RNA–Protein interactions for RNA: ENST00000532656.6

CTSB-226, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-226ENST00000532656 GAGE2EQ4V326 116 aa10.35□□□□□ -0.75
CTSB-226ENST00000532656 FAM104BQ5XKR9 115 aa10.35□□□□□ -0.75
CTSB-226ENST00000532656 GAGE2DQ9UEU5 116 aa10.35□□□□□ -0.75
CTSB-226ENST00000532656 F8WDY8 70 aa10.34□□□□□ -0.75
CTSB-226ENST00000532656 C6orf48Q9UBA6 75 aa10.34□□□□□ -0.75
CTSB-226ENST00000532656 NAT8BQ9UHF3 227 aa10.34□□□□□ -0.75
CTSB-226ENST00000532656 IFITM10A6NMD0 228 aa10.33□□□□□ -0.76
CTSB-226ENST00000532656 SRP19P09132 144 aaKnown RBP10.33□□□□□ -0.76
CTSB-226ENST00000532656 KRTAP1-4P0C5Y4 121 aa10.33□□□□□ -0.76
CTSB-226ENST00000532656 TLX1NBP0CAT3 122 aa10.33□□□□□ -0.76
CTSB-226ENST00000532656 C20orf78Q9BR46 151 aa10.33□□□□□ -0.76
CTSB-226ENST00000532656 IGLV1-50A0A075B6I6 118 aa10.32□□□□□ -0.76
CTSB-226ENST00000532656 M0QXV9 152 aa10.32□□□□□ -0.76
CTSB-226ENST00000532656 CKS2P33552 79 aa10.32□□□□□ -0.76
CTSB-226ENST00000532656 TMEM241Q24JQ0 296 aa10.32□□□□□ -0.76
CTSB-226ENST00000532656 KRTAP7-1Q8IUC3 87 aa10.32□□□□□ -0.76
CTSB-226ENST00000532656 SMDT1Q9H4I9 107 aa10.32□□□□□ -0.76
CTSB-226ENST00000532656 SPANXA1Q9NS26 97 aa10.32□□□□□ -0.76
CTSB-226ENST00000532656 TRBV24-1A0A075B6N3 115 aa10.31□□□□□ -0.76
CTSB-226ENST00000532656 LINC00862A6NCI5 91 aa10.31□□□□□ -0.76
CTSB-226ENST00000532656 TNFRSF6BO95407 300 aa10.31□□□□□ -0.76
CTSB-226ENST00000532656 RPL32P62910 135 aaKnown RBP10.31□□□□□ -0.76
CTSB-226ENST00000532656 UBE2BP63146 152 aa10.31□□□□□ -0.76
CTSB-226ENST00000532656 HBBP68871 147 aa10.31□□□□□ -0.76
CTSB-226ENST00000532656 SMIM2Q9BVW6 85 aa10.31□□□□□ -0.76
CTSB-226ENST00000532656 TCAPO15273 167 aa10.3□□□□□ -0.76
CTSB-226ENST00000532656 UBE2D1P51668 147 aa10.3□□□□□ -0.76
CTSB-226ENST00000532656 MRPS36P82909 103 aaKnown RBP10.3□□□□□ -0.76
CTSB-226ENST00000532656 PRR4Q16378 134 aa10.3□□□□□ -0.76
CTSB-226ENST00000532656 FAM74A3Q4VXF1 159 aa10.3□□□□□ -0.76
CTSB-226ENST00000532656 RPL23P62829 140 aaKnown RBP10.29□□□□□ -0.76
CTSB-226ENST00000532656 ADIRFQ15847 76 aa10.29□□□□□ -0.76
CTSB-226ENST00000532656 TGIF2-C20orf24A0A0A6YYL0 155 aa10.28□□□□□ -0.76
CTSB-226ENST00000532656 D6R8Y8 96 aa10.28□□□□□ -0.76
CTSB-226ENST00000532656 KIAA0087Q14695 138 aa10.28□□□□□ -0.76
CTSB-226ENST00000532656 MUC2Q02817 5179 aa10.28□□□□□ -0.76
CTSB-226ENST00000532656 SMIM27A0A1W2PRY6 76 aa10.27□□□□□ -0.77
CTSB-226ENST00000532656 NPYP01303 97 aa10.27□□□□□ -0.77
CTSB-226ENST00000532656 C2orf82Q6UX34 121 aa10.27□□□□□ -0.77
CTSB-226ENST00000532656 AKAP14Q86UN6 197 aa10.27□□□□□ -0.77
CTSB-226ENST00000532656 A0A1B0GW15 77 aa10.26□□□□□ -0.77
CTSB-226ENST00000532656 MRPL54Q6P161 138 aaKnown RBP10.26□□□□□ -0.77
CTSB-226ENST00000532656 RPL13AP40429 203 aaKnown RBP10.25□□□□□ -0.77
CTSB-226ENST00000532656 C9orf129Q5T035 196 aaKnown RBP10.25□□□□□ -0.77
CTSB-226ENST00000532656 TRBV30A0A0K0K1B3 111 aa10.24□□□□□ -0.77
CTSB-226ENST00000532656 NDUFC2-KCTD14E9PQ53 114 aa10.24□□□□□ -0.77
CTSB-226ENST00000532656 LINC00242Q5T6M2 205 aa10.24□□□□□ -0.77
CTSB-226ENST00000532656 IGLV4-3A0A075B6K6 122 aa10.23□□□□□ -0.77
CTSB-226ENST00000532656 F8W036 122 aa10.23□□□□□ -0.77
CTSB-226ENST00000532656 IFI27P40305 119 aaPredicted RBP10.23□□□□□ -0.77
CTSB-226ENST00000532656 PACRGQ96M98 296 aaPredicted RBP10.23□□□□□ -0.77
CTSB-226ENST00000532656 NAT8Q9UHE5 227 aa10.23□□□□□ -0.77
CTSB-226ENST00000532656 hCG_2014768A0A024R1R8 64 aa10.22□□□□□ -0.77
CTSB-226ENST00000532656 C9JQL5 133 aa10.22□□□□□ -0.77
CTSB-226ENST00000532656 A0A1B0GXF2 115 aa10.21□□□□□ -0.77
CTSB-226ENST00000532656 S100A8P05109 93 aa10.21□□□□□ -0.77
CTSB-226ENST00000532656 RAB5AP20339 215 aa10.21□□□□□ -0.77
CTSB-226ENST00000532656 PPBPP02775 128 aa10.2□□□□□ -0.78
CTSB-226ENST00000532656 LINC00469Q8N7U9 141 aa10.2□□□□□ -0.78
CTSB-226ENST00000532656 TMEM141Q96I45 108 aa10.2□□□□□ -0.78
CTSB-226ENST00000532656 CARHSP1Q9Y2V2 147 aaKnown RBP10.2□□□□□ -0.78
CTSB-226ENST00000532656 PYGO1Q9Y3Y4 419 aa10.2□□□□□ -0.78
CTSB-226ENST00000532656 ZNF861PO60384 105 aa10.19□□□□□ -0.78
CTSB-226ENST00000532656 TSPAN13O95857 204 aa10.19□□□□□ -0.78
CTSB-226ENST00000532656 ZC2HC1BQ5TFG8 222 aa10.19□□□□□ -0.78
CTSB-226ENST00000532656 ORMDL3Q8N138 153 aa10.19□□□□□ -0.78
CTSB-226ENST00000532656 TEX43Q6ZNM6 134 aa10.18□□□□□ -0.78
CTSB-226ENST00000532656 PRELID3AQ96N28 172 aa10.18□□□□□ -0.78
CTSB-226ENST00000532656 SRSF3P84103 164 aaKnown RBP10.17□□□□□ -0.78
CTSB-226ENST00000532656 TMEM136Q6ZRR5 245 aa10.17□□□□□ -0.78
CTSB-226ENST00000532656 TOMM7Q9P0U1 55 aa10.17□□□□□ -0.78
CTSB-226ENST00000532656 A0A0U1RQV1 116 aa10.16□□□□□ -0.78
CTSB-226ENST00000532656 PRSS2P07478 247 aa10.16□□□□□ -0.78
CTSB-226ENST00000532656 LINC01561Q8N1V8 128 aa10.16□□□□□ -0.78
CTSB-226ENST00000532656 C2orf88Q9BSF0 95 aa10.16□□□□□ -0.78
CTSB-226ENST00000532656 XAGE1AQ9HD64 81 aa10.16□□□□□ -0.78
CTSB-226ENST00000532656 C22orf24Q9Y442 160 aa10.16□□□□□ -0.78
CTSB-226ENST00000532656 LOC389332A0A1B0GUA5 103 aa10.15□□□□□ -0.78
CTSB-226ENST00000532656 NUPR1O60356 82 aa10.15□□□□□ -0.78
CTSB-226ENST00000532656 CKS1BP61024 79 aa10.15□□□□□ -0.78
CTSB-226ENST00000532656 LINC00173Q6ZV60 143 aa10.15□□□□□ -0.78
CTSB-226ENST00000532656 CTDSP1Q9GZU7 261 aa10.15□□□□□ -0.78
CTSB-226ENST00000532656 C6orf226Q5I0X4 101 aa10.14□□□□□ -0.79
CTSB-226ENST00000532656 Q6ZN92 141 aa10.14□□□□□ -0.79
CTSB-226ENST00000532656 A0A087X002 238 aa10.13□□□□□ -0.79
CTSB-226ENST00000532656 PEA15Q15121 130 aa10.13□□□□□ -0.79
CTSB-226ENST00000532656 A0A1B0GVG6 124 aa10.12□□□□□ -0.79
CTSB-226ENST00000532656 LBHQ53QV2 105 aaPredicted RBP10.12□□□□□ -0.79
CTSB-226ENST00000532656 C2orf66Q6UXQ4 117 aa10.12□□□□□ -0.79
CTSB-226ENST00000532656 ATP5L2Q7Z4Y8 100 aa10.12□□□□□ -0.79
CTSB-226ENST00000532656 Q8IZM0 81 aa10.12□□□□□ -0.79
CTSB-226ENST00000532656 AMELXQ99217 191 aa10.12□□□□□ -0.79
CTSB-226ENST00000532656 ALKBH7Q9BT30 221 aaPredicted RBP10.12□□□□□ -0.79
CTSB-226ENST00000532656 KRTAP9-2Q9BYQ4 174 aa10.12□□□□□ -0.79
CTSB-226ENST00000532656 VCX2Q9H322 139 aa10.12□□□□□ -0.79
CTSB-226ENST00000532656 MAP1LC3AQ9H492 121 aa10.12□□□□□ -0.79
CTSB-226ENST00000532656 CYSLTR1Q9Y271 337 aa10.12□□□□□ -0.79
CTSB-226ENST00000532656 PRSS47A8MTI9 375 aa10.11□□□□□ -0.79
CTSB-226ENST00000532656 RPL28P46779 137 aaKnown RBP10.09□□□□□ -0.79
CTSB-226ENST00000532656 MRPL55Q7Z7F7 128 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms