC2BQ92478 149 aa1.43□□□□□ -2.18
TRAV11-201ENST00000539512 BANF2Q9H503 90 aa1.43□□□□□ -2.18
TRAV11-201ENST00000539512 NEBP20929 6669 aa1.43□□□□□ -2.18
TRAV11-201ENST00000539512 MED12LQ86YW9 2145 aa1.42□□□□□ -2.18
TRAV11-201ENST00000539512 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.42□□□□□ -2.18
TRAV11-201ENST00000539512 C9orf170A2RU37 121 aa1.42□□□□□ -2.18
TRAV11-201ENST00000539512 H3BSH0 61 aa1.42□□□□□ -2.18
TRAV11-201ENST00000539512 M0R2Z0 102 aa1.42□□□□□ -2.18
TRAV11-201ENST00000539512 NUPR1O60356 82 aa1.42□□□□□ -2.18
TRAV11-201ENST00000539512 ERC2-IT1O76042 136 aa1.42□□□□□ -2.18
TRAV11-201ENST00000539512 HBDP02042 147 aa1.42□□□□□ -2.18
TRAV11-201ENST00000539512 SLC25A5P05141 298 aaKnown RBP1.42□□□□□ -2.18
TRAV11-201ENST00000539512 SPRNQ5BIV9 151 aa1.42□□□□□ -2.18
TRAV11-201ENST00000539512 ARPINQ7Z6K5 226 aa1.42□□□□□ -2.18
TRAV11-201ENST00000539512 Q8TAT8 98 aa1.42□□□□□ -2.18
TRAV11-201ENST00000539512 VPS13BQ7Z7G8 4022 aa1.42□□□□□ -2.18
TRAV11-201ENST00000539512 TRAV27A0A087WT01 109 aa1.41□□□□□ -2.18
TRAV11-201ENST00000539512 H3BUX3 64 aa1.41□□□□□ -2.18
TRAV11-201ENST00000539512 UQCRQO14949 82 aa1.41□□□□□ -2.18
TRAV11-201ENST00000539512 NDUFA2O43678 99 aa1.41□□□□□ -2.18
TRAV11-201ENST00000539512 IGF2P01344 180 aa1.41□□□□□ -2.18
TRAV11-201ENST00000539512 BLCAPP62952 87 aa1.41□□□□□ -2.18
TRAV11-201ENST00000539512 C10orf99Q6UWK7 81 aa1.41□□□□□ -2.18
TRAV11-201ENST00000539512 OR5AK2Q8NH90 309 aa1.41□□□□□ -2.18
TRAV11-201ENST00000539512 VPS25Q9BRG1 176 aa1.41□□□□□ -2.18
TRAV11-201ENST00000539512 TNFSF18Q9UNG2 199 aa1.41□□□□□ -2.18
TRAV11-201ENST00000539512 A0A087WSZ3 146 aa1.4□□□□□ -2.19
TRAV11-201ENST00000539512 IGLV3-32A0A0A0MS00 114 aa1.4□□□□□ -2.19
TRAV11-201ENST00000539512 LOC107984156A0A0G2JMH3 177 aa1.4□□□□□ -2.19
TRAV11-201ENST00000539512 LOC107986453A0A1B0GWG9 222 aa1.4□□□□□ -2.19
TRAV11-201ENST00000539512 F8W1H4 67 aa1.4□□□□□ -2.19
TRAV11-201ENST00000539512 H3BRM9 83 aa1.4□□□□□ -2.19
TRAV11-201ENST00000539512 SMIM24O75264 130 aa1.4□□□□□ -2.19
TRAV11-201ENST00000539512 TRACP01848 142 aa1.4□□□□□ -2.19
TRAV11-201ENST00000539512 SAA1P0DJI8 122 aaPredicted RBP1.4□□□□□ -2.19
TRAV11-201ENST00000539512 SLC25A4P12235 298 aa1.4□□□□□ -2.19
TRAV11-201ENST00000539512 LSM3P62310 102 aaKnown RBP1.4□□□□□ -2.19
TRAV11-201ENST00000539512 SNRPD3P62318 126 aaKnown RBP1.4□□□□□ -2.19
TRAV11-201ENST00000539512 DIAPH2-AS1Q14236 149 aa1.4□□□□□ -2.19
TRAV11-201ENST00000539512 DEFB136Q30KP8 78 aa1.4□□□□□ -2.19
TRAV11-201ENST00000539512 HAGHLQ6PII5 290 aaPredicted RBP1.4□□□□□ -2.19
TRAV11-201ENST00000539512 ZNF833PQ6ZTB9 187 aa1.4□□□□□ -2.19
TRAV11-201ENST00000539512 ARL17AQ8IVW1 177 aa1.4□□□□□ -2.19
TRAV11-201ENST00000539512 LINC00052Q96N35 136 aa1.4□□□□□ -2.19
TRAV11-201ENST00000539512 SNRNP25Q9BV90 132 aaKnown RBP1.4□□□□□ -2.19
TRAV11-201ENST00000539512 CST11Q9H112 138 aa1.4□□□□□ -2.19
TRAV11-201ENST00000539512 MACF1Q9UPN3 7388 aaKnown RBP1.4□□□□□ -2.19
TRAV11-201ENST00000539512 C3orf85A0A1B0GTC6 90 aa1.39□□□□□ -2.19
TRAV11-201ENST00000539512 ZNF727A8MUV8 499 aa1.39□□□□□ -2.19
TRAV11-201ENST00000539512 J3QR89 54 aa1.39□□□□□ -2.19
TRAV11-201ENST00000539512 K7ERU9 68 aa1.39□□□□□ -2.19
TRAV11-201ENST00000539512 EVI2AP22794 236 aa1.39□□□□□ -2.19
TRAV11-201ENST00000539512 PCBD1P61457 104 aa1.39□□□□□ -2.19
TRAV11-201ENST00000539512 GLYATL3Q5SZD4 288 aa1.39□□□□□ -2.19
TRAV11-201ENST00000539512 MAGOHBQ96A72 148 aaKnown RBP1.39□□□□□ -2.19
TRAV11-201ENST00000539512 TPT1P8Q9HAU6 139 aa1.39□□□□□ -2.19
TRAV11-201ENST00000539512 GPR98Q8WXG9 6306 aa1.38□□□□□ -2.19
TRAV11-201ENST00000539512 IGLC6P0CF74 106 aa1.38□□□□□ -2.19
TRAV11-201ENST00000539512 LINC00694P0DN24 101 aa1.38□□□□□ -2.19
TRAV11-201ENST00000539512 HIST1H1BP16401 226 aaKnown RBP1.38□□□□□ -2.19
TRAV11-201ENST00000539512 AKR1D1P51857 326 aa1.38□□□□□ -2.19
TRAV11-201ENST00000539512 QRFPP83859 136 aa1.38□□□□□ -2.19
TRAV11-201ENST00000539512 GLIPR1L1Q6UWM5 242 aa1.38□□□□□ -2.19
TRAV11-201ENST00000539512 OR5AS1Q8N127 324 aa1.38□□□□□ -2.19
TRAV11-201ENST00000539512 LINC00269Q8N2A0 174 aa1.38□□□□□ -2.19
TRAV11-201ENST00000539512 LPAR5Q9H1C0 372 aa1.38□□□□□ -2.19
TRAV11-201ENST00000539512 COMMD3Q9UBI1 195 aa1.38□□□□□ -2.19
TRAV11-201ENST00000539512 LPAP08519 4548 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms