RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 RNASE7Q9H1E1 156 aaKnown RBP2.29□□□□□ -2.04
HMGB1P23-201ENST00000518743 CYSLTR1Q9Y271 337 aa2.29□□□□□ -2.04
HMGB1P23-201ENST00000518743 H3BT86 120 aa2.28□□□□□ -2.04
HMGB1P23-201ENST00000518743 OR10J4P0C629 311 aa2.28□□□□□ -2.04
HMGB1P23-201ENST00000518743 COX6A2Q02221 97 aa2.28□□□□□ -2.04
HMGB1P23-201ENST00000518743 TRIQKQ629K1 86 aa2.28□□□□□ -2.04
HMGB1P23-201ENST00000518743 S100A7AQ86SG5 101 aa2.28□□□□□ -2.04
HMGB1P23-201ENST00000518743 C12orf45Q8N5I9 185 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P23-201ENST00000518743 OR10J5Q8NHC4 309 aa2.28□□□□□ -2.04
HMGB1P23-201ENST00000518743 GINS4Q9BRT9 223 aa2.28□□□□□ -2.04
HMGB1P23-201ENST00000518743 IMUPQ9GZP8 106 aa2.28□□□□□ -2.04
HMGB1P23-201ENST00000518743 VCX3BQ9H321 246 aa2.28□□□□□ -2.04
HMGB1P23-201ENST00000518743 OBSCNQ5VST9 7968 aa2.27□□□□□ -2.05
HMGB1P23-201ENST00000518743 TRBV19A0A075B6N1 114 aa2.27□□□□□ -2.05
HMGB1P23-201ENST00000518743 TRBV10-2A0A0K0K1G8 114 aa2.27□□□□□ -2.05
HMGB1P23-201ENST00000518743 NDUFC2O95298 119 aa2.27□□□□□ -2.05
HMGB1P23-201ENST00000518743 TCL1BO95988 128 aa2.27□□□□□ -2.05
HMGB1P23-201ENST00000518743 IGKV1-5P01602 117 aa2.27□□□□□ -2.05
HMGB1P23-201ENST00000518743 CRPP02741 224 aa2.27□□□□□ -2.05
HMGB1P23-201ENST00000518743 G6PCP35575 357 aa2.27□□□□□ -2.05
HMGB1P23-201ENST00000518743 PPP3R1P63098 170 aa2.27□□□□□ -2.05
HMGB1P23-201ENST00000518743 EIF5AP63241 154 aaKnown RBP2.27□□□□□ -2.05
HMGB1P23-201ENST00000518743 SCGB2B2Q4G0G5 96 aa2.27□□□□□ -2.05
HMGB1P23-201ENST00000518743 AKR1C8PQ5T2L2 129 aa2.27□□□□□ -2.05
HMGB1P23-201ENST00000518743 MIR17HGQ75NE6 70 aa2.27□□□□□ -2.05
HMGB1P23-201ENST00000518743 C6orf201Q7Z4U5 140 aa2.27□□□□□ -2.05
HMGB1P23-201ENST00000518743 OR8J3Q8NGG0 315 aa2.27□□□□□ -2.05
HMGB1P23-201ENST00000518743 GID8Q9NWU2 228 aa2.27□□□□□ -2.05
HMGB1P23-201ENST00000518743 BET1LQ9NYM9 111 aa2.27□□□□□ -2.05
HMGB1P23-201ENST00000518743 TAS2R4Q9NYW5 299 aa2.27□□□□□ -2.05
HMGB1P23-201ENST00000518743 SDHAF1A6NFY7 115 aa2.26□□□□□ -2.05
HMGB1P23-201ENST00000518743 A8MTW9 85 aa2.26□□□□□ -2.05
HMGB1P23-201ENST00000518743 G3V2T6 193 aa2.26□□□□□ -2.05
HMGB1P23-201ENST00000518743 HMGB3O15347 200 aaKnown RBP2.26□□□□□ -2.05
HMGB1P23-201ENST00000518743 SHBGP04278 402 aa2.26□□□□□ -2.05
HMGB1P23-201ENST00000518743 RPSAP08865 295 aaKnown RBP2.26□□□□□ -2.05
HMGB1P23-201ENST00000518743 OR4E1P0C645 316 aa2.26□□□□□ -2.05
HMGB1P23-201ENST00000518743 ZNF80P51504 273 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P23-201ENST00000518743 GLIPR1L1Q6UWM5 242 aa2.26□□□□□ -2.05
HMGB1P23-201ENST00000518743 PBDC1Q9BVG4 233 aa2.26□□□□□ -2.05
HMGB1P23-201ENST00000518743 BIN3Q9NQY0 253 aa2.26□□□□□ -2.05
HMGB1P23-201ENST00000518743 LYRM2Q9NU23 88 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P23-201ENST00000518743 TRAV12-3A0A0B4J271 114 aa2.25□□□□□ -2.05
HMGB1P23-201ENST00000518743 J3QRE1 110 aa2.25□□□□□ -2.05
HMGB1P23-201ENST00000518743 SPINK4O60575 86 aa2.25□□□□□ -2.05
HMGB1P23-201ENST00000518743 PFDN1O60925 122 aa2.25□□□□□ -2.05
HMGB1P23-201ENST00000518743 HMGN1P05114 100 aa2.25□□□□□ -2.05
HMGB1P23-201ENST00000518743 KRTAP10-10P60014 251 aa2.25□□□□□ -2.05
HMGB1P23-201ENST00000518743 Q0VG73 95 aa2.25□□□□□ -2.05
HMGB1P23-201ENST00000518743 WHAMMP3Q1A5X7 153 aa2.25□□□□□ -2.05
HMGB1P23-201ENST00000518743 KTN1-AS1Q86SY8 53 aa2.25□□□□□ -2.05
HMGB1P23-201ENST00000518743 HIST3H2BBQ8N257 126 aa2.25□□□□□ -2.05
HMGB1P23-201ENST00000518743 SH3BGRL3Q9H299 93 aa2.25□□□□□ -2.05
HMGB1P23-201ENST00000518743 TMEM138Q9NPI0 162 aa2.25□□□□□ -2.05
HMGB1P23-201ENST00000518743 C8orf4Q9NR00 106 aa2.25□□□□□ -2.05
HMGB1P23-201ENST00000518743 TAS2R8Q9NYW2 309 aa2.25□□□□□ -2.05
HMGB1P23-201ENST00000518743 PRO2289Q9P1D8 64 aa2.25□□□□□ -2.05
HMGB1P23-201ENST00000518743 CKLFQ9UBR5 152 aa2.25□□□□□ -2.05
HMGB1P23-201ENST00000518743 A0A087WX48 190 aa2.24□□□□□ -2.05
HMGB1P23-201ENST00000518743 TRAV4A0A0B4J268 109 aa2.24□□□□□ -2.05
HMGB1P23-201ENST00000518743 HMSDA8MTL9 139 aa2.24□□□□□ -2.05
HMGB1P23-201ENST00000518743 FAM107AO95990 144 aa2.24□□□□□ -2.05
HMGB1P23-201ENST00000518743 CD2P06729 351 aa2.24□□□□□ -2.05
HMGB1P23-201ENST00000518743 SMIM17P0DL12 118 aa2.24□□□□□ -2.05
HMGB1P23-201ENST00000518743 SPRR2EP22531 72 aa2.24□□□□□ -2.05
HMGB1P23-201ENST00000518743 SPRR2BP35325 72 aa2.24□□□□□ -2.05
HMGB1P23-201ENST00000518743 SPRR2AP35326 72 aa2.24□□□□□ -2.05
HMGB1P23-201ENST00000518743 DEFA1P59665 94 aa2.24□□□□□ -2.05
HMGB1P23-201ENST00000518743 GNG11P61952 73 aa2.24□□□□□ -2.05
HMGB1P23-201ENST00000518743 ELOBQ15370 118 aa2.24□□□□□ -2.05
HMGB1P23-201ENST00000518743 LCE3AQ5TA76 89 aa2.24□□□□□ -2.05
HMGB1P23-201ENST00000518743 OR8I2Q8N0Y5 310 aa2.24□□□□□ -2.05
HMGB1P23-201ENST00000518743 TERB2Q8NHR7 220 aa2.24□□□□□ -2.05
HMGB1P23-201ENST00000518743 DNAJC9Q8WXX5 260 aa2.24□□□□□ -2.05
HMGB1P23-201ENST00000518743 TSC22D3Q99576 134 aa2.24□□□□□ -2.05
HMGB1P23-201ENST00000518743 MIXL1Q9H2W2 232 aa2.24□□□□□ -2.05
HMGB1P23-201ENST00000518743 NDUFA4L2Q9NRX3 87 aa2.24□□□□□ -2.05
HMGB1P23-201ENST00000518743 NHP2Q9NX24 153 aaKnown RBP2.24□□□□□ -2.05
HMGB1P23-201ENST00000518743 SSR3Q9UNL2 185 aa2.24□□□□□ -2.05
HMGB1P23-201ENST00000518743 A0A096LNI7 61 aa2.23□□□□□ -2.05
HMGB1P23-201ENST00000518743 CRYM-AS1A6NIL9 109 aa2.23□□□□□ -2.05
HMGB1P23-201ENST00000518743 F8W036 122 aa2.23□□□□□ -2.05
HMGB1P23-201ENST00000518743 J3QQQ9 107 aa2.23□□□□□ -2.05
HMGB1P23-201ENST00000518743 SNAPC5O75971 98 aa2.23□□□□□ -2.05
HMGB1P23-201ENST00000518743 FABP1P07148 127 aa2.23□□□□□ -2.05
HMGB1P23-201ENST00000518743 S100A1P23297 94 aa2.23□□□□□ -2.05
HMGB1P23-201ENST00000518743 G0S2P27469 103 aa2.23□□□□□ -2.05
HMGB1P23-201ENST00000518743 LCA10Q71F78 164 aa2.23□□□□□ -2.05
HMGB1P23-201ENST00000518743 LINC00474Q9P2X8 69 aa2.23□□□□□ -2.05
HMGB1P23-201ENST00000518743 PRNDQ9UKY0 176 aa2.23□□□□□ -2.05
HMGB1P23-201ENST00000518743 PAIP2BQ9ULR5 123 aaKnown RBP2.23□□□□□ -2.05
HMGB1P23-201ENST00000518743 TRAV30A0A087WSZ9 112 aa2.22□□□□□ -2.05
HMGB1P23-201ENST00000518743 TMSB15BA0A087X1C1 80 aa2.22□□□□□ -2.05
HMGB1P23-201ENST00000518743 MEIS3P1A6NDR6 274 aa2.22□□□□□ -2.05
HMGB1P23-201ENST00000518743 PPBPP02775 128 aa2.22□□□□□ -2.05
HMGB1P23-201ENST00000518743 SNCAP37840 140 aa2.22□□□□□ -2.05
HMGB1P23-201ENST00000518743 PIGPP57054 158 aa2.22□□□□□ -2.05
HMGB1P23-201ENST00000518743 PCOTHQ58A44 107 aa2.22□□□□□ -2.05
HMGB1P23-201ENST00000518743 Q8NDZ9 215 aa2.22□□□□□ -2.05
HMGB1P23-201ENST00000518743 OR5AK2Q8NH90 309 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms