RNA–Protein interactions for RNA: ENST00000530720.1

CTNND1-226, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 832 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-226ENST00000530720 TRGC1P0CF51 173 aa2.75□□□□□ -1.97
CTNND1-226ENST00000530720 XCL1P47992 114 aa2.75□□□□□ -1.97
CTNND1-226ENST00000530720 RPS20P60866 119 aaKnown RBP2.75□□□□□ -1.97
CTNND1-226ENST00000530720 RIGQ13278 110 aa2.75□□□□□ -1.97
CTNND1-226ENST00000530720 KRTAP11-1Q8IUC1 163 aa2.75□□□□□ -1.97
CTNND1-226ENST00000530720 OR5A1Q8NGJ0 315 aa2.75□□□□□ -1.97
CTNND1-226ENST00000530720 SMIM12Q96EX1 92 aa2.75□□□□□ -1.97
CTNND1-226ENST00000530720 MANBALQ9NQG1 85 aa2.75□□□□□ -1.97
CTNND1-226ENST00000530720 GNG13Q9P2W3 67 aa2.75□□□□□ -1.97
CTNND1-226ENST00000530720 TRBV6-5A0A0K0K1A5 114 aa2.74□□□□□ -1.97
CTNND1-226ENST00000530720 SDHAF1A6NFY7 115 aa2.74□□□□□ -1.97
CTNND1-226ENST00000530720 H7C423 109 aa2.74□□□□□ -1.97
CTNND1-226ENST00000530720 CCL25O15444 150 aa2.74□□□□□ -1.97
CTNND1-226ENST00000530720 NCR2O95944 276 aa2.74□□□□□ -1.97
CTNND1-226ENST00000530720 TSHBP01222 138 aa2.74□□□□□ -1.97
CTNND1-226ENST00000530720 IFNA1P01562 189 aa2.74□□□□□ -1.97
CTNND1-226ENST00000530720 APCSP02743 223 aa2.74□□□□□ -1.97
CTNND1-226ENST00000530720 GNG4P50150 75 aa2.74□□□□□ -1.97
CTNND1-226ENST00000530720 MEF2BQ02080 365 aaPredicted RBP2.74□□□□□ -1.97
CTNND1-226ENST00000530720 REG3GQ6UW15 175 aa2.74□□□□□ -1.97
CTNND1-226ENST00000530720 Q6ZRP5 223 aa2.74□□□□□ -1.97
CTNND1-226ENST00000530720 PRR26Q8N8Z3 221 aa2.74□□□□□ -1.97
CTNND1-226ENST00000530720 CARD19Q96LW7 228 aa2.74□□□□□ -1.97
CTNND1-226ENST00000530720 RNASE7Q9H1E1 156 aaKnown RBP2.74□□□□□ -1.97
CTNND1-226ENST00000530720 PSORS1C2Q9UIG4 136 aa2.74□□□□□ -1.97
CTNND1-226ENST00000530720 IGLV4-69A0A075B6H9 119 aa2.73□□□□□ -1.97
CTNND1-226ENST00000530720 IGHV1-58A0A0C4DH39 117 aa2.73□□□□□ -1.97
CTNND1-226ENST00000530720 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.73□□□□□ -1.97
CTNND1-226ENST00000530720 KRTAP1-4P0C5Y4 121 aa2.73□□□□□ -1.97
CTNND1-226ENST00000530720 BCL2P10415 239 aa2.73□□□□□ -1.97
CTNND1-226ENST00000530720 ZNF25P17030 456 aaPredicted RBP2.73□□□□□ -1.97
CTNND1-226ENST00000530720 SYCNQ0VAF6 134 aa2.73□□□□□ -1.97
CTNND1-226ENST00000530720 AMMECR1LQ6DCA0 310 aa2.73□□□□□ -1.97
CTNND1-226ENST00000530720 MRPL52Q86TS9 123 aaKnown RBP2.73□□□□□ -1.97
CTNND1-226ENST00000530720 KRTAP7-1Q8IUC3 87 aa2.73□□□□□ -1.97
CTNND1-226ENST00000530720 NUP35Q8NFH5 326 aa2.73□□□□□ -1.97
CTNND1-226ENST00000530720 FAM104AQ969W3 186 aa2.73□□□□□ -1.97
CTNND1-226ENST00000530720 RPP21Q9H633 154 aaKnown RBP2.73□□□□□ -1.97
CTNND1-226ENST00000530720 CDC42SE2Q9NRR3 84 aa2.73□□□□□ -1.97
CTNND1-226ENST00000530720 TMEM242Q9NWH2 141 aa2.73□□□□□ -1.97
CTNND1-226ENST00000530720 LINC00474Q9P2X8 69 aa2.73□□□□□ -1.97
CTNND1-226ENST00000530720 TRBV27A0A0K0K1C4 114 aa2.72□□□□□ -1.97
CTNND1-226ENST00000530720 KANTRA0A1W2PQU2 76 aa2.72□□□□□ -1.97
CTNND1-226ENST00000530720 I3L3M4 83 aa2.72□□□□□ -1.97
CTNND1-226ENST00000530720 PDE6DO43924 150 aa2.72□□□□□ -1.97
CTNND1-226ENST00000530720 PMCHP20382 165 aa2.72□□□□□ -1.97
CTNND1-226ENST00000530720 MT3P25713 68 aa2.72□□□□□ -1.97
CTNND1-226ENST00000530720 POLR2KP53803 58 aaKnown RBP2.72□□□□□ -1.97
CTNND1-226ENST00000530720 RGS21Q2M5E4 152 aa2.72□□□□□ -1.97
CTNND1-226ENST00000530720 C9orf116Q5BN46 136 aaPredicted RBP2.72□□□□□ -1.97
CTNND1-226ENST00000530720 UQCC3Q6UW78 93 aa2.72□□□□□ -1.97
CTNND1-226ENST00000530720 PHF5AQ7RTV0 110 aaKnown RBP2.72□□□□□ -1.97
CTNND1-226ENST00000530720 ZNF664Q8N3J9 261 aa2.72□□□□□ -1.97
CTNND1-226ENST00000530720 C2orf48Q96LS8 159 aa2.72□□□□□ -1.97
CTNND1-226ENST00000530720 MED9Q9NWA0 146 aa2.72□□□□□ -1.97
CTNND1-226ENST00000530720 LOC107984640A0A0U1RRK4 108 aa2.71□□□□□ -1.98
CTNND1-226ENST00000530720 FAM168BA1KXE4 195 aa2.71□□□□□ -1.98
CTNND1-226ENST00000530720 APOMO95445 188 aa2.71□□□□□ -1.98
CTNND1-226ENST00000530720 RNASE13Q5GAN3 156 aaKnown RBP2.71□□□□□ -1.98
CTNND1-226ENST00000530720 FAM231DQ6ZW35 169 aa2.71□□□□□ -1.98
CTNND1-226ENST00000530720 MRAP2Q96G30 205 aa2.71□□□□□ -1.98
CTNND1-226ENST00000530720 PPDPFQ9H3Y8 114 aa2.71□□□□□ -1.98
CTNND1-226ENST00000530720 BATF3Q9NR55 127 aa2.71□□□□□ -1.98
CTNND1-226ENST00000530720 UBE2D4Q9Y2X8 147 aa2.71□□□□□ -1.98
CTNND1-226ENST00000530720 MUC17Q685J3 4493 aa2.71□□□□□ -1.98
CTNND1-226ENST00000530720 FAT4Q6V0I7 4981 aa2.7□□□□□ -1.98
CTNND1-226ENST00000530720 C7orf77A4D0Y5 90 aa2.7□□□□□ -1.98
CTNND1-226ENST00000530720 H0Y9J4 135 aa2.7□□□□□ -1.98
CTNND1-226ENST00000530720 TEX46H3BTG2 121 aa2.7□□□□□ -1.98
CTNND1-226ENST00000530720 COX7A2LO14548 114 aa2.7□□□□□ -1.98
CTNND1-226ENST00000530720 IGLV7-43P04211 117 aa2.7□□□□□ -1.98
CTNND1-226ENST00000530720 RAB4AP20338 218 aa2.7□□□□□ -1.98
CTNND1-226ENST00000530720 EIF5AP63241 154 aaKnown RBP2.7□□□□□ -1.98
CTNND1-226ENST00000530720 SS18Q15532 418 aa2.7□□□□□ -1.98
CTNND1-226ENST00000530720 C1orf137Q5JT78 98 aa2.7□□□□□ -1.98
CTNND1-226ENST00000530720 TEX261Q6UWH6 196 aa2.7□□□□□ -1.98
CTNND1-226ENST00000530720 Q6ZUT4 128 aa2.7□□□□□ -1.98
CTNND1-226ENST00000530720 AMN1Q8IY45 258 aa2.7□□□□□ -1.98
CTNND1-226ENST00000530720 OPRPNQ99935 248 aaPredicted RBP2.7□□□□□ -1.98
CTNND1-226ENST00000530720 TMEM191AQ9H0A3 160 aa2.7□□□□□ -1.98
CTNND1-226ENST00000530720 ST20Q9HBF5 79 aa2.7□□□□□ -1.98
CTNND1-226ENST00000530720 BIN3Q9NQY0 253 aa2.7□□□□□ -1.98
CTNND1-226ENST00000530720 PKIGQ9Y2B9 76 aa2.7□□□□□ -1.98
CTNND1-226ENST00000530720 IGHV3OR16-9A0A0B4J2B5 98 aa2.69□□□□□ -1.98
CTNND1-226ENST00000530720 HIGD1CA8MV81 97 aa2.69□□□□□ -1.98
CTNND1-226ENST00000530720 C1orf196B1AJZ1 125 aa2.69□□□□□ -1.98
CTNND1-226ENST00000530720 SMKR1H3BMG3 65 aa2.69□□□□□ -1.98
CTNND1-226ENST00000530720 MT-ND6P03923 174 aa2.69□□□□□ -1.98
CTNND1-226ENST00000530720 TLX1NBP0CAT3 122 aa2.69□□□□□ -1.98
CTNND1-226ENST00000530720 CTAG1AP78358 180 aa2.69□□□□□ -1.98
CTNND1-226ENST00000530720 RPL18AQ02543 176 aaKnown RBP2.69□□□□□ -1.98
CTNND1-226ENST00000530720 EIF5AL1Q6IS14 154 aaKnown RBP2.69□□□□□ -1.98
CTNND1-226ENST00000530720 C5orf38Q86SI9 138 aa2.69□□□□□ -1.98
CTNND1-226ENST00000530720 TMEM101Q96IK0 257 aa2.69□□□□□ -1.98
CTNND1-226ENST00000530720 BTF3L4Q96K17 158 aa2.69□□□□□ -1.98
CTNND1-226ENST00000530720 CAMK2N2Q96S95 79 aa2.69□□□□□ -1.98
CTNND1-226ENST00000530720 MRPL35Q9NZE8 188 aaKnown RBP2.69□□□□□ -1.98
CTNND1-226ENST00000530720 C6orf48Q9UBA6 75 aa2.69□□□□□ -1.98
CTNND1-226ENST00000530720 TRAV13-1A0A0B4J241 112 aa2.68□□□□□ -1.98
CTNND1-226ENST00000530720 A0A1B0GUT8 65 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms