RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 FAM25AB3EWG3 89 aa1.96□□□□□ -2.1
YBX3-205ENST00000536107 FAM25CB3EWG5 89 aa1.96□□□□□ -2.1
YBX3-205ENST00000536107 FAM25GB3EWG6 89 aa1.96□□□□□ -2.1
YBX3-205ENST00000536107 G3V3Q6 166 aa1.96□□□□□ -2.1
YBX3-205ENST00000536107 CST7O76096 145 aa1.96□□□□□ -2.1
YBX3-205ENST00000536107 IGLV6-57P01721 117 aa1.96□□□□□ -2.1
YBX3-205ENST00000536107 SPRR2DP22532 72 aa1.96□□□□□ -2.1
YBX3-205ENST00000536107 TGFBR1P36897 503 aa1.96□□□□□ -2.1
YBX3-205ENST00000536107 PRLHP81277 87 aa1.96□□□□□ -2.1
YBX3-205ENST00000536107 FLI1Q01543 452 aaPredicted RBP1.96□□□□□ -2.1
YBX3-205ENST00000536107 C9orf129Q5T035 196 aaKnown RBP1.96□□□□□ -2.1
YBX3-205ENST00000536107 LINC00469Q8N7U9 141 aa1.96□□□□□ -2.1
YBX3-205ENST00000536107 C20orf166-AS1Q96NR2 134 aa1.96□□□□□ -2.1
YBX3-205ENST00000536107 GSKIPQ9P0R6 139 aa1.96□□□□□ -2.1
YBX3-205ENST00000536107 C6orf48Q9UBA6 75 aa1.96□□□□□ -2.1
YBX3-205ENST00000536107 MTFP1Q9UDX5 166 aa1.96□□□□□ -2.1
YBX3-205ENST00000536107 SCP2D1Q9UJQ7 156 aa1.96□□□□□ -2.1
YBX3-205ENST00000536107 FAM236DA0A1B0GTK5 79 aa1.95□□□□□ -2.1
YBX3-205ENST00000536107 SPRR5A0A1B0GTR4 108 aa1.95□□□□□ -2.1
YBX3-205ENST00000536107 C1orf196B1AJZ1 125 aa1.95□□□□□ -2.1
YBX3-205ENST00000536107 NDUFC2-KCTD14E9PQ53 114 aa1.95□□□□□ -2.1
YBX3-205ENST00000536107 M0QY20 66 aa1.95□□□□□ -2.1
YBX3-205ENST00000536107 SH2D1AO60880 128 aa1.95□□□□□ -2.1
YBX3-205ENST00000536107 APOA1P02647 267 aa1.95□□□□□ -2.1
YBX3-205ENST00000536107 APCSP02743 223 aa1.95□□□□□ -2.1
YBX3-205ENST00000536107 OR5AL1P0C617 328 aa1.95□□□□□ -2.1
YBX3-205ENST00000536107 AKAIN1P0CW23 69 aa1.95□□□□□ -2.1
YBX3-205ENST00000536107 FAM236CP0DP71 79 aa1.95□□□□□ -2.1
YBX3-205ENST00000536107 ZNF25P17030 456 aaPredicted RBP1.95□□□□□ -2.1
YBX3-205ENST00000536107 FHITP49789 147 aa1.95□□□□□ -2.1
YBX3-205ENST00000536107 TAS2R45P59539 299 aa1.95□□□□□ -2.1
YBX3-205ENST00000536107 RPL37P61927 97 aaKnown RBP1.95□□□□□ -2.1
YBX3-205ENST00000536107 IL18Q14116 193 aa1.95□□□□□ -2.1
YBX3-205ENST00000536107 KHDC3LQ587J8 217 aa1.95□□□□□ -2.1
YBX3-205ENST00000536107 FAM19A1Q7Z5A9 133 aa1.95□□□□□ -2.1
YBX3-205ENST00000536107 CBLN2Q8IUK8 224 aa1.95□□□□□ -2.1
YBX3-205ENST00000536107 PACRGLQ8N7B6 248 aa1.95□□□□□ -2.1
YBX3-205ENST00000536107 OR10D4PQ8NGN7 298 aa1.95□□□□□ -2.1
YBX3-205ENST00000536107 OR10AG1Q8NH19 301 aa1.95□□□□□ -2.1
YBX3-205ENST00000536107 AP3S1Q92572 193 aa1.95□□□□□ -2.1
YBX3-205ENST00000536107 PLEKHB2Q96CS7 222 aa1.95□□□□□ -2.1
YBX3-205ENST00000536107 LINC00167Q96N53 147 aa1.95□□□□□ -2.1
YBX3-205ENST00000536107 SPRR2FQ96RM1 72 aa1.95□□□□□ -2.1
YBX3-205ENST00000536107 CCDC32Q9BV29 185 aa1.95□□□□□ -2.1
YBX3-205ENST00000536107 MCUBQ9NWR8 336 aa1.95□□□□□ -2.1
YBX3-205ENST00000536107 TRBV20-1A0A075B6N2 111 aa1.94□□□□□ -2.1
YBX3-205ENST00000536107 TRAV13-1A0A0B4J241 112 aa1.94□□□□□ -2.1
YBX3-205ENST00000536107 TAS2R30P59541 319 aa1.94□□□□□ -2.1
YBX3-205ENST00000536107 UBE2G2P60604 165 aa1.94□□□□□ -2.1
YBX3-205ENST00000536107 NCS1P62166 190 aa1.94□□□□□ -2.1
YBX3-205ENST00000536107 RPS29P62273 56 aaKnown RBP1.94□□□□□ -2.1
YBX3-205ENST00000536107 DNLZQ5SXM8 178 aa1.94□□□□□ -2.1
YBX3-205ENST00000536107 RASL11AQ6T310 242 aa1.94□□□□□ -2.1
YBX3-205ENST00000536107 KRTAP13-1Q8IUC0 172 aa1.94□□□□□ -2.1
YBX3-205ENST00000536107 C15orf40Q8WUR7 153 aa1.94□□□□□ -2.1
YBX3-205ENST00000536107 AP1S3Q96PC3 154 aa1.94□□□□□ -2.1
YBX3-205ENST00000536107 HIGD2AQ9BW72 106 aa1.94□□□□□ -2.1
YBX3-205ENST00000536107 MRPS26Q9BYN8 205 aaKnown RBP1.94□□□□□ -2.1
YBX3-205ENST00000536107 XAGE1AQ9HD64 81 aa1.94□□□□□ -2.1
YBX3-205ENST00000536107 CYTL1Q9NRR1 136 aa1.94□□□□□ -2.1
YBX3-205ENST00000536107 RSL24D1Q9UHA3 163 aaKnown RBP1.94□□□□□ -2.1
YBX3-205ENST00000536107 IGLV9-49A0A0B4J1Y8 123 aa1.93□□□□□ -2.1
YBX3-205ENST00000536107 C7orf66A4D0T2 115 aa1.93□□□□□ -2.1
YBX3-205ENST00000536107 HPGDSO60760 199 aa1.93□□□□□ -2.1
YBX3-205ENST00000536107 S100A9P06702 114 aaKnown RBP1.93□□□□□ -2.1
YBX3-205ENST00000536107 STAG3L3P0CL85 134 aa1.93□□□□□ -2.1
YBX3-205ENST00000536107 S100A11P31949 105 aa1.93□□□□□ -2.1
YBX3-205ENST00000536107 SEC61GP60059 68 aa1.93□□□□□ -2.1
YBX3-205ENST00000536107 RPL32P62910 135 aaKnown RBP1.93□□□□□ -2.1
YBX3-205ENST00000536107 TMEM128Q5BJH2 165 aa1.93□□□□□ -2.1
YBX3-205ENST00000536107 Q6ZVQ6 151 aa1.93□□□□□ -2.1
YBX3-205ENST00000536107 C5orf17Q8NAS9 161 aa1.93□□□□□ -2.1
YBX3-205ENST00000536107 NPCDR1Q9BY65 106 aa1.93□□□□□ -2.1
YBX3-205ENST00000536107 GNB1LQ9BYB4 327 aa1.93□□□□□ -2.1
YBX3-205ENST00000536107 NIT2Q9NQR4 276 aa1.93□□□□□ -2.1
YBX3-205ENST00000536107 ZNF706Q9Y5V0 76 aaPredicted RBP1.93□□□□□ -2.1
YBX3-205ENST00000536107 ARL2-SNX15V9GYD0 113 aa1.93□□□□□ -2.1
YBX3-205ENST00000536107 HMCN1Q96RW7 5635 aa1.93□□□□□ -2.1
YBX3-205ENST00000536107 DSTQ03001 7570 aaKnown RBP1.92□□□□□ -2.1
YBX3-205ENST00000536107 IGKV2-28A0A075B6P5 120 aa1.92□□□□□ -2.1
YBX3-205ENST00000536107 FXYD6-FXYD2A0A087WZ82 144 aa1.92□□□□□ -2.1
YBX3-205ENST00000536107 ZNF727A8MUV8 499 aa1.92□□□□□ -2.1
YBX3-205ENST00000536107 ATP5HO75947 161 aa1.92□□□□□ -2.1
YBX3-205ENST00000536107 SFT2D2O95562 160 aa1.92□□□□□ -2.1
YBX3-205ENST00000536107 IGKV2D-28P01615 120 aa1.92□□□□□ -2.1
YBX3-205ENST00000536107 CRIP1P50238 77 aa1.92□□□□□ -2.1
YBX3-205ENST00000536107 HBG1P69891 147 aa1.92□□□□□ -2.1
YBX3-205ENST00000536107 HBG2P69892 147 aa1.92□□□□□ -2.1
YBX3-205ENST00000536107 MOBPQ13875 183 aa1.92□□□□□ -2.1
YBX3-205ENST00000536107 C6orf226Q5I0X4 101 aa1.92□□□□□ -2.1
YBX3-205ENST00000536107 LINC01551Q86U37 167 aa1.92□□□□□ -2.1
YBX3-205ENST00000536107 STX12Q86Y82 276 aa1.92□□□□□ -2.1
YBX3-205ENST00000536107 LINC00518Q8N0U6 118 aa1.92□□□□□ -2.1
YBX3-205ENST00000536107 MCFD2Q8NI22 146 aa1.92□□□□□ -2.1
YBX3-205ENST00000536107 SPRR4Q96PI1 79 aa1.92□□□□□ -2.1
YBX3-205ENST00000536107 TIMM17AQ99595 171 aa1.92□□□□□ -2.1
YBX3-205ENST00000536107 VCXQ9H320 206 aa1.92□□□□□ -2.1
YBX3-205ENST00000536107 CDC42SE2Q9NRR3 84 aa1.92□□□□□ -2.1
YBX3-205ENST00000536107 KCNIP2Q9NS61 270 aa1.92□□□□□ -2.1
YBX3-205ENST00000536107 EPDR1Q9UM22 224 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms