RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 NRACQ8N912 160 aa7.87□□□□□ -1.15
TNFRSF1A-207ENST00000535958 GAGE2DQ9UEU5 116 aa7.87□□□□□ -1.15
TNFRSF1A-207ENST00000535958 TGIF2-C20orf24A0A0A6YYL0 155 aa7.86□□□□□ -1.15
TNFRSF1A-207ENST00000535958 FAM168BA1KXE4 195 aa7.86□□□□□ -1.15
TNFRSF1A-207ENST00000535958 M0QXV9 152 aa7.86□□□□□ -1.15
TNFRSF1A-207ENST00000535958 HBBP68871 147 aa7.86□□□□□ -1.15
TNFRSF1A-207ENST00000535958 ALKAL2Q6UX46 152 aa7.86□□□□□ -1.15
TNFRSF1A-207ENST00000535958 NAT8BQ9UHF3 227 aa7.86□□□□□ -1.15
TNFRSF1A-207ENST00000535958 CKS2P33552 79 aa7.85□□□□□ -1.15
TNFRSF1A-207ENST00000535958 C20orf78Q9BR46 151 aa7.85□□□□□ -1.15
TNFRSF1A-207ENST00000535958 SPANXA1Q9NS26 97 aa7.85□□□□□ -1.15
TNFRSF1A-207ENST00000535958 LINC00862A6NCI5 91 aa7.84□□□□□ -1.15
TNFRSF1A-207ENST00000535958 TLX1NBP0CAT3 122 aa7.84□□□□□ -1.15
TNFRSF1A-207ENST00000535958 RPL39P62891 51 aaKnown RBP7.84□□□□□ -1.15
TNFRSF1A-207ENST00000535958 MRPL51Q4U2R6 128 aaKnown RBP7.84□□□□□ -1.15
TNFRSF1A-207ENST00000535958 SMDT1Q9H4I9 107 aa7.84□□□□□ -1.15
TNFRSF1A-207ENST00000535958 FAM104BQ5XKR9 115 aa7.83□□□□□ -1.16
TNFRSF1A-207ENST00000535958 UNQ6190/PRO20217Q6UXQ8 127 aa7.83□□□□□ -1.16
TNFRSF1A-207ENST00000535958 PACRGQ96M98 296 aaPredicted RBP7.83□□□□□ -1.16
TNFRSF1A-207ENST00000535958 C6orf48Q9UBA6 75 aa7.83□□□□□ -1.16
TNFRSF1A-207ENST00000535958 V9GYV3 84 aa7.83□□□□□ -1.16
TNFRSF1A-207ENST00000535958 IGHV3OR16-9A0A0B4J2B5 98 aa7.82□□□□□ -1.16
TNFRSF1A-207ENST00000535958 IFI27P40305 119 aaPredicted RBP7.82□□□□□ -1.16
TNFRSF1A-207ENST00000535958 C10orf25Q5T742 122 aa7.82□□□□□ -1.16
TNFRSF1A-207ENST00000535958 SMIM2Q9BVW6 85 aa7.82□□□□□ -1.16
TNFRSF1A-207ENST00000535958 TRBV30A0A0K0K1B3 111 aa7.81□□□□□ -1.16
TNFRSF1A-207ENST00000535958 A0A1B0GW15 77 aa7.81□□□□□ -1.16
TNFRSF1A-207ENST00000535958 TNFRSF6BO95407 300 aa7.81□□□□□ -1.16
TNFRSF1A-207ENST00000535958 RPL32P62910 135 aaKnown RBP7.81□□□□□ -1.16
TNFRSF1A-207ENST00000535958 MRPS36P82909 103 aaKnown RBP7.81□□□□□ -1.16
TNFRSF1A-207ENST00000535958 F8W036 122 aa7.8□□□□□ -1.16
TNFRSF1A-207ENST00000535958 S100A8P05109 93 aa7.8□□□□□ -1.16
TNFRSF1A-207ENST00000535958 RAB5AP20339 215 aa7.8□□□□□ -1.16
TNFRSF1A-207ENST00000535958 ADIRFQ15847 76 aa7.8□□□□□ -1.16
TNFRSF1A-207ENST00000535958 KRTAP11-1Q8IUC1 163 aa7.8□□□□□ -1.16
TNFRSF1A-207ENST00000535958 TRBV24-1A0A075B6N3 115 aa7.79□□□□□ -1.16
TNFRSF1A-207ENST00000535958 D6R8Y8 96 aa7.79□□□□□ -1.16
TNFRSF1A-207ENST00000535958 NDUFC2-KCTD14E9PQ53 114 aa7.79□□□□□ -1.16
TNFRSF1A-207ENST00000535958 KRTAP1-4P0C5Y4 121 aa7.79□□□□□ -1.16
TNFRSF1A-207ENST00000535958 FAM74A3Q4VXF1 159 aa7.79□□□□□ -1.16
TNFRSF1A-207ENST00000535958 PRSS2P07478 247 aa7.78□□□□□ -1.16
TNFRSF1A-207ENST00000535958 SRP19P09132 144 aaKnown RBP7.78□□□□□ -1.16
TNFRSF1A-207ENST00000535958 C2orf88Q9BSF0 95 aa7.78□□□□□ -1.16
TNFRSF1A-207ENST00000535958 CARHSP1Q9Y2V2 147 aaKnown RBP7.78□□□□□ -1.16
TNFRSF1A-207ENST00000535958 AKAP14Q86UN6 197 aa7.77□□□□□ -1.17
TNFRSF1A-207ENST00000535958 SMIM27A0A1W2PRY6 76 aa7.76□□□□□ -1.17
TNFRSF1A-207ENST00000535958 NUPR1O60356 82 aa7.76□□□□□ -1.17
TNFRSF1A-207ENST00000535958 ZNF861PO60384 105 aa7.76□□□□□ -1.17
TNFRSF1A-207ENST00000535958 PPBPP02775 128 aa7.76□□□□□ -1.17
TNFRSF1A-207ENST00000535958 CKS1BP61024 79 aa7.76□□□□□ -1.17
TNFRSF1A-207ENST00000535958 RPL23P62829 140 aaKnown RBP7.76□□□□□ -1.17
TNFRSF1A-207ENST00000535958 MRPL54Q6P161 138 aaKnown RBP7.76□□□□□ -1.17
TNFRSF1A-207ENST00000535958 C2orf82Q6UX34 121 aa7.76□□□□□ -1.17
TNFRSF1A-207ENST00000535958 Q6ZN92 141 aa7.76□□□□□ -1.17
TNFRSF1A-207ENST00000535958 TEX43Q6ZNM6 134 aa7.76□□□□□ -1.17
TNFRSF1A-207ENST00000535958 NAT8Q9UHE5 227 aa7.76□□□□□ -1.17
TNFRSF1A-207ENST00000535958 TSPAN13O95857 204 aa7.75□□□□□ -1.17
TNFRSF1A-207ENST00000535958 NPYP01303 97 aa7.75□□□□□ -1.17
TNFRSF1A-207ENST00000535958 KIAA0087Q14695 138 aa7.75□□□□□ -1.17
TNFRSF1A-207ENST00000535958 LBHQ53QV2 105 aaPredicted RBP7.75□□□□□ -1.17
TNFRSF1A-207ENST00000535958 C9orf129Q5T035 196 aaKnown RBP7.75□□□□□ -1.17
TNFRSF1A-207ENST00000535958 TMEM141Q96I45 108 aa7.75□□□□□ -1.17
TNFRSF1A-207ENST00000535958 TOMM7Q9P0U1 55 aa7.75□□□□□ -1.17
TNFRSF1A-207ENST00000535958 MUC2Q02817 5179 aa7.74□□□□□ -1.17
TNFRSF1A-207ENST00000535958 LINC00242Q5T6M2 205 aa7.74□□□□□ -1.17
TNFRSF1A-207ENST00000535958 ORMDL3Q8N138 153 aa7.74□□□□□ -1.17
TNFRSF1A-207ENST00000535958 FAM104AQ969W3 186 aa7.74□□□□□ -1.17
TNFRSF1A-207ENST00000535958 PYGO1Q9Y3Y4 419 aa7.74□□□□□ -1.17
TNFRSF1A-207ENST00000535958 IGLV4-3A0A075B6K6 122 aa7.73□□□□□ -1.17
TNFRSF1A-207ENST00000535958 KRTAP7-1Q8IUC3 87 aa7.73□□□□□ -1.17
TNFRSF1A-207ENST00000535958 LINC01561Q8N1V8 128 aa7.73□□□□□ -1.17
TNFRSF1A-207ENST00000535958 RPL28P46779 137 aaKnown RBP7.72□□□□□ -1.17
TNFRSF1A-207ENST00000535958 C6orf226Q5I0X4 101 aa7.72□□□□□ -1.17
TNFRSF1A-207ENST00000535958 TMEM136Q6ZRR5 245 aa7.72□□□□□ -1.17
TNFRSF1A-207ENST00000535958 LINC00469Q8N7U9 141 aa7.72□□□□□ -1.17
TNFRSF1A-207ENST00000535958 PRELID3AQ96N28 172 aa7.72□□□□□ -1.17
TNFRSF1A-207ENST00000535958 CTDSP1Q9GZU7 261 aa7.72□□□□□ -1.17
TNFRSF1A-207ENST00000535958 TYMSOSQ8TAI1 123 aa7.71□□□□□ -1.18
TNFRSF1A-207ENST00000535958 CYSLTR1Q9Y271 337 aa7.71□□□□□ -1.18
TNFRSF1A-207ENST00000535958 C22orf24Q9Y442 160 aa7.71□□□□□ -1.18
TNFRSF1A-207ENST00000535958 CRYGAP11844 174 aa7.7□□□□□ -1.18
TNFRSF1A-207ENST00000535958 ALKBH7Q9BT30 221 aaPredicted RBP7.7□□□□□ -1.18
TNFRSF1A-207ENST00000535958 VCX2Q9H322 139 aa7.7□□□□□ -1.18
TNFRSF1A-207ENST00000535958 MAP1LC3AQ9H492 121 aa7.7□□□□□ -1.18
TNFRSF1A-207ENST00000535958 XAGE1AQ9HD64 81 aa7.7□□□□□ -1.18
TNFRSF1A-207ENST00000535958 LOC389332A0A1B0GUA5 103 aa7.69□□□□□ -1.18
TNFRSF1A-207ENST00000535958 A0A1B0GXF2 115 aa7.69□□□□□ -1.18
TNFRSF1A-207ENST00000535958 PEA15Q15121 130 aa7.69□□□□□ -1.18
TNFRSF1A-207ENST00000535958 MRPL55Q7Z7F7 128 aaKnown RBP7.69□□□□□ -1.18
TNFRSF1A-207ENST00000535958 Q8IZM0 81 aa7.69□□□□□ -1.18
TNFRSF1A-207ENST00000535958 hCG_2014768A0A024R1R8 64 aa7.68□□□□□ -1.18
TNFRSF1A-207ENST00000535958 C2orf66Q6UXQ4 117 aa7.68□□□□□ -1.18
TNFRSF1A-207ENST00000535958 ATP5L2Q7Z4Y8 100 aa7.68□□□□□ -1.18
TNFRSF1A-207ENST00000535958 KRTAP9-2Q9BYQ4 174 aa7.68□□□□□ -1.18
TNFRSF1A-207ENST00000535958 LAMTOR2Q9Y2Q5 125 aa7.68□□□□□ -1.18
TNFRSF1A-207ENST00000535958 BCE1O60756 84 aa7.67□□□□□ -1.18
TNFRSF1A-207ENST00000535958 HERVK_113P63121 156 aa7.67□□□□□ -1.18
TNFRSF1A-207ENST00000535958 SEC11AP67812 179 aa7.67□□□□□ -1.18
TNFRSF1A-207ENST00000535958 ORMDL2Q53FV1 153 aa7.67□□□□□ -1.18
TNFRSF1A-207ENST00000535958 GEMIN7Q9H840 131 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms