RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 RNASE13Q5GAN3 156 aaKnown RBP11.29□□□□□ -0.6
SMG1-203ENST00000532700 PRSS3P2Q8NHM4 247 aa11.29□□□□□ -0.6
SMG1-203ENST00000532700 A0A087WYN8 130 aa11.28□□□□□ -0.6
SMG1-203ENST00000532700 GVQW2A0A096LPI5 108 aaPredicted RBP11.28□□□□□ -0.6
SMG1-203ENST00000532700 AP5S1Q9NUS5 200 aa11.28□□□□□ -0.6
SMG1-203ENST00000532700 C1orf196B1AJZ1 125 aa11.27□□□□□ -0.61
SMG1-203ENST00000532700 MRPS36P82909 103 aaKnown RBP11.27□□□□□ -0.61
SMG1-203ENST00000532700 COX6A2Q02221 97 aa11.27□□□□□ -0.61
SMG1-203ENST00000532700 CFAP161Q6P656 301 aa11.27□□□□□ -0.61
SMG1-203ENST00000532700 CYSLTR1Q9Y271 337 aa11.27□□□□□ -0.61
SMG1-203ENST00000532700 PYGO1Q9Y3Y4 419 aa11.27□□□□□ -0.61
SMG1-203ENST00000532700 Q6ZUT4 128 aa11.26□□□□□ -0.61
SMG1-203ENST00000532700 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.25□□□□□ -0.61
SMG1-203ENST00000532700 C2orf66Q6UXQ4 117 aa11.25□□□□□ -0.61
SMG1-203ENST00000532700 FAM104AQ969W3 186 aa11.25□□□□□ -0.61
SMG1-203ENST00000532700 YPEL4Q96NS1 127 aa11.25□□□□□ -0.61
SMG1-203ENST00000532700 A0A096LNI7 61 aa11.24□□□□□ -0.61
SMG1-203ENST00000532700 TRAV13-1A0A0B4J241 112 aa11.24□□□□□ -0.61
SMG1-203ENST00000532700 CD164L2Q6UWJ8 174 aa11.24□□□□□ -0.61
SMG1-203ENST00000532700 CBLN2Q8IUK8 224 aa11.24□□□□□ -0.61
SMG1-203ENST00000532700 IGKV2-24A0A0C4DH68 120 aa11.23□□□□□ -0.61
SMG1-203ENST00000532700 FA2HQ7L5A8 372 aa11.23□□□□□ -0.61
SMG1-203ENST00000532700 OPRPNQ99935 248 aaPredicted RBP11.23□□□□□ -0.61
SMG1-203ENST00000532700 PLAC8Q9NZF1 115 aa11.23□□□□□ -0.61
SMG1-203ENST00000532700 LINC01546A6NGU7 62 aa11.22□□□□□ -0.61
SMG1-203ENST00000532700 NPSP0C0P6 89 aa11.22□□□□□ -0.61
SMG1-203ENST00000532700 TMEM141Q96I45 108 aa11.22□□□□□ -0.61
SMG1-203ENST00000532700 LINC01549A6NIU2 74 aa11.21□□□□□ -0.61
SMG1-203ENST00000532700 IFITM10A6NMD0 228 aa11.21□□□□□ -0.61
SMG1-203ENST00000532700 Q6ZN92 141 aa11.21□□□□□ -0.61
SMG1-203ENST00000532700 IGLV4-3A0A075B6K6 122 aa11.2□□□□□ -0.62
SMG1-203ENST00000532700 MAJINQ3KP22 176 aa11.2□□□□□ -0.62
SMG1-203ENST00000532700 PAPPA-AS1Q5QFB9 102 aa11.2□□□□□ -0.62
SMG1-203ENST00000532700 TEX43Q6ZNM6 134 aa11.2□□□□□ -0.62
SMG1-203ENST00000532700 TOMM6Q96B49 74 aa11.2□□□□□ -0.62
SMG1-203ENST00000532700 IGHV1-58A0A0C4DH39 117 aa11.19□□□□□ -0.62
SMG1-203ENST00000532700 OXTP01178 125 aa11.19□□□□□ -0.62
SMG1-203ENST00000532700 C18orf32Q8TCD1 76 aa11.19□□□□□ -0.62
SMG1-203ENST00000532700 DPH3Q96FX2 82 aa11.19□□□□□ -0.62
SMG1-203ENST00000532700 C2orf88Q9BSF0 95 aa11.19□□□□□ -0.62
SMG1-203ENST00000532700 VCX2Q9H322 139 aa11.19□□□□□ -0.62
SMG1-203ENST00000532700 IGIPA6NJ69 53 aa11.18□□□□□ -0.62
SMG1-203ENST00000532700 COX7A2LO14548 114 aa11.18□□□□□ -0.62
SMG1-203ENST00000532700 MT1HL1P0DM35 61 aa11.18□□□□□ -0.62
SMG1-203ENST00000532700 MALP21145 153 aa11.18□□□□□ -0.62
SMG1-203ENST00000532700 RAB5BP61020 215 aa11.18□□□□□ -0.62
SMG1-203ENST00000532700 TIMM17AQ99595 171 aa11.18□□□□□ -0.62
SMG1-203ENST00000532700 SCGB3A1Q96QR1 104 aa11.17□□□□□ -0.62
SMG1-203ENST00000532700 LINC00614P0C842 121 aa11.16□□□□□ -0.62
SMG1-203ENST00000532700 ERASQ7Z444 233 aa11.16□□□□□ -0.62
SMG1-203ENST00000532700 STPG4Q8N801 248 aa11.16□□□□□ -0.62
SMG1-203ENST00000532700 CARD19Q96LW7 228 aa11.16□□□□□ -0.62
SMG1-203ENST00000532700 IGLV4-69A0A075B6H9 119 aa11.15□□□□□ -0.62
SMG1-203ENST00000532700 APOMO95445 188 aa11.15□□□□□ -0.62
SMG1-203ENST00000532700 Q6ZRU5 148 aa11.15□□□□□ -0.62
SMG1-203ENST00000532700 C5orf38Q86SI9 138 aa11.15□□□□□ -0.62
SMG1-203ENST00000532700 AMELXQ99217 191 aa11.15□□□□□ -0.62
SMG1-203ENST00000532700 HMCN2Q8NDA2 5059 aa11.14□□□□□ -0.63
SMG1-203ENST00000532700 IGHV3OR16-9A0A0B4J2B5 98 aa11.13□□□□□ -0.63
SMG1-203ENST00000532700 ZNF561-AS1K7EIQ3 104 aa11.13□□□□□ -0.63
SMG1-203ENST00000532700 SYCNQ0VAF6 134 aa11.13□□□□□ -0.63
SMG1-203ENST00000532700 COLCA2A8K830 154 aa11.12□□□□□ -0.63
SMG1-203ENST00000532700 TRGC2P03986 189 aa11.12□□□□□ -0.63
SMG1-203ENST00000532700 UBE2D1P51668 147 aa11.12□□□□□ -0.63
SMG1-203ENST00000532700 LINC00242Q5T6M2 205 aa11.12□□□□□ -0.63
SMG1-203ENST00000532700 LINC00173Q6ZV60 143 aa11.12□□□□□ -0.63
SMG1-203ENST00000532700 SEC11AP67812 179 aa11.11□□□□□ -0.63
SMG1-203ENST00000532700 PRR3P79522 188 aaKnown RBP11.11□□□□□ -0.63
SMG1-203ENST00000532700 URB1-AS1Q96HZ7 61 aa11.11□□□□□ -0.63
SMG1-203ENST00000532700 A0A0J9YXV3 536 aa11.1□□□□□ -0.63
SMG1-203ENST00000532700 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.1□□□□□ -0.63
SMG1-203ENST00000532700 HBDP02042 147 aa11.1□□□□□ -0.63
SMG1-203ENST00000532700 ODF1Q14990 250 aa11.1□□□□□ -0.63
SMG1-203ENST00000532700 ZC2HC1BQ5TFG8 222 aa11.1□□□□□ -0.63
SMG1-203ENST00000532700 CHCHD1Q96BP2 118 aaKnown RBP11.1□□□□□ -0.63
SMG1-203ENST00000532700 FAM19A3Q7Z5A8 133 aa11.09□□□□□ -0.63
SMG1-203ENST00000532700 OR10D4PQ8NGN7 298 aa11.09□□□□□ -0.63
SMG1-203ENST00000532700 A0A087WZ39 114 aa11.08□□□□□ -0.64
SMG1-203ENST00000532700 A0A1W2PNN7 141 aa11.08□□□□□ -0.64
SMG1-203ENST00000532700 PTTG1IPP53801 180 aa11.08□□□□□ -0.64
SMG1-203ENST00000532700 BAGE3Q86Y29 109 aa11.08□□□□□ -0.64
SMG1-203ENST00000532700 HERVK_113P63121 156 aa11.07□□□□□ -0.64
SMG1-203ENST00000532700 GAGE2BQ13066 116 aa11.07□□□□□ -0.64
SMG1-203ENST00000532700 LINC01561Q8N1V8 128 aa11.07□□□□□ -0.64
SMG1-203ENST00000532700 C7orf33Q8WU49 177 aa11.07□□□□□ -0.64
SMG1-203ENST00000532700 ORAOV1Q8WV07 137 aa11.07□□□□□ -0.64
SMG1-203ENST00000532700 C2orf48Q96LS8 159 aa11.07□□□□□ -0.64
SMG1-203ENST00000532700 GEMIN7Q9H840 131 aaKnown RBP11.07□□□□□ -0.64
SMG1-203ENST00000532700 PKIGQ9Y2B9 76 aa11.07□□□□□ -0.64
SMG1-203ENST00000532700 A0A096LNJ9 63 aa11.06□□□□□ -0.64
SMG1-203ENST00000532700 SCO1O75880 301 aa11.06□□□□□ -0.64
SMG1-203ENST00000532700 SPAG11BQ08648 103 aa11.06□□□□□ -0.64
SMG1-203ENST00000532700 PMVKQ15126 192 aa11.06□□□□□ -0.64
SMG1-203ENST00000532700 PMCHL1Q16048 86 aa11.06□□□□□ -0.64
SMG1-203ENST00000532700 C10orf25Q5T742 122 aa11.06□□□□□ -0.64
SMG1-203ENST00000532700 CAMK2N2Q96S95 79 aa11.06□□□□□ -0.64
SMG1-203ENST00000532700 CST9LQ9H4G1 147 aa11.06□□□□□ -0.64
SMG1-203ENST00000532700 F8WDY8 70 aa11.05□□□□□ -0.64
SMG1-203ENST00000532700 ATP5LO75964 103 aa11.05□□□□□ -0.64
SMG1-203ENST00000532700 PDZD11Q5EBL8 140 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms