RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 PAPPA-AS1Q5QFB9 102 aa14.19□□□□□ -0.14
VEGFA-217ENST00000518538 C5orf38Q86SI9 138 aa14.19□□□□□ -0.14
VEGFA-217ENST00000518538 Q8N1X5 172 aa14.19□□□□□ -0.14
VEGFA-217ENST00000518538 UBE2D1P51668 147 aa14.18□□□□□ -0.14
VEGFA-217ENST00000518538 ERASQ7Z444 233 aa14.18□□□□□ -0.14
VEGFA-217ENST00000518538 SCGB3A1Q96QR1 104 aa14.18□□□□□ -0.14
VEGFA-217ENST00000518538 KRTAP17-1Q9BYP8 105 aa14.18□□□□□ -0.14
VEGFA-217ENST00000518538 APOMO95445 188 aa14.17□□□□□ -0.14
VEGFA-217ENST00000518538 LINC00242Q5T6M2 205 aa14.17□□□□□ -0.14
VEGFA-217ENST00000518538 IGHV3-64A0A075B6Q5 118 aa14.16□□□□□ -0.14
VEGFA-217ENST00000518538 ZNF561-AS1K7EIQ3 104 aa14.16□□□□□ -0.14
VEGFA-217ENST00000518538 LINC00614P0C842 121 aa14.16□□□□□ -0.14
VEGFA-217ENST00000518538 ZC2HC1BQ5TFG8 222 aa14.16□□□□□ -0.14
VEGFA-217ENST00000518538 SDIM1Q6ZPB5 146 aa14.16□□□□□ -0.14
VEGFA-217ENST00000518538 URB1-AS1Q96HZ7 61 aa14.16□□□□□ -0.14
VEGFA-217ENST00000518538 RAB5BP61020 215 aa14.14□□□□□ -0.15
VEGFA-217ENST00000518538 LINC00526Q96FQ7 95 aa14.14□□□□□ -0.15
VEGFA-217ENST00000518538 CHAC1Q9BUX1 264 aa14.14□□□□□ -0.15
VEGFA-217ENST00000518538 COX6A2Q02221 97 aa14.13□□□□□ -0.15
VEGFA-217ENST00000518538 SCXQ7RTU7 201 aa14.12□□□□□ -0.15
VEGFA-217ENST00000518538 FAM19A3Q7Z5A8 133 aa14.12□□□□□ -0.15
VEGFA-217ENST00000518538 OR10D4PQ8NGN7 298 aa14.12□□□□□ -0.15
VEGFA-217ENST00000518538 IGLV4-69A0A075B6H9 119 aa14.11□□□□□ -0.15
VEGFA-217ENST00000518538 A0A087WZ39 114 aa14.11□□□□□ -0.15
VEGFA-217ENST00000518538 A0A096LNJ9 63 aa14.11□□□□□ -0.15
VEGFA-217ENST00000518538 CARD19Q96LW7 228 aa14.11□□□□□ -0.15
VEGFA-217ENST00000518538 SMR3BP02814 79 aaPredicted RBP14.1□□□□□ -0.15
VEGFA-217ENST00000518538 SEC11AP67812 179 aa14.1□□□□□ -0.15
VEGFA-217ENST00000518538 SPAG11BQ08648 103 aa14.1□□□□□ -0.15
VEGFA-217ENST00000518538 SYCNQ0VAF6 134 aa14.1□□□□□ -0.15
VEGFA-217ENST00000518538 ORAOV1Q8WV07 137 aa14.1□□□□□ -0.15
VEGFA-217ENST00000518538 KRTAP4-5Q9BYR2 181 aa14.1□□□□□ -0.15
VEGFA-217ENST00000518538 COLCA2A8K830 154 aa14.09□□□□□ -0.15
VEGFA-217ENST00000518538 HBDP02042 147 aa14.09□□□□□ -0.15
VEGFA-217ENST00000518538 TRGC2P03986 189 aa14.09□□□□□ -0.15
VEGFA-217ENST00000518538 CIRBP-AS1Q8TBR5 109 aa14.09□□□□□ -0.15
VEGFA-217ENST00000518538 C2orf48Q96LS8 159 aa14.09□□□□□ -0.15
VEGFA-217ENST00000518538 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.09□□□□□ -0.15
VEGFA-217ENST00000518538 LINC01561Q8N1V8 128 aa14.08□□□□□ -0.16
VEGFA-217ENST00000518538 DNAH8Q96JB1 4490 aa14.07□□□□□ -0.16
VEGFA-217ENST00000518538 EPM2AB3EWF7 344 aa14.07□□□□□ -0.16
VEGFA-217ENST00000518538 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.07□□□□□ -0.16
VEGFA-217ENST00000518538 HERVK_113P63121 156 aa14.07□□□□□ -0.16
VEGFA-217ENST00000518538 CIRBPQ14011 172 aaKnown RBP14.07□□□□□ -0.16
VEGFA-217ENST00000518538 PMCHL1Q16048 86 aa14.07□□□□□ -0.16
VEGFA-217ENST00000518538 CHCHD1Q96BP2 118 aaKnown RBP14.07□□□□□ -0.16
VEGFA-217ENST00000518538 CAMK2N2Q96S95 79 aa14.07□□□□□ -0.16
VEGFA-217ENST00000518538 PANO1I0J062 215 aa14.06□□□□□ -0.16
VEGFA-217ENST00000518538 Q6ZRU5 148 aa14.06□□□□□ -0.16
VEGFA-217ENST00000518538 CST9LQ9H4G1 147 aa14.06□□□□□ -0.16
VEGFA-217ENST00000518538 PKIGQ9Y2B9 76 aa14.06□□□□□ -0.16
VEGFA-217ENST00000518538 F8WDY8 70 aa14.05□□□□□ -0.16
VEGFA-217ENST00000518538 PMVKQ15126 192 aa14.05□□□□□ -0.16
VEGFA-217ENST00000518538 Q5VSD8 79 aa14.05□□□□□ -0.16
VEGFA-217ENST00000518538 GEMIN7Q9H840 131 aaKnown RBP14.05□□□□□ -0.16
VEGFA-217ENST00000518538 A0A0J9YXV3 536 aa14.04□□□□□ -0.16
VEGFA-217ENST00000518538 PDZD11Q5EBL8 140 aa14.04□□□□□ -0.16
VEGFA-217ENST00000518538 FAM229AH3BQW9 127 aa14.03□□□□□ -0.16
VEGFA-217ENST00000518538 SCO1O75880 301 aa14.03□□□□□ -0.16
VEGFA-217ENST00000518538 CHTF8P0CG12 524 aa14.03□□□□□ -0.16
VEGFA-217ENST00000518538 SPACA4Q8TDM5 124 aa14.03□□□□□ -0.16
VEGFA-217ENST00000518538 TINCRA0A1B0GVN0 87 aa14.02□□□□□ -0.17
VEGFA-217ENST00000518538 CDKN2A-AS1Q9UH64 79 aa14.02□□□□□ -0.17
VEGFA-217ENST00000518538 ATP5LO75964 103 aa14.01□□□□□ -0.17
VEGFA-217ENST00000518538 KIAA0087Q14695 138 aa14.01□□□□□ -0.17
VEGFA-217ENST00000518538 BAGE3Q86Y29 109 aa14.01□□□□□ -0.17
VEGFA-217ENST00000518538 NDUFA1O15239 70 aa14□□□□□ -0.17
VEGFA-217ENST00000518538 LINC00528Q8N1L1 170 aa14□□□□□ -0.17
VEGFA-217ENST00000518538 MRPL35Q9NZE8 188 aaKnown RBP14□□□□□ -0.17
VEGFA-217ENST00000518538 A0A096LNI7 61 aa13.99□□□□□ -0.17
VEGFA-217ENST00000518538 IGKV2-24A0A0C4DH68 120 aa13.99□□□□□ -0.17
VEGFA-217ENST00000518538 RNF151Q2KHN1 245 aa13.99□□□□□ -0.17
VEGFA-217ENST00000518538 LINC00469Q8N7U9 141 aa13.99□□□□□ -0.17
VEGFA-217ENST00000518538 DPH3Q96FX2 82 aa13.99□□□□□ -0.17
VEGFA-217ENST00000518538 PACRGQ96M98 296 aaPredicted RBP13.99□□□□□ -0.17
VEGFA-217ENST00000518538 IGLV5-45A0A087WSX0 123 aa13.98□□□□□ -0.17
VEGFA-217ENST00000518538 LOC107984640A0A0U1RRK4 108 aa13.98□□□□□ -0.17
VEGFA-217ENST00000518538 LINC00474Q9P2X8 69 aa13.98□□□□□ -0.17
VEGFA-217ENST00000518538 A0A087WYN8 130 aa13.97□□□□□ -0.17
VEGFA-217ENST00000518538 HSBP1O75506 76 aa13.97□□□□□ -0.17
VEGFA-217ENST00000518538 NDUFA6P56556 154 aa13.97□□□□□ -0.17
VEGFA-217ENST00000518538 MAJINQ3KP22 176 aa13.97□□□□□ -0.17
VEGFA-217ENST00000518538 PRSS2P07478 247 aa13.96□□□□□ -0.17
VEGFA-217ENST00000518538 C10orf25Q5T742 122 aa13.96□□□□□ -0.17
VEGFA-217ENST00000518538 UNQ6190/PRO20217Q6UXQ8 127 aa13.96□□□□□ -0.17
VEGFA-217ENST00000518538 IGLC3P0DOY3 106 aa13.95□□□□□ -0.18
VEGFA-217ENST00000518538 Q8IZM0 81 aa13.95□□□□□ -0.18
VEGFA-217ENST00000518538 PLAC8Q9NZF1 115 aa13.95□□□□□ -0.18
VEGFA-217ENST00000518538 TOMM7Q9P0U1 55 aa13.95□□□□□ -0.18
VEGFA-217ENST00000518538 SERF1AO75920 110 aa13.94□□□□□ -0.18
VEGFA-217ENST00000518538 PLA2G1BP04054 148 aaKnown RBP13.94□□□□□ -0.18
VEGFA-217ENST00000518538 PTTG1IPP53801 180 aa13.94□□□□□ -0.18
VEGFA-217ENST00000518538 FAT1Q14517 4588 aa13.94□□□□□ -0.18
VEGFA-217ENST00000518538 C6orf48Q9UBA6 75 aa13.94□□□□□ -0.18
VEGFA-217ENST00000518538 SMIM1B2RUZ4 78 aa13.93□□□□□ -0.18
VEGFA-217ENST00000518538 LINC00310P59036 64 aa13.93□□□□□ -0.18
VEGFA-217ENST00000518538 C2orf82Q6UX34 121 aa13.93□□□□□ -0.18
VEGFA-217ENST00000518538 FAM19A2Q8N3H0 131 aa13.93□□□□□ -0.18
VEGFA-217ENST00000518538 TRBV30A0A0K0K1B3 111 aa13.92□□□□□ -0.18
VEGFA-217ENST00000518538 GAGE2BQ13066 116 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms