RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 IGKV2-40A0A087WW87 121 aaPredicted RBP1.67□□□□□ -2.14
SKP1-212ENST00000523966 TRAV8-1A0A0A6YYK1 113 aa1.67□□□□□ -2.14
SKP1-212ENST00000523966 TGIF2-C20orf24A0A0A6YYL0 155 aa1.67□□□□□ -2.14
SKP1-212ENST00000523966 TRAV21A0A0B4J279 112 aa1.67□□□□□ -2.14
SKP1-212ENST00000523966 A0A1B0GUT8 65 aa1.67□□□□□ -2.14
SKP1-212ENST00000523966 TMEM189A5PLL7 270 aa1.67□□□□□ -2.14
SKP1-212ENST00000523966 C19orf71A6NCJ1 209 aa1.67□□□□□ -2.14
SKP1-212ENST00000523966 OR4C46A6NHA9 309 aa1.67□□□□□ -2.14
SKP1-212ENST00000523966 KNCNA6PVL3 124 aa1.67□□□□□ -2.14
SKP1-212ENST00000523966 HIGD1CA8MV81 97 aa1.67□□□□□ -2.14
SKP1-212ENST00000523966 M0R3E3 92 aa1.67□□□□□ -2.14
SKP1-212ENST00000523966 SLC17A3O00476 420 aa1.67□□□□□ -2.14
SKP1-212ENST00000523966 UBE2L6O14933 153 aa1.67□□□□□ -2.14
SKP1-212ENST00000523966 IGKV2D-40P01614 121 aaPredicted RBP1.67□□□□□ -2.14
SKP1-212ENST00000523966 TRGC2P03986 189 aa1.67□□□□□ -2.14
SKP1-212ENST00000523966 CXCL1P09341 107 aa1.67□□□□□ -2.14
SKP1-212ENST00000523966 INSL3P51460 131 aa1.67□□□□□ -2.14
SKP1-212ENST00000523966 RAB4BP61018 213 aa1.67□□□□□ -2.14
SKP1-212ENST00000523966 HBBP68871 147 aa1.67□□□□□ -2.14
SKP1-212ENST00000523966 FOXI2Q6ZQN5 318 aa1.67□□□□□ -2.14
SKP1-212ENST00000523966 SMIM15Q7Z3B0 74 aa1.67□□□□□ -2.14
SKP1-212ENST00000523966 NDUFA11Q86Y39 141 aa1.67□□□□□ -2.14
SKP1-212ENST00000523966 Q8NDZ9 215 aa1.67□□□□□ -2.14
SKP1-212ENST00000523966 OR2D3Q8NGH3 330 aa1.67□□□□□ -2.14
SKP1-212ENST00000523966 DYNLRB2Q8TF09 96 aa1.67□□□□□ -2.14
SKP1-212ENST00000523966 DCANP1Q8TF63 244 aa1.67□□□□□ -2.14
SKP1-212ENST00000523966 DNAJC30Q96LL9 226 aa1.67□□□□□ -2.14
SKP1-212ENST00000523966 AGPAT4-IT1Q9H0P7 198 aa1.67□□□□□ -2.14
SKP1-212ENST00000523966 RNASE7Q9H1E1 156 aaKnown RBP1.67□□□□□ -2.14
SKP1-212ENST00000523966 MS4A6AQ9H2W1 248 aa1.67□□□□□ -2.14
SKP1-212ENST00000523966 SETXQ7Z333 2677 aaKnown RBP1.67□□□□□ -2.14
SKP1-212ENST00000523966 TEP1Q99973 2627 aaKnown RBP1.66□□□□□ -2.14
SKP1-212ENST00000523966 ZNF705FA8MVS1 300 aaPredicted RBP1.66□□□□□ -2.14
SKP1-212ENST00000523966 HIST1H2BKO60814 126 aa1.66□□□□□ -2.14
SKP1-212ENST00000523966 PPP1R17O96001 155 aa1.66□□□□□ -2.14
SKP1-212ENST00000523966 PPBPP02775 128 aa1.66□□□□□ -2.14
SKP1-212ENST00000523966 HIST1H2BJP06899 126 aa1.66□□□□□ -2.14
SKP1-212ENST00000523966 GPX1P07203 203 aa1.66□□□□□ -2.14
SKP1-212ENST00000523966 HIST1H2BOP23527 126 aa1.66□□□□□ -2.14
SKP1-212ENST00000523966 HIST1H2BBP33778 126 aa1.66□□□□□ -2.14
SKP1-212ENST00000523966 TCL1AP56279 114 aa1.66□□□□□ -2.14
SKP1-212ENST00000523966 HIST1H2BDP58876 126 aa1.66□□□□□ -2.14
SKP1-212ENST00000523966 HIST1H2BCP62807 126 aa1.66□□□□□ -2.14
SKP1-212ENST00000523966 FABP9Q0Z7S8 132 aa1.66□□□□□ -2.14
SKP1-212ENST00000523966 HIST2H2BEQ16778 126 aa1.66□□□□□ -2.14
SKP1-212ENST00000523966 DEFB114Q30KQ6 69 aa1.66□□□□□ -2.14
SKP1-212ENST00000523966 KRTAP6-3Q3LI67 103 aa1.66□□□□□ -2.14
SKP1-212ENST00000523966 FAM229BQ4G0N7 80 aa1.66□□□□□ -2.14
SKP1-212ENST00000523966 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.66□□□□□ -2.14
SKP1-212ENST00000523966 C10orf99Q6UWK7 81 aa1.66□□□□□ -2.14
SKP1-212ENST00000523966 Q6ZRU5 148 aa1.66□□□□□ -2.14
SKP1-212ENST00000523966 NUP35Q8NFH5 326 aa1.66□□□□□ -2.14
SKP1-212ENST00000523966 HIST1H2BHQ93079 126 aa1.66□□□□□ -2.14
SKP1-212ENST00000523966 ZC2HC1AQ96GY0 325 aa1.66□□□□□ -2.14
SKP1-212ENST00000523966 PACRGQ96M98 296 aaPredicted RBP1.66□□□□□ -2.14
SKP1-212ENST00000523966 HIST1H2BNQ99877 126 aa1.66□□□□□ -2.14
SKP1-212ENST00000523966 HIST1H2BMQ99879 126 aa1.66□□□□□ -2.14
SKP1-212ENST00000523966 UPK3BQ9BT76 320 aa1.66□□□□□ -2.14
SKP1-212ENST00000523966 CNFNQ9BYD5 112 aa1.66□□□□□ -2.14
SKP1-212ENST00000523966 OTOGQ6ZRI0 2925 aa1.66□□□□□ -2.14
SKP1-212ENST00000523966 NBPF19A0A087WUL8 3843 aa1.65□□□□□ -2.14
SKP1-212ENST00000523966 SVEP1Q4LDE5 3571 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 CSMD2Q7Z408 3487 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 IGKV3-7A0A075B6H7 116 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 LOC105371267A0A1B0GV96 52 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 C7orf71A4D174 169 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 A8MTW9 85 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 OR11H12B2RN74 326 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 TRGC1P0CF51 173 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 HLA-DRB4P13762 266 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 S100A4P26447 101 aaKnown RBP1.65□□□□□ -2.15
SKP1-212ENST00000523966 HLA-DMBP28068 263 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 RNASE4P34096 147 aaKnown RBP1.65□□□□□ -2.15
SKP1-212ENST00000523966 ASIPP42127 132 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 HINT1P49773 126 aaPredicted RBP1.65□□□□□ -2.15
SKP1-212ENST00000523966 CRIP1P50238 77 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 AKR1D1P51857 326 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 NDUFA6P56556 154 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 TSPEAR-AS2P59090 65 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 HERVK_113P63121 156 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 Q0VG73 95 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 DEFB136Q30KP8 78 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 TDRG1Q3Y452 100 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 PSMG4Q5JS54 123 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 SPANXN1Q5VSR9 72 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 MRPL54Q6P161 138 aaKnown RBP1.65□□□□□ -2.15
SKP1-212ENST00000523966 LYZL1Q6UWQ5 148 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 AMTNQ6UX39 209 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 LINC00322Q6ZN03 302 aaPredicted RBP1.65□□□□□ -2.15
SKP1-212ENST00000523966 BAGE3Q86Y29 109 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 Q8TAT8 98 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 SMR3AQ99954 134 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 MIEN1Q9BRT3 115 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 TMEM191AQ9H0A3 160 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 LAMTOR2Q9Y2Q5 125 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 HLA-DRB4X5D2U9 266 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 NIPBLQ6KC79 2804 aaeCLIP1.65□□□□□ -2.15
SKP1-212ENST00000523966 COL6A5A8TX70 2615 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 MAST4O15021 2626 aa1.65□□□□□ -2.15
SKP1-212ENST00000523966 MUC4Q99102 2169 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms