RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 FAT3Q8TDW7 4589 aa7.32□□□□□ -1.24
RTN3-209ENST00000538995 LRP1Q07954 4544 aaKnown RBP7.32□□□□□ -1.24
RTN3-209ENST00000538995 APOMO95445 188 aa7.32□□□□□ -1.24
RTN3-209ENST00000538995 SYCNQ0VAF6 134 aa7.32□□□□□ -1.24
RTN3-209ENST00000538995 MAJINQ3KP22 176 aa7.32□□□□□ -1.24
RTN3-209ENST00000538995 MAP1LC3AQ9H492 121 aa7.32□□□□□ -1.24
RTN3-209ENST00000538995 PYGO1Q9Y3Y4 419 aa7.32□□□□□ -1.24
RTN3-209ENST00000538995 A0A096LNI7 61 aa7.31□□□□□ -1.24
RTN3-209ENST00000538995 IGKV2-24A0A0C4DH68 120 aa7.31□□□□□ -1.24
RTN3-209ENST00000538995 IFI27P40305 119 aaPredicted RBP7.31□□□□□ -1.24
RTN3-209ENST00000538995 C7orf33Q8WU49 177 aa7.31□□□□□ -1.24
RTN3-209ENST00000538995 FAM104AQ969W3 186 aa7.31□□□□□ -1.24
RTN3-209ENST00000538995 LINC00526Q96FQ7 95 aa7.31□□□□□ -1.24
RTN3-209ENST00000538995 C2orf48Q96LS8 159 aa7.31□□□□□ -1.24
RTN3-209ENST00000538995 IGLV4-69A0A075B6H9 119 aa7.3□□□□□ -1.24
RTN3-209ENST00000538995 TMEM218A2RU14 115 aa7.3□□□□□ -1.24
RTN3-209ENST00000538995 IFITM10A6NMD0 228 aa7.3□□□□□ -1.24
RTN3-209ENST00000538995 K7EMI3 77 aa7.3□□□□□ -1.24
RTN3-209ENST00000538995 ADCYAP1P18509 176 aa7.3□□□□□ -1.24
RTN3-209ENST00000538995 IFITM2Q01629 132 aa7.3□□□□□ -1.24
RTN3-209ENST00000538995 OR10D4PQ8NGN7 298 aa7.3□□□□□ -1.24
RTN3-209ENST00000538995 CTDSP1Q9GZU7 261 aa7.3□□□□□ -1.24
RTN3-209ENST00000538995 TRAV9-1A0A075B6T8 112 aa7.29□□□□□ -1.24
RTN3-209ENST00000538995 IGHV3OR16-9A0A0B4J2B5 98 aa7.29□□□□□ -1.24
RTN3-209ENST00000538995 F8WDY8 70 aa7.29□□□□□ -1.24
RTN3-209ENST00000538995 C5orf38Q86SI9 138 aa7.29□□□□□ -1.24
RTN3-209ENST00000538995 STPG4Q8N801 248 aa7.29□□□□□ -1.24
RTN3-209ENST00000538995 Q8N8P6 123 aa7.29□□□□□ -1.24
RTN3-209ENST00000538995 CAMK2N2Q96S95 79 aa7.29□□□□□ -1.24
RTN3-209ENST00000538995 LOC107984640A0A0U1RRK4 108 aa7.28□□□□□ -1.24
RTN3-209ENST00000538995 NPSP0C0P6 89 aa7.28□□□□□ -1.24
RTN3-209ENST00000538995 HNRNPA3P51991 378 aaKnown RBP7.28□□□□□ -1.24
RTN3-209ENST00000538995 SPAG11BQ08648 103 aa7.28□□□□□ -1.24
RTN3-209ENST00000538995 ORMDL2Q53FV1 153 aa7.28□□□□□ -1.24
RTN3-209ENST00000538995 Q6ZRU5 148 aa7.28□□□□□ -1.24
RTN3-209ENST00000538995 OPRPNQ99935 248 aaPredicted RBP7.28□□□□□ -1.24
RTN3-209ENST00000538995 SEC11CQ9BY50 192 aa7.28□□□□□ -1.24
RTN3-209ENST00000538995 CYSLTR1Q9Y271 337 aa7.28□□□□□ -1.24
RTN3-209ENST00000538995 IGLV4-3A0A075B6K6 122 aa7.27□□□□□ -1.25
RTN3-209ENST00000538995 TGIF2-C20orf24A0A0A6YYL0 155 aa7.27□□□□□ -1.25
RTN3-209ENST00000538995 LOC389332A0A1B0GUA5 103 aa7.27□□□□□ -1.25
RTN3-209ENST00000538995 PTTG1IPP53801 180 aa7.27□□□□□ -1.25
RTN3-209ENST00000538995 RNF151Q2KHN1 245 aa7.27□□□□□ -1.25
RTN3-209ENST00000538995 TMEM141Q96I45 108 aa7.27□□□□□ -1.25
RTN3-209ENST00000538995 NXT2Q9NPJ8 142 aaKnown RBP7.27□□□□□ -1.25
RTN3-209ENST00000538995 C2orf66Q6UXQ4 117 aa7.26□□□□□ -1.25
RTN3-209ENST00000538995 TEX43Q6ZNM6 134 aa7.26□□□□□ -1.25
RTN3-209ENST00000538995 ORAOV1Q8WV07 137 aa7.26□□□□□ -1.25
RTN3-209ENST00000538995 A0A087WZ39 114 aa7.25□□□□□ -1.25
RTN3-209ENST00000538995 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.25□□□□□ -1.25
RTN3-209ENST00000538995 S100PP25815 95 aa7.25□□□□□ -1.25
RTN3-209ENST00000538995 G0S2P27469 103 aa7.25□□□□□ -1.25
RTN3-209ENST00000538995 PRR3P79522 188 aaKnown RBP7.25□□□□□ -1.25
RTN3-209ENST00000538995 Q6ZN92 141 aa7.25□□□□□ -1.25
RTN3-209ENST00000538995 C2orf88Q9BSF0 95 aa7.25□□□□□ -1.25
RTN3-209ENST00000538995 MRPL35Q9NZE8 188 aaKnown RBP7.25□□□□□ -1.25
RTN3-209ENST00000538995 NDUFA1O15239 70 aa7.24□□□□□ -1.25
RTN3-209ENST00000538995 LINC00242Q5T6M2 205 aa7.24□□□□□ -1.25
RTN3-209ENST00000538995 COMMD7Q86VX2 200 aa7.24□□□□□ -1.25
RTN3-209ENST00000538995 LINC01561Q8N1V8 128 aa7.24□□□□□ -1.25
RTN3-209ENST00000538995 UBE2D1P51668 147 aa7.23□□□□□ -1.25
RTN3-209ENST00000538995 GAGE2BQ13066 116 aa7.23□□□□□ -1.25
RTN3-209ENST00000538995 COX19Q49B96 90 aa7.23□□□□□ -1.25
RTN3-209ENST00000538995 PAPPA-AS1Q5QFB9 102 aa7.23□□□□□ -1.25
RTN3-209ENST00000538995 AMELXQ99217 191 aa7.23□□□□□ -1.25
RTN3-209ENST00000538995 GNB1LQ9BYB4 327 aa7.23□□□□□ -1.25
RTN3-209ENST00000538995 LOC105371267A0A1B0GV96 52 aa7.22□□□□□ -1.25
RTN3-209ENST00000538995 IGIPA6NJ69 53 aa7.22□□□□□ -1.25
RTN3-209ENST00000538995 RPL18AQ02543 176 aaKnown RBP7.22□□□□□ -1.25
RTN3-209ENST00000538995 RHEBQ15382 184 aa7.22□□□□□ -1.25
RTN3-209ENST00000538995 C10orf91Q5T1B1 145 aa7.22□□□□□ -1.25
RTN3-209ENST00000538995 LINC00173Q6ZV60 143 aa7.22□□□□□ -1.25
RTN3-209ENST00000538995 FAM19A3Q7Z5A8 133 aa7.22□□□□□ -1.25
RTN3-209ENST00000538995 TIMM17AQ99595 171 aa7.22□□□□□ -1.25
RTN3-209ENST00000538995 VCX2Q9H322 139 aa7.22□□□□□ -1.25
RTN3-209ENST00000538995 CARHSP1Q9Y2V2 147 aaKnown RBP7.22□□□□□ -1.25
RTN3-209ENST00000538995 HMCN2Q8NDA2 5059 aa7.21□□□□□ -1.26
RTN3-209ENST00000538995 LINC01549A6NIU2 74 aa7.21□□□□□ -1.26
RTN3-209ENST00000538995 MT-ND6P03923 174 aa7.21□□□□□ -1.26
RTN3-209ENST00000538995 TLX1NBP0CAT3 122 aa7.21□□□□□ -1.26
RTN3-209ENST00000538995 SERTAD4-AS1Q5TG53 156 aa7.21□□□□□ -1.26
RTN3-209ENST00000538995 SEC11AP67812 179 aa7.2□□□□□ -1.26
RTN3-209ENST00000538995 KIAA0087Q14695 138 aa7.2□□□□□ -1.26
RTN3-209ENST00000538995 KIAA1644Q3SXP7 199 aa7.2□□□□□ -1.26
RTN3-209ENST00000538995 Q6ZRP5 223 aa7.2□□□□□ -1.26
RTN3-209ENST00000538995 TOMM6Q96B49 74 aa7.2□□□□□ -1.26
RTN3-209ENST00000538995 A0A0J9YXV3 536 aa7.19□□□□□ -1.26
RTN3-209ENST00000538995 TRBV30A0A0K0K1B3 111 aa7.19□□□□□ -1.26
RTN3-209ENST00000538995 A0A1W2PNN7 141 aa7.19□□□□□ -1.26
RTN3-209ENST00000538995 LINC01546A6NGU7 62 aa7.19□□□□□ -1.26
RTN3-209ENST00000538995 HERVK_113P63121 156 aa7.19□□□□□ -1.26
RTN3-209ENST00000538995 C9orf116Q5BN46 136 aaPredicted RBP7.19□□□□□ -1.26
RTN3-209ENST00000538995 C10orf25Q5T742 122 aa7.19□□□□□ -1.26
RTN3-209ENST00000538995 UNQ6190/PRO20217Q6UXQ8 127 aa7.19□□□□□ -1.26
RTN3-209ENST00000538995 C6orf48Q9UBA6 75 aa7.19□□□□□ -1.26
RTN3-209ENST00000538995 MT1HL1P0DM35 61 aa7.18□□□□□ -1.26
RTN3-209ENST00000538995 ERASQ7Z444 233 aa7.18□□□□□ -1.26
RTN3-209ENST00000538995 ALKBH7Q9BT30 221 aaPredicted RBP7.18□□□□□ -1.26
RTN3-209ENST00000538995 ZC2HC1BQ5TFG8 222 aa7.17□□□□□ -1.26
RTN3-209ENST00000538995 SPINK6Q6UWN8 80 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms