RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 SETXQ7Z333 2677 aaKnown RBP8.34□□□□□ -1.07
USP35-207ENST00000530546 HILS1P60008 231 aa8.34□□□□□ -1.07
USP35-207ENST00000530546 SDIM1Q6ZPB5 146 aa8.34□□□□□ -1.07
USP35-207ENST00000530546 I3L3M4 83 aa8.34□□□□□ -1.07
USP35-207ENST00000530546 RHOHQ15669 191 aa8.34□□□□□ -1.07
USP35-207ENST00000530546 C11orf72Q8NBR9 251 aa8.34□□□□□ -1.08
USP35-207ENST00000530546 CLEC2BQ92478 149 aa8.34□□□□□ -1.08
USP35-207ENST00000530546 LY6G6DO95868 133 aa8.33□□□□□ -1.08
USP35-207ENST00000530546 RPL35AP18077 110 aaKnown RBP8.33□□□□□ -1.08
USP35-207ENST00000530546 C1orf158Q8N1D5 194 aa8.33□□□□□ -1.08
USP35-207ENST00000530546 MIAQ16674 131 aa8.33□□□□□ -1.08
USP35-207ENST00000530546 GAGE2AQ6NT46 116 aa8.33□□□□□ -1.08
USP35-207ENST00000530546 C5orf38Q86SI9 138 aa8.33□□□□□ -1.08
USP35-207ENST00000530546 IGHV3-38A0A0C4DH36 116 aa8.32□□□□□ -1.08
USP35-207ENST00000530546 PRSS2P07478 247 aa8.32□□□□□ -1.08
USP35-207ENST00000530546 NACAE9PAV3 2078 aa8.32□□□□□ -1.08
USP35-207ENST00000530546 TRGV1A0A0A0MS02 117 aa8.31□□□□□ -1.08
USP35-207ENST00000530546 IGHV3-30-3P0DP02 117 aa8.31□□□□□ -1.08
USP35-207ENST00000530546 C20orf203Q8NBC4 194 aa8.31□□□□□ -1.08
USP35-207ENST00000530546 IGHV3-64A0A075B6Q5 118 aa8.31□□□□□ -1.08
USP35-207ENST00000530546 ADARB2-AS1A8MUL3 147 aa8.31□□□□□ -1.08
USP35-207ENST00000530546 IGHV3-53P01767 116 aa8.31□□□□□ -1.08
USP35-207ENST00000530546 SMCR5Q8TEV8 140 aa8.31□□□□□ -1.08
USP35-207ENST00000530546 TIMM21Q9BVV7 248 aa8.31□□□□□ -1.08
USP35-207ENST00000530546 TRAV8-3A0A0A6YYJ7 113 aa8.31□□□□□ -1.08
USP35-207ENST00000530546 F5H768 121 aa8.31□□□□□ -1.08
USP35-207ENST00000530546 ATOX1O00244 68 aa8.31□□□□□ -1.08
USP35-207ENST00000530546 RNASE13Q5GAN3 156 aaKnown RBP8.3□□□□□ -1.08
USP35-207ENST00000530546 FN1P02751 2386 aaKnown RBP8.3□□□□□ -1.08
USP35-207ENST00000530546 HIST1H4AP62805 103 aaKnown RBP8.3□□□□□ -1.08
USP35-207ENST00000530546 C2orf48Q96LS8 159 aa8.3□□□□□ -1.08
USP35-207ENST00000530546 KRTAP10-3P60369 221 aa8.29□□□□□ -1.08
USP35-207ENST00000530546 KLK5Q9Y337 293 aaPredicted RBP8.29□□□□□ -1.08
USP35-207ENST00000530546 A0A0J9YXV3 536 aa8.29□□□□□ -1.08
USP35-207ENST00000530546 INAFM1C9JVW0 142 aa8.29□□□□□ -1.08
USP35-207ENST00000530546 TIMM17BO60830 172 aa8.28□□□□□ -1.08
USP35-207ENST00000530546 IGLV1-51P01701 117 aa8.28□□□□□ -1.08
USP35-207ENST00000530546 ADAMTSL4-AS1Q5T5F5 129 aa8.28□□□□□ -1.08
USP35-207ENST00000530546 EDA2RQ9HAV5 297 aa8.28□□□□□ -1.08
USP35-207ENST00000530546 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.28□□□□□ -1.08
USP35-207ENST00000530546 IGKV2-29A2NJV5 120 aaPredicted RBP8.28□□□□□ -1.08
USP35-207ENST00000530546 PF4P02776 101 aa8.28□□□□□ -1.08
USP35-207ENST00000530546 TMEM258P61165 79 aa8.28□□□□□ -1.08
USP35-207ENST00000530546 Q6ZTI0 123 aa8.28□□□□□ -1.08
USP35-207ENST00000530546 DAND5Q8N907 189 aa8.28□□□□□ -1.08
USP35-207ENST00000530546 LINC00467Q9BRT7 94 aa8.28□□□□□ -1.08
USP35-207ENST00000530546 IGLV4-3A0A075B6K6 122 aa8.28□□□□□ -1.08
USP35-207ENST00000530546 IGHV1-58A0A0C4DH39 117 aa8.28□□□□□ -1.08
USP35-207ENST00000530546 RS1O15537 224 aa8.28□□□□□ -1.08
USP35-207ENST00000530546 TRACP01848 142 aa8.28□□□□□ -1.08
USP35-207ENST00000530546 NDUFA12Q9UI09 145 aa8.28□□□□□ -1.08
USP35-207ENST00000530546 BEAN1Q3B7T3 259 aa8.27□□□□□ -1.09
USP35-207ENST00000530546 NOP10Q9NPE3 64 aaKnown RBP8.27□□□□□ -1.09
USP35-207ENST00000530546 C2CD3Q4AC94 2353 aa8.27□□□□□ -1.09
USP35-207ENST00000530546 MRPS36P82909 103 aaKnown RBP8.27□□□□□ -1.09
USP35-207ENST00000530546 MRAPQ8TCY5 172 aa8.27□□□□□ -1.09
USP35-207ENST00000530546 GIG44P09565 113 aaPredicted RBP8.26□□□□□ -1.09
USP35-207ENST00000530546 OTOGQ6ZRI0 2925 aa8.26□□□□□ -1.09
USP35-207ENST00000530546 COX7A2LO14548 114 aa8.26□□□□□ -1.09
USP35-207ENST00000530546 BAHCC1Q9P281 2608 aa8.26□□□□□ -1.09
USP35-207ENST00000530546 INAFM2P0DMQ5 153 aa8.25□□□□□ -1.09
USP35-207ENST00000530546 PIK3CD-AS1Q5SR53 167 aa8.25□□□□□ -1.09
USP35-207ENST00000530546 PYGO1Q9Y3Y4 419 aa8.25□□□□□ -1.09
USP35-207ENST00000530546 C19orf73Q9NVV2 129 aa8.25□□□□□ -1.09
USP35-207ENST00000530546 FAM222AQ5U5X8 452 aa8.25□□□□□ -1.09
USP35-207ENST00000530546 VSIG2Q96IQ7 327 aa8.25□□□□□ -1.09
USP35-207ENST00000530546 CHCHD7Q9BUK0 85 aa8.25□□□□□ -1.09
USP35-207ENST00000530546 CMC4P56277 68 aaPredicted RBP8.24□□□□□ -1.09
USP35-207ENST00000530546 DAZ2Q13117 558 aaKnown RBP8.24□□□□□ -1.09
USP35-207ENST00000530546 DAZ4Q86SG3 579 aaKnown RBP8.24□□□□□ -1.09
USP35-207ENST00000530546 DPH3Q96FX2 82 aa8.24□□□□□ -1.09
USP35-207ENST00000530546 DAZ3Q9NR90 486 aaKnown RBP8.24□□□□□ -1.09
USP35-207ENST00000530546 hADV29S1A0JD25 119 aa8.24□□□□□ -1.09
USP35-207ENST00000530546 RPL18AQ02543 176 aaKnown RBP8.23□□□□□ -1.09
USP35-207ENST00000530546 IL17DQ8TAD2 202 aa8.23□□□□□ -1.09
USP35-207ENST00000530546 TRGV2A0A075B6R0 118 aa8.22□□□□□ -1.09
USP35-207ENST00000530546 KIR2DL5BQ8NHK3 375 aa8.22□□□□□ -1.09
USP35-207ENST00000530546 SPATA3Q8NHX4 192 aa8.22□□□□□ -1.09
USP35-207ENST00000530546 FAM104AQ969W3 186 aa8.22□□□□□ -1.09
USP35-207ENST00000530546 TINCRA0A1B0GVN0 87 aa8.22□□□□□ -1.09
USP35-207ENST00000530546 NPC2P61916 151 aa8.22□□□□□ -1.09
USP35-207ENST00000530546 COPS9Q8WXC6 57 aa8.22□□□□□ -1.09
USP35-207ENST00000530546 SEC61GP60059 68 aa8.22□□□□□ -1.09
USP35-207ENST00000530546 UBE2D4Q9Y2X8 147 aa8.22□□□□□ -1.09
USP35-207ENST00000530546 TIRAPP58753 221 aa8.21□□□□□ -1.09
USP35-207ENST00000530546 DGAT2L7PQ6IED9 249 aa8.21□□□□□ -1.09
USP35-207ENST00000530546 SERP2Q8N6R1 65 aa8.21□□□□□ -1.09
USP35-207ENST00000530546 LINC00482Q8N8I6 264 aa8.21□□□□□ -1.09
USP35-207ENST00000530546 BAALC-AS2P0C853 105 aa8.21□□□□□ -1.1
USP35-207ENST00000530546 CIRBPQ14011 172 aaKnown RBP8.21□□□□□ -1.1
USP35-207ENST00000530546 K7EQD1 137 aa8.2□□□□□ -1.1
USP35-207ENST00000530546 RPL36AP83881 106 aaKnown RBP8.2□□□□□ -1.1
USP35-207ENST00000530546 RPL36ALQ969Q0 106 aaKnown RBP8.2□□□□□ -1.1
USP35-207ENST00000530546 C16orf74Q96GX8 76 aa8.2□□□□□ -1.1
USP35-207ENST00000530546 NSD1Q96L73 2696 aaPredicted RBP8.2□□□□□ -1.1
USP35-207ENST00000530546 HIVEP1P15822 2718 aa8.2□□□□□ -1.1
USP35-207ENST00000530546 LOC100131303A0A0U1RQF7 123 aa8.19□□□□□ -1.1
USP35-207ENST00000530546 PLAC8L1A1L4L8 177 aa8.19□□□□□ -1.1
USP35-207ENST00000530546 NDUFA1O15239 70 aa8.19□□□□□ -1.1
USP35-207ENST00000530546 CSNK1G2-AS1Q8NCQ2 148 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms