RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 MRAP2Q96G30 205 aa3.25□□□□□ -1.89
SNHG1-207ENST00000537965 CNFNQ9BYD5 112 aa3.25□□□□□ -1.89
SNHG1-207ENST00000537965 CYTL1Q9NRR1 136 aa3.25□□□□□ -1.89
SNHG1-207ENST00000537965 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.24□□□□□ -1.89
SNHG1-207ENST00000537965 A0A1B0GV50 99 aa3.24□□□□□ -1.89
SNHG1-207ENST00000537965 KANTRA0A1W2PQU2 76 aa3.24□□□□□ -1.89
SNHG1-207ENST00000537965 IGKV2-29A2NJV5 120 aaPredicted RBP3.24□□□□□ -1.89
SNHG1-207ENST00000537965 SDHAF1A6NFY7 115 aa3.24□□□□□ -1.89
SNHG1-207ENST00000537965 COX7A2LO14548 114 aa3.24□□□□□ -1.89
SNHG1-207ENST00000537965 CTRLP40313 264 aa3.24□□□□□ -1.89
SNHG1-207ENST00000537965 RPL13AP40429 203 aaKnown RBP3.24□□□□□ -1.89
SNHG1-207ENST00000537965 C1orf137Q5JT78 98 aa3.24□□□□□ -1.89
SNHG1-207ENST00000537965 MRPL52Q86TS9 123 aaKnown RBP3.24□□□□□ -1.89
SNHG1-207ENST00000537965 C2orf48Q96LS8 159 aa3.24□□□□□ -1.89
SNHG1-207ENST00000537965 CAMK2N2Q96S95 79 aa3.24□□□□□ -1.89
SNHG1-207ENST00000537965 IMMP2LQ96T52 175 aa3.24□□□□□ -1.89
SNHG1-207ENST00000537965 GNG13Q9P2W3 67 aa3.24□□□□□ -1.89
SNHG1-207ENST00000537965 TRBV6-5A0A0K0K1A5 114 aa3.23□□□□□ -1.89
SNHG1-207ENST00000537965 IGLV7-43P04211 117 aa3.23□□□□□ -1.89
SNHG1-207ENST00000537965 CFC1BP0CG36 223 aa3.23□□□□□ -1.89
SNHG1-207ENST00000537965 CFC1P0CG37 223 aa3.23□□□□□ -1.89
SNHG1-207ENST00000537965 ESDP10768 282 aa3.23□□□□□ -1.89
SNHG1-207ENST00000537965 TAGLN2P37802 199 aaKnown RBP3.23□□□□□ -1.89
SNHG1-207ENST00000537965 UBE2D1P51668 147 aa3.23□□□□□ -1.89
SNHG1-207ENST00000537965 C9orf116Q5BN46 136 aaPredicted RBP3.23□□□□□ -1.89
SNHG1-207ENST00000537965 NUP35Q8NFH5 326 aa3.23□□□□□ -1.89
SNHG1-207ENST00000537965 BORCS7Q96B45 105 aa3.23□□□□□ -1.89
SNHG1-207ENST00000537965 LINC00526Q96FQ7 95 aa3.23□□□□□ -1.89
SNHG1-207ENST00000537965 ST20Q9HBF5 79 aa3.23□□□□□ -1.89
SNHG1-207ENST00000537965 CDC42SE2Q9NRR3 84 aa3.23□□□□□ -1.89
SNHG1-207ENST00000537965 MED9Q9NWA0 146 aa3.23□□□□□ -1.89
SNHG1-207ENST00000537965 CSDC2Q9Y534 153 aaKnown RBP3.23□□□□□ -1.89
SNHG1-207ENST00000537965 A0A087WZ39 114 aa3.22□□□□□ -1.89
SNHG1-207ENST00000537965 A0A1W2PNN7 141 aa3.22□□□□□ -1.89
SNHG1-207ENST00000537965 C7orf77A4D0Y5 90 aa3.22□□□□□ -1.89
SNHG1-207ENST00000537965 RAB19A4D1S5 217 aa3.22□□□□□ -1.89
SNHG1-207ENST00000537965 HMSDA8MTL9 139 aa3.22□□□□□ -1.89
SNHG1-207ENST00000537965 A8MWL6 223 aa3.22□□□□□ -1.89
SNHG1-207ENST00000537965 G3V3Q6 166 aa3.22□□□□□ -1.89
SNHG1-207ENST00000537965 H0Y9J4 135 aa3.22□□□□□ -1.89
SNHG1-207ENST00000537965 PPP1R17O96001 155 aa3.22□□□□□ -1.89
SNHG1-207ENST00000537965 BCL2P10415 239 aa3.22□□□□□ -1.89
SNHG1-207ENST00000537965 MEF2BQ02080 365 aaPredicted RBP3.22□□□□□ -1.89
SNHG1-207ENST00000537965 RPL18AQ02543 176 aaKnown RBP3.22□□□□□ -1.89
SNHG1-207ENST00000537965 PRR4Q16378 134 aa3.22□□□□□ -1.89
SNHG1-207ENST00000537965 TMEM241Q24JQ0 296 aa3.22□□□□□ -1.89
SNHG1-207ENST00000537965 RPL39LQ96EH5 51 aaKnown RBP3.22□□□□□ -1.89
SNHG1-207ENST00000537965 RPP21Q9H633 154 aaKnown RBP3.22□□□□□ -1.89
SNHG1-207ENST00000537965 TRBV27A0A0K0K1C4 114 aa3.21□□□□□ -1.9
SNHG1-207ENST00000537965 TCAPO15273 167 aa3.21□□□□□ -1.9
SNHG1-207ENST00000537965 BCL2L11O43521 198 aa3.21□□□□□ -1.9
SNHG1-207ENST00000537965 FCER1GP30273 86 aa3.21□□□□□ -1.9
SNHG1-207ENST00000537965 RPL24P83731 157 aaKnown RBP3.21□□□□□ -1.9
SNHG1-207ENST00000537965 PHF5AQ7RTV0 110 aaKnown RBP3.21□□□□□ -1.9
SNHG1-207ENST00000537965 OR10D4PQ8NGN7 298 aa3.21□□□□□ -1.9
SNHG1-207ENST00000537965 KIR2DL4Q99706 377 aa3.21□□□□□ -1.9
SNHG1-207ENST00000537965 MRPL35Q9NZE8 188 aaKnown RBP3.21□□□□□ -1.9
SNHG1-207ENST00000537965 CARHSP1Q9Y2V2 147 aaKnown RBP3.21□□□□□ -1.9
SNHG1-207ENST00000537965 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.2□□□□□ -1.9
SNHG1-207ENST00000537965 NDUFA1O15239 70 aa3.2□□□□□ -1.9
SNHG1-207ENST00000537965 GATCO43716 136 aaKnown RBP3.2□□□□□ -1.9
SNHG1-207ENST00000537965 TSHBP01222 138 aa3.2□□□□□ -1.9
SNHG1-207ENST00000537965 TLX1NBP0CAT3 122 aa3.2□□□□□ -1.9
SNHG1-207ENST00000537965 POLR2KP53803 58 aaKnown RBP3.2□□□□□ -1.9
SNHG1-207ENST00000537965 LINC01547P58512 204 aaPredicted RBP3.2□□□□□ -1.9
SNHG1-207ENST00000537965 BATF3Q9NR55 127 aa3.2□□□□□ -1.9
SNHG1-207ENST00000537965 TMEM242Q9NWH2 141 aa3.2□□□□□ -1.9
SNHG1-207ENST00000537965 TRBV20OR9-2A0A075B6H5 130 aa3.19□□□□□ -1.9
SNHG1-207ENST00000537965 TRAV13-1A0A0B4J241 112 aa3.19□□□□□ -1.9
SNHG1-207ENST00000537965 A0A1B0GUT8 65 aa3.19□□□□□ -1.9
SNHG1-207ENST00000537965 PPP1R2P9O14990 202 aa3.19□□□□□ -1.9
SNHG1-207ENST00000537965 FOXA3P55318 350 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-207ENST00000537965 UBE2BP63146 152 aa3.19□□□□□ -1.9
SNHG1-207ENST00000537965 SPAG11BQ08648 103 aa3.19□□□□□ -1.9
SNHG1-207ENST00000537965 C5orf38Q86SI9 138 aa3.19□□□□□ -1.9
SNHG1-207ENST00000537965 OPRPNQ99935 248 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-207ENST00000537965 TIMM21Q9BVV7 248 aa3.19□□□□□ -1.9
SNHG1-207ENST00000537965 TMEM191AQ9H0A3 160 aa3.19□□□□□ -1.9
SNHG1-207ENST00000537965 RNASE7Q9H1E1 156 aaKnown RBP3.19□□□□□ -1.9
SNHG1-207ENST00000537965 RGS21Q2M5E4 152 aa3.18□□□□□ -1.9
SNHG1-207ENST00000537965 FAM231DQ6ZW35 169 aa3.18□□□□□ -1.9
SNHG1-207ENST00000537965 ORAOV1Q8WV07 137 aa3.18□□□□□ -1.9
SNHG1-207ENST00000537965 UBE2D4Q9Y2X8 147 aa3.18□□□□□ -1.9
SNHG1-207ENST00000537965 IGLV5-45A0A087WSX0 123 aa3.17□□□□□ -1.9
SNHG1-207ENST00000537965 TGIF2-C20orf24A0A0A6YYL0 155 aa3.17□□□□□ -1.9
SNHG1-207ENST00000537965 LINC00862A6NCI5 91 aa3.17□□□□□ -1.9
SNHG1-207ENST00000537965 HIGD1CA8MV81 97 aa3.17□□□□□ -1.9
SNHG1-207ENST00000537965 TMEM250H0YL14 139 aa3.17□□□□□ -1.9
SNHG1-207ENST00000537965 SMLR1H3BR10 107 aa3.17□□□□□ -1.9
SNHG1-207ENST00000537965 K7EN84 100 aa3.17□□□□□ -1.9
SNHG1-207ENST00000537965 M0QXV9 152 aa3.17□□□□□ -1.9
SNHG1-207ENST00000537965 NUPR1O60356 82 aa3.17□□□□□ -1.9
SNHG1-207ENST00000537965 KRTAP1-4P0C5Y4 121 aa3.17□□□□□ -1.9
SNHG1-207ENST00000537965 RAB4AP20338 218 aa3.17□□□□□ -1.9
SNHG1-207ENST00000537965 RIGQ13278 110 aa3.17□□□□□ -1.9
SNHG1-207ENST00000537965 FAM19A5Q7Z5A7 132 aaPredicted RBP3.17□□□□□ -1.9
SNHG1-207ENST00000537965 PACRGQ96M98 296 aaPredicted RBP3.17□□□□□ -1.9
SNHG1-207ENST00000537965 IGHV3OR16-9A0A0B4J2B5 98 aa3.16□□□□□ -1.9
SNHG1-207ENST00000537965 TRBV30A0A0K0K1B3 111 aa3.16□□□□□ -1.9
SNHG1-207ENST00000537965 NDUFC2-KCTD14E9PQ53 114 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms