RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 UNQ6190/PRO20217Q6UXQ8 127 aa12.11□□□□□ -0.47
HDAC2-207ENST00000520170 FAM104AQ969W3 186 aa12.11□□□□□ -0.47
HDAC2-207ENST00000520170 NAT8BQ9UHF3 227 aa12.11□□□□□ -0.47
HDAC2-207ENST00000520170 SRP19P09132 144 aaKnown RBP12.1□□□□□ -0.47
HDAC2-207ENST00000520170 CKS2P33552 79 aa12.1□□□□□ -0.47
HDAC2-207ENST00000520170 GAGE2EQ4V326 116 aa12.1□□□□□ -0.47
HDAC2-207ENST00000520170 C20orf78Q9BR46 151 aa12.1□□□□□ -0.47
HDAC2-207ENST00000520170 GAGE2DQ9UEU5 116 aa12.1□□□□□ -0.47
HDAC2-207ENST00000520170 TMEM241Q24JQ0 296 aa12.09□□□□□ -0.47
HDAC2-207ENST00000520170 C6orf48Q9UBA6 75 aa12.09□□□□□ -0.47
HDAC2-207ENST00000520170 TRBV24-1A0A075B6N3 115 aa12.08□□□□□ -0.48
HDAC2-207ENST00000520170 LINC00862A6NCI5 91 aa12.08□□□□□ -0.48
HDAC2-207ENST00000520170 IFITM10A6NMD0 228 aa12.08□□□□□ -0.48
HDAC2-207ENST00000520170 TLX1NBP0CAT3 122 aa12.08□□□□□ -0.48
HDAC2-207ENST00000520170 SPANXA1Q9NS26 97 aa12.08□□□□□ -0.48
HDAC2-207ENST00000520170 TCAPO15273 167 aa12.07□□□□□ -0.48
HDAC2-207ENST00000520170 TNFRSF6BO95407 300 aa12.07□□□□□ -0.48
HDAC2-207ENST00000520170 FAM74A3Q4VXF1 159 aa12.07□□□□□ -0.48
HDAC2-207ENST00000520170 IGLV1-50A0A075B6I6 118 aa12.06□□□□□ -0.48
HDAC2-207ENST00000520170 RPL32P62910 135 aaKnown RBP12.06□□□□□ -0.48
HDAC2-207ENST00000520170 HBBP68871 147 aa12.06□□□□□ -0.48
HDAC2-207ENST00000520170 SMIM2Q9BVW6 85 aa12.06□□□□□ -0.48
HDAC2-207ENST00000520170 SMDT1Q9H4I9 107 aa12.06□□□□□ -0.48
HDAC2-207ENST00000520170 RPL23P62829 140 aaKnown RBP12.05□□□□□ -0.48
HDAC2-207ENST00000520170 UBE2BP63146 152 aa12.05□□□□□ -0.48
HDAC2-207ENST00000520170 MRPS36P82909 103 aaKnown RBP12.05□□□□□ -0.48
HDAC2-207ENST00000520170 KRTAP7-1Q8IUC3 87 aa12.05□□□□□ -0.48
HDAC2-207ENST00000520170 SMIM27A0A1W2PRY6 76 aa12.04□□□□□ -0.48
HDAC2-207ENST00000520170 M0QXV9 152 aa12.04□□□□□ -0.48
HDAC2-207ENST00000520170 KRTAP1-4P0C5Y4 121 aa12.04□□□□□ -0.48
HDAC2-207ENST00000520170 ADIRFQ15847 76 aa12.04□□□□□ -0.48
HDAC2-207ENST00000520170 AKAP14Q86UN6 197 aa12.04□□□□□ -0.48
HDAC2-207ENST00000520170 TGIF2-C20orf24A0A0A6YYL0 155 aa12.03□□□□□ -0.48
HDAC2-207ENST00000520170 D6R8Y8 96 aa12.03□□□□□ -0.48
HDAC2-207ENST00000520170 UBE2D1P51668 147 aa12.03□□□□□ -0.48
HDAC2-207ENST00000520170 PRR4Q16378 134 aa12.03□□□□□ -0.48
HDAC2-207ENST00000520170 A0A1B0GW15 77 aa12.02□□□□□ -0.49
HDAC2-207ENST00000520170 NPYP01303 97 aa12.02□□□□□ -0.49
HDAC2-207ENST00000520170 KIAA0087Q14695 138 aa12.02□□□□□ -0.49
HDAC2-207ENST00000520170 MRPL54Q6P161 138 aaKnown RBP12□□□□□ -0.49
HDAC2-207ENST00000520170 C2orf82Q6UX34 121 aa12□□□□□ -0.49
HDAC2-207ENST00000520170 F8W036 122 aa11.99□□□□□ -0.49
HDAC2-207ENST00000520170 NAT8Q9UHE5 227 aa11.99□□□□□ -0.49
HDAC2-207ENST00000520170 TRBV30A0A0K0K1B3 111 aa11.98□□□□□ -0.49
HDAC2-207ENST00000520170 NDUFC2-KCTD14E9PQ53 114 aa11.98□□□□□ -0.49
HDAC2-207ENST00000520170 IFI27P40305 119 aaPredicted RBP11.98□□□□□ -0.49
HDAC2-207ENST00000520170 RPL13AP40429 203 aaKnown RBP11.98□□□□□ -0.49
HDAC2-207ENST00000520170 C9orf129Q5T035 196 aaKnown RBP11.98□□□□□ -0.49
HDAC2-207ENST00000520170 LINC00242Q5T6M2 205 aa11.98□□□□□ -0.49
HDAC2-207ENST00000520170 PACRGQ96M98 296 aaPredicted RBP11.98□□□□□ -0.49
HDAC2-207ENST00000520170 hCG_2014768A0A024R1R8 64 aa11.97□□□□□ -0.49
HDAC2-207ENST00000520170 S100A8P05109 93 aa11.97□□□□□ -0.49
HDAC2-207ENST00000520170 RAB5AP20339 215 aa11.97□□□□□ -0.49
HDAC2-207ENST00000520170 IGLV4-3A0A075B6K6 122 aa11.96□□□□□ -0.49
HDAC2-207ENST00000520170 C9JQL5 133 aa11.96□□□□□ -0.49
HDAC2-207ENST00000520170 PPBPP02775 128 aa11.95□□□□□ -0.5
HDAC2-207ENST00000520170 A0A1B0GXF2 115 aa11.94□□□□□ -0.5
HDAC2-207ENST00000520170 TMEM141Q96I45 108 aa11.94□□□□□ -0.5
HDAC2-207ENST00000520170 PYGO1Q9Y3Y4 419 aa11.94□□□□□ -0.5
HDAC2-207ENST00000520170 ORMDL3Q8N138 153 aa11.93□□□□□ -0.5
HDAC2-207ENST00000520170 TEX43Q6ZNM6 134 aa11.92□□□□□ -0.5
HDAC2-207ENST00000520170 TMEM136Q6ZRR5 245 aa11.92□□□□□ -0.5
HDAC2-207ENST00000520170 LINC00469Q8N7U9 141 aa11.92□□□□□ -0.5
HDAC2-207ENST00000520170 PRELID3AQ96N28 172 aa11.92□□□□□ -0.5
HDAC2-207ENST00000520170 CARHSP1Q9Y2V2 147 aaKnown RBP11.92□□□□□ -0.5
HDAC2-207ENST00000520170 MUC2Q02817 5179 aa11.91□□□□□ -0.5
HDAC2-207ENST00000520170 ZNF861PO60384 105 aa11.91□□□□□ -0.5
HDAC2-207ENST00000520170 TSPAN13O95857 204 aa11.91□□□□□ -0.5
HDAC2-207ENST00000520170 PRSS2P07478 247 aa11.91□□□□□ -0.5
HDAC2-207ENST00000520170 SRSF3P84103 164 aaKnown RBP11.91□□□□□ -0.5
HDAC2-207ENST00000520170 ZC2HC1BQ5TFG8 222 aa11.91□□□□□ -0.5
HDAC2-207ENST00000520170 TOMM7Q9P0U1 55 aa11.91□□□□□ -0.5
HDAC2-207ENST00000520170 LOC389332A0A1B0GUA5 103 aa11.9□□□□□ -0.5
HDAC2-207ENST00000520170 C2orf88Q9BSF0 95 aa11.9□□□□□ -0.5
HDAC2-207ENST00000520170 CKS1BP61024 79 aa11.89□□□□□ -0.51
HDAC2-207ENST00000520170 PEA15Q15121 130 aa11.89□□□□□ -0.51
HDAC2-207ENST00000520170 LINC01561Q8N1V8 128 aa11.89□□□□□ -0.51
HDAC2-207ENST00000520170 C22orf24Q9Y442 160 aa11.89□□□□□ -0.51
HDAC2-207ENST00000520170 XAGE1AQ9HD64 81 aa11.88□□□□□ -0.51
HDAC2-207ENST00000520170 NUPR1O60356 82 aa11.87□□□□□ -0.51
HDAC2-207ENST00000520170 C6orf226Q5I0X4 101 aa11.87□□□□□ -0.51
HDAC2-207ENST00000520170 Q6ZN92 141 aa11.87□□□□□ -0.51
HDAC2-207ENST00000520170 CTDSP1Q9GZU7 261 aa11.87□□□□□ -0.51
HDAC2-207ENST00000520170 LBHQ53QV2 105 aaPredicted RBP11.86□□□□□ -0.51
HDAC2-207ENST00000520170 LINC00173Q6ZV60 143 aa11.86□□□□□ -0.51
HDAC2-207ENST00000520170 VCX2Q9H322 139 aa11.86□□□□□ -0.51
HDAC2-207ENST00000520170 A0A0U1RQV1 116 aa11.85□□□□□ -0.51
HDAC2-207ENST00000520170 ATP5L2Q7Z4Y8 100 aa11.85□□□□□ -0.51
HDAC2-207ENST00000520170 ALKBH7Q9BT30 221 aaPredicted RBP11.85□□□□□ -0.51
HDAC2-207ENST00000520170 MAP1LC3AQ9H492 121 aa11.85□□□□□ -0.51
HDAC2-207ENST00000520170 CYSLTR1Q9Y271 337 aa11.85□□□□□ -0.51
HDAC2-207ENST00000520170 PRSS47A8MTI9 375 aa11.84□□□□□ -0.51
HDAC2-207ENST00000520170 C2orf66Q6UXQ4 117 aa11.84□□□□□ -0.51
HDAC2-207ENST00000520170 AMELXQ99217 191 aa11.84□□□□□ -0.51
HDAC2-207ENST00000520170 Q8IZM0 81 aa11.83□□□□□ -0.52
HDAC2-207ENST00000520170 A0A087X002 238 aa11.82□□□□□ -0.52
HDAC2-207ENST00000520170 Q8N8P6 123 aa11.82□□□□□ -0.52
HDAC2-207ENST00000520170 LAMTOR2Q9Y2Q5 125 aa11.81□□□□□ -0.52
HDAC2-207ENST00000520170 RPL28P46779 137 aaKnown RBP11.8□□□□□ -0.52
HDAC2-207ENST00000520170 MRPL55Q7Z7F7 128 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms