RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 LINC00469Q8N7U9 141 aa7.26□□□□□ -1.25
TNFRSF1A-211ENST00000538363 CHAC1Q9BUX1 264 aa7.26□□□□□ -1.25
TNFRSF1A-211ENST00000538363 DNAH7Q8WXX0 4024 aa7.25□□□□□ -1.25
TNFRSF1A-211ENST00000538363 IGKV2D-24A0A075B6R9 120 aa7.25□□□□□ -1.25
TNFRSF1A-211ENST00000538363 TRAV8-4A0A0B4J246 113 aa7.25□□□□□ -1.25
TNFRSF1A-211ENST00000538363 K7EP13 123 aa7.25□□□□□ -1.25
TNFRSF1A-211ENST00000538363 MALP21145 153 aa7.25□□□□□ -1.25
TNFRSF1A-211ENST00000538363 MIAQ16674 131 aa7.25□□□□□ -1.25
TNFRSF1A-211ENST00000538363 TTC32Q5I0X7 151 aa7.25□□□□□ -1.25
TNFRSF1A-211ENST00000538363 CDPF1Q6NVV7 123 aa7.25□□□□□ -1.25
TNFRSF1A-211ENST00000538363 C1orf43Q9BWL3 253 aa7.25□□□□□ -1.25
TNFRSF1A-211ENST00000538363 TINCRA0A1B0GVN0 87 aa7.24□□□□□ -1.25
TNFRSF1A-211ENST00000538363 UBE2D1P51668 147 aa7.24□□□□□ -1.25
TNFRSF1A-211ENST00000538363 CHCHD10Q8WYQ3 142 aaPredicted RBP7.24□□□□□ -1.25
TNFRSF1A-211ENST00000538363 VAMP8Q9BV40 100 aa7.24□□□□□ -1.25
TNFRSF1A-211ENST00000538363 GAGE12HA6NDE8 117 aa7.23□□□□□ -1.25
TNFRSF1A-211ENST00000538363 M0R2N4 97 aa7.23□□□□□ -1.25
TNFRSF1A-211ENST00000538363 PSCAO43653 123 aa7.23□□□□□ -1.25
TNFRSF1A-211ENST00000538363 IGLC3P0DOY3 106 aa7.23□□□□□ -1.25
TNFRSF1A-211ENST00000538363 STARD9Q9P2P6 4700 aa7.22□□□□□ -1.25
TNFRSF1A-211ENST00000538363 C11orf86A6NJI1 115 aa7.22□□□□□ -1.25
TNFRSF1A-211ENST00000538363 IBA57-AS1B1ANH7 110 aa7.22□□□□□ -1.25
TNFRSF1A-211ENST00000538363 SMIM6P0DI80 62 aa7.22□□□□□ -1.25
TNFRSF1A-211ENST00000538363 LINC00242Q5T6M2 205 aa7.22□□□□□ -1.25
TNFRSF1A-211ENST00000538363 ENHOQ6UWT2 76 aa7.22□□□□□ -1.25
TNFRSF1A-211ENST00000538363 TM2D2Q9BX73 214 aa7.22□□□□□ -1.25
TNFRSF1A-211ENST00000538363 COX11Q9Y6N1 276 aa7.22□□□□□ -1.25
TNFRSF1A-211ENST00000538363 IGHV3-64A0A075B6Q5 118 aa7.21□□□□□ -1.26
TNFRSF1A-211ENST00000538363 NBDYA0A0U1RRE5 68 aa7.21□□□□□ -1.26
TNFRSF1A-211ENST00000538363 hDV102S1A0JD36 115 aa7.21□□□□□ -1.26
TNFRSF1A-211ENST00000538363 COX7A2LO14548 114 aa7.21□□□□□ -1.26
TNFRSF1A-211ENST00000538363 APOMO95445 188 aa7.21□□□□□ -1.26
TNFRSF1A-211ENST00000538363 PRSS2P07478 247 aa7.21□□□□□ -1.26
TNFRSF1A-211ENST00000538363 PYY3Q5JQD4 70 aa7.21□□□□□ -1.26
TNFRSF1A-211ENST00000538363 CD164L2Q6UWJ8 174 aa7.21□□□□□ -1.26
TNFRSF1A-211ENST00000538363 C5orf38Q86SI9 138 aa7.21□□□□□ -1.26
TNFRSF1A-211ENST00000538363 NFE4Q86UQ8 179 aa7.21□□□□□ -1.26
TNFRSF1A-211ENST00000538363 PRR34Q9NV39 138 aa7.21□□□□□ -1.26
TNFRSF1A-211ENST00000538363 IGLV4-69A0A075B6H9 119 aa7.2□□□□□ -1.26
TNFRSF1A-211ENST00000538363 SPINK8P0C7L1 97 aa7.2□□□□□ -1.26
TNFRSF1A-211ENST00000538363 ZNF22P17026 224 aaPredicted RBP7.2□□□□□ -1.26
TNFRSF1A-211ENST00000538363 COX6A2Q02221 97 aa7.2□□□□□ -1.26
TNFRSF1A-211ENST00000538363 STPG4Q8N801 248 aa7.2□□□□□ -1.26
TNFRSF1A-211ENST00000538363 FAM104AQ969W3 186 aa7.2□□□□□ -1.26
TNFRSF1A-211ENST00000538363 TOMM7Q9P0U1 55 aa7.2□□□□□ -1.26
TNFRSF1A-211ENST00000538363 CDKN2A-AS1Q9UH64 79 aa7.2□□□□□ -1.26
TNFRSF1A-211ENST00000538363 PAM16Q9Y3D7 125 aa7.2□□□□□ -1.26
TNFRSF1A-211ENST00000538363 CSMD3Q7Z407 3707 aa7.19□□□□□ -1.26
TNFRSF1A-211ENST00000538363 LGALS3P17931 250 aaKnown RBP7.19□□□□□ -1.26
TNFRSF1A-211ENST00000538363 NMUP48645 174 aa7.19□□□□□ -1.26
TNFRSF1A-211ENST00000538363 SPATA45Q537H7 98 aa7.19□□□□□ -1.26
TNFRSF1A-211ENST00000538363 CFAP161Q6P656 301 aa7.19□□□□□ -1.26
TNFRSF1A-211ENST00000538363 C12orf57Q99622 126 aa7.19□□□□□ -1.26
TNFRSF1A-211ENST00000538363 FAM19A3Q7Z5A8 133 aa7.18□□□□□ -1.26
TNFRSF1A-211ENST00000538363 LINC00476Q8WZB0 136 aa7.18□□□□□ -1.26
TNFRSF1A-211ENST00000538363 PLEKHB2Q96CS7 222 aa7.18□□□□□ -1.26
TNFRSF1A-211ENST00000538363 TMEM223A0PJW6 202 aa7.17□□□□□ -1.26
TNFRSF1A-211ENST00000538363 C6orf226Q5I0X4 101 aa7.17□□□□□ -1.26
TNFRSF1A-211ENST00000538363 A0A087WZ39 114 aa7.16□□□□□ -1.26
TNFRSF1A-211ENST00000538363 ZNF561-AS1K7EIQ3 104 aa7.16□□□□□ -1.26
TNFRSF1A-211ENST00000538363 LEPROTO15243 131 aa7.16□□□□□ -1.26
TNFRSF1A-211ENST00000538363 CKS1BP61024 79 aa7.16□□□□□ -1.26
TNFRSF1A-211ENST00000538363 MAJINQ3KP22 176 aa7.16□□□□□ -1.26
TNFRSF1A-211ENST00000538363 ORAOV1Q8WV07 137 aa7.16□□□□□ -1.26
TNFRSF1A-211ENST00000538363 IGHV3OR16-9A0A0B4J2B5 98 aa7.15□□□□□ -1.26
TNFRSF1A-211ENST00000538363 IGHV1-58A0A0C4DH39 117 aa7.15□□□□□ -1.26
TNFRSF1A-211ENST00000538363 FOXI1Q12951 378 aa7.15□□□□□ -1.26
TNFRSF1A-211ENST00000538363 COX7B2Q8TF08 81 aa7.15□□□□□ -1.26
TNFRSF1A-211ENST00000538363 IGLV5-45A0A087WSX0 123 aa7.14□□□□□ -1.27
TNFRSF1A-211ENST00000538363 E9PLD3 99 aa7.14□□□□□ -1.27
TNFRSF1A-211ENST00000538363 J3QQQ9 107 aa7.14□□□□□ -1.27
TNFRSF1A-211ENST00000538363 ANKRD39Q53RE8 183 aa7.14□□□□□ -1.27
TNFRSF1A-211ENST00000538363 C1orf134Q5TEV5 83 aa7.14□□□□□ -1.27
TNFRSF1A-211ENST00000538363 LINC00518Q8N0U6 118 aa7.14□□□□□ -1.27
TNFRSF1A-211ENST00000538363 LINC01561Q8N1V8 128 aa7.14□□□□□ -1.27
TNFRSF1A-211ENST00000538363 C6orf223Q8N319 242 aa7.14□□□□□ -1.27
TNFRSF1A-211ENST00000538363 DYNC2H1Q8NCM8 4307 aaKnown RBP7.14□□□□□ -1.27
TNFRSF1A-211ENST00000538363 TENM2Q9NT68 2774 aa7.14□□□□□ -1.27
TNFRSF1A-211ENST00000538363 MYMXA0A1B0GTQ4 84 aa7.13□□□□□ -1.27
TNFRSF1A-211ENST00000538363 SMIM1B2RUZ4 78 aa7.13□□□□□ -1.27
TNFRSF1A-211ENST00000538363 TSTD3H0UI37 97 aa7.13□□□□□ -1.27
TNFRSF1A-211ENST00000538363 SPAG11BQ08648 103 aa7.13□□□□□ -1.27
TNFRSF1A-211ENST00000538363 SCGB1D4Q6XE38 83 aa7.13□□□□□ -1.27
TNFRSF1A-211ENST00000538363 C14orf144Q96I85 54 aa7.13□□□□□ -1.27
TNFRSF1A-211ENST00000538363 PRO1933Q9H354 126 aa7.13□□□□□ -1.27
TNFRSF1A-211ENST00000538363 ALMS1Q8TCU4 4167 aa7.12□□□□□ -1.27
TNFRSF1A-211ENST00000538363 ZNF815PA8K554 130 aa7.12□□□□□ -1.27
TNFRSF1A-211ENST00000538363 HIGD2BQ4VC39 106 aa7.12□□□□□ -1.27
TNFRSF1A-211ENST00000538363 C14orf177Q52M58 125 aa7.12□□□□□ -1.27
TNFRSF1A-211ENST00000538363 SLC25A34Q6PIV7 304 aa7.12□□□□□ -1.27
TNFRSF1A-211ENST00000538363 PLECQ15149 4684 aaKnown RBP7.12□□□□□ -1.27
TNFRSF1A-211ENST00000538363 LECT2O14960 151 aa7.11□□□□□ -1.27
TNFRSF1A-211ENST00000538363 CIRBPQ14011 172 aaKnown RBP7.11□□□□□ -1.27
TNFRSF1A-211ENST00000538363 MEIG1Q5JSS6 88 aa7.11□□□□□ -1.27
TNFRSF1A-211ENST00000538363 KRTAP1-5Q9BYS1 174 aa7.11□□□□□ -1.27
TNFRSF1A-211ENST00000538363 NDUFA12Q9UI09 145 aa7.11□□□□□ -1.27
TNFRSF1A-211ENST00000538363 KMT2CQ8NEZ4 4911 aaKnown RBP7.1□□□□□ -1.27
TNFRSF1A-211ENST00000538363 USP17L23D6RBM5 183 aa7.1□□□□□ -1.27
TNFRSF1A-211ENST00000538363 CXCL5P42830 114 aa7.1□□□□□ -1.27
TNFRSF1A-211ENST00000538363 SFTA2Q6UW10 78 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms