RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 PRO1933Q9H354 126 aa6.32□□□□□ -1.4
SDCBP-212ENST00000523483 SMIM6P0DI80 62 aa6.32□□□□□ -1.4
SDCBP-212ENST00000523483 MALP21145 153 aa6.32□□□□□ -1.4
SDCBP-212ENST00000523483 DNAH10OSP0CZ25 163 aa6.32□□□□□ -1.4
SDCBP-212ENST00000523483 SPATA45Q537H7 98 aa6.32□□□□□ -1.4
SDCBP-212ENST00000523483 GAGE12HA6NDE8 117 aa6.31□□□□□ -1.4
SDCBP-212ENST00000523483 LECT2O14960 151 aa6.31□□□□□ -1.4
SDCBP-212ENST00000523483 C14orf144Q96I85 54 aa6.31□□□□□ -1.4
SDCBP-212ENST00000523483 TTTY13Q9BZ97 58 aa6.31□□□□□ -1.4
SDCBP-212ENST00000523483 PCP4L1A6NKN8 68 aa6.31□□□□□ -1.4
SDCBP-212ENST00000523483 HERVK_113P63121 156 aa6.31□□□□□ -1.4
SDCBP-212ENST00000523483 TP73-AS1Q9UF72 201 aa6.31□□□□□ -1.4
SDCBP-212ENST00000523483 PSCAO43653 123 aa6.31□□□□□ -1.4
SDCBP-212ENST00000523483 ZNF22P17026 224 aaPredicted RBP6.31□□□□□ -1.4
SDCBP-212ENST00000523483 ANKRD39Q53RE8 183 aa6.31□□□□□ -1.4
SDCBP-212ENST00000523483 KRTAP1-5Q9BYS1 174 aa6.31□□□□□ -1.4
SDCBP-212ENST00000523483 SEC11AP67812 179 aa6.3□□□□□ -1.4
SDCBP-212ENST00000523483 LINC00526Q96FQ7 95 aa6.3□□□□□ -1.4
SDCBP-212ENST00000523483 C3orf84H3BNL1 204 aa6.3□□□□□ -1.4
SDCBP-212ENST00000523483 HERVK_113P61574 105 aa6.3□□□□□ -1.4
SDCBP-212ENST00000523483 TINCRA0A1B0GVN0 87 aa6.29□□□□□ -1.4
SDCBP-212ENST00000523483 H3BRM9 83 aa6.29□□□□□ -1.4
SDCBP-212ENST00000523483 MIAQ16674 131 aa6.29□□□□□ -1.4
SDCBP-212ENST00000523483 C10orf126Q8N4M7 172 aa6.29□□□□□ -1.4
SDCBP-212ENST00000523483 IGLC3P0DOY3 106 aa6.29□□□□□ -1.4
SDCBP-212ENST00000523483 UPK3BQ9BT76 320 aa6.29□□□□□ -1.4
SDCBP-212ENST00000523483 NPSP0C0P6 89 aa6.29□□□□□ -1.4
SDCBP-212ENST00000523483 LINC00518Q8N0U6 118 aa6.29□□□□□ -1.4
SDCBP-212ENST00000523483 IGKV2D-26A0A0A0MRZ7 120 aa6.28□□□□□ -1.4
SDCBP-212ENST00000523483 COX7A2LO14548 114 aa6.28□□□□□ -1.4
SDCBP-212ENST00000523483 ZNF625Q96I27 306 aaPredicted RBP6.28□□□□□ -1.4
SDCBP-212ENST00000523483 PRR34Q9NV39 138 aa6.28□□□□□ -1.4
SDCBP-212ENST00000523483 NBDYA0A0U1RRE5 68 aa6.28□□□□□ -1.4
SDCBP-212ENST00000523483 HIGD2BQ4VC39 106 aa6.28□□□□□ -1.4
SDCBP-212ENST00000523483 CD164L2Q6UWJ8 174 aa6.28□□□□□ -1.4
SDCBP-212ENST00000523483 NFE4Q86UQ8 179 aa6.28□□□□□ -1.4
SDCBP-212ENST00000523483 PCP2Q8IVA1 136 aa6.27□□□□□ -1.41
SDCBP-212ENST00000523483 IGHV3OR16-9A0A0B4J2B5 98 aa6.27□□□□□ -1.41
SDCBP-212ENST00000523483 A0A0U1RRA0 63 aa6.27□□□□□ -1.41
SDCBP-212ENST00000523483 LGALS3P17931 250 aaKnown RBP6.27□□□□□ -1.41
SDCBP-212ENST00000523483 LINC00476Q8WZB0 136 aa6.27□□□□□ -1.41
SDCBP-212ENST00000523483 IBA57-AS1B1ANH7 110 aa6.27□□□□□ -1.41
SDCBP-212ENST00000523483 ORAOV1Q8WV07 137 aa6.27□□□□□ -1.41
SDCBP-212ENST00000523483 TRAV8-4A0A0B4J246 113 aa6.26□□□□□ -1.41
SDCBP-212ENST00000523483 PRSS2P07478 247 aa6.26□□□□□ -1.41
SDCBP-212ENST00000523483 TMEM223A0PJW6 202 aa6.26□□□□□ -1.41
SDCBP-212ENST00000523483 C6orf226Q5I0X4 101 aa6.26□□□□□ -1.41
SDCBP-212ENST00000523483 TTC32Q5I0X7 151 aa6.26□□□□□ -1.41
SDCBP-212ENST00000523483 SCGB1D4Q6XE38 83 aa6.26□□□□□ -1.41
SDCBP-212ENST00000523483 SMIM1B2RUZ4 78 aa6.25□□□□□ -1.41
SDCBP-212ENST00000523483 ZNF815PA8K554 130 aa6.25□□□□□ -1.41
SDCBP-212ENST00000523483 J3QQQ9 107 aa6.25□□□□□ -1.41
SDCBP-212ENST00000523483 FOXI1Q12951 378 aa6.25□□□□□ -1.41
SDCBP-212ENST00000523483 TSPEAR-AS2P59090 65 aa6.24□□□□□ -1.41
SDCBP-212ENST00000523483 KMT2AQ03164 3969 aa6.24□□□□□ -1.41
SDCBP-212ENST00000523483 RMI2Q96E14 147 aa6.24□□□□□ -1.41
SDCBP-212ENST00000523483 A0A087WZ39 114 aa6.24□□□□□ -1.41
SDCBP-212ENST00000523483 IGHV1-58A0A0C4DH39 117 aa6.24□□□□□ -1.41
SDCBP-212ENST00000523483 TSTD3H0UI37 97 aa6.24□□□□□ -1.41
SDCBP-212ENST00000523483 CFAP161Q6P656 301 aa6.24□□□□□ -1.41
SDCBP-212ENST00000523483 C2orf82Q6UX34 121 aa6.24□□□□□ -1.41
SDCBP-212ENST00000523483 E9PLD3 99 aa6.24□□□□□ -1.41
SDCBP-212ENST00000523483 ZNF561-AS1K7EIQ3 104 aa6.24□□□□□ -1.41
SDCBP-212ENST00000523483 CKS1BP61024 79 aa6.24□□□□□ -1.41
SDCBP-212ENST00000523483 APOMO95445 188 aa6.23□□□□□ -1.41
SDCBP-212ENST00000523483 SPAG11BQ08648 103 aa6.23□□□□□ -1.41
SDCBP-212ENST00000523483 C6orf223Q8N319 242 aa6.23□□□□□ -1.41
SDCBP-212ENST00000523483 NDUFA12Q9UI09 145 aa6.23□□□□□ -1.41
SDCBP-212ENST00000523483 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.23□□□□□ -1.41
SDCBP-212ENST00000523483 MAPKAPK5-AS1Q8N8E1 139 aa6.23□□□□□ -1.41
SDCBP-212ENST00000523483 COX7B2Q8TF08 81 aa6.23□□□□□ -1.41
SDCBP-212ENST00000523483 IGLV5-45A0A087WSX0 123 aa6.22□□□□□ -1.41
SDCBP-212ENST00000523483 SLC25A34Q6PIV7 304 aa6.22□□□□□ -1.41
SDCBP-212ENST00000523483 MEIG1Q5JSS6 88 aa6.22□□□□□ -1.41
SDCBP-212ENST00000523483 PLEKHB2Q96CS7 222 aa6.22□□□□□ -1.41
SDCBP-212ENST00000523483 TM2D2Q9BX73 214 aa6.22□□□□□ -1.41
SDCBP-212ENST00000523483 USP17L23D6RBM5 183 aa6.22□□□□□ -1.41
SDCBP-212ENST00000523483 LEPROTO15243 131 aa6.22□□□□□ -1.41
SDCBP-212ENST00000523483 DYNC2H1Q8NCM8 4307 aaKnown RBP6.21□□□□□ -1.41
SDCBP-212ENST00000523483 PFN2P35080 140 aa6.21□□□□□ -1.41
SDCBP-212ENST00000523483 NPC2P61916 151 aa6.21□□□□□ -1.41
SDCBP-212ENST00000523483 DNAH10Q8IVF4 4471 aa6.21□□□□□ -1.42
SDCBP-212ENST00000523483 DNAH1Q9P2D7 4330 aa6.2□□□□□ -1.42
SDCBP-212ENST00000523483 COX8AP10176 69 aa6.2□□□□□ -1.42
SDCBP-212ENST00000523483 HNRNPA3P51991 378 aaKnown RBP6.2□□□□□ -1.42
SDCBP-212ENST00000523483 DAND5Q8N907 189 aa6.2□□□□□ -1.42
SDCBP-212ENST00000523483 CAMK2N2Q96S95 79 aa6.2□□□□□ -1.42
SDCBP-212ENST00000523483 FUSP35637 526 aaKnown RBP eCLIP6.2□□□□□ -1.42
SDCBP-212ENST00000523483 WFDC2Q14508 124 aa6.2□□□□□ -1.42
SDCBP-212ENST00000523483 C1orf134Q5TEV5 83 aa6.2□□□□□ -1.42
SDCBP-212ENST00000523483 FAM19A3Q7Z5A8 133 aa6.2□□□□□ -1.42
SDCBP-212ENST00000523483 MYMXA0A1B0GTQ4 84 aa6.19□□□□□ -1.42
SDCBP-212ENST00000523483 K7EP13 123 aa6.19□□□□□ -1.42
SDCBP-212ENST00000523483 C9orf116Q5BN46 136 aaPredicted RBP6.19□□□□□ -1.42
SDCBP-212ENST00000523483 UQCR10Q9UDW1 63 aa6.19□□□□□ -1.42
SDCBP-212ENST00000523483 COX11Q9Y6N1 276 aa6.19□□□□□ -1.42
SDCBP-212ENST00000523483 KRTAP26-1Q6PEX3 210 aa6.19□□□□□ -1.42
SDCBP-212ENST00000523483 IGLV5-39A0A0G2JS06 123 aa6.19□□□□□ -1.42
SDCBP-212ENST00000523483 UNQ6190/PRO20217Q6UXQ8 127 aa6.19□□□□□ -1.42
SDCBP-212ENST00000523483 BATFQ16520 125 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms