RNA–Protein interactions for RNA: ENST00000516675.1

RN7SKP49-201, Transcript of RNA, 7SK small nuclear pseudogene 49, humanhuman

BASIC

Gene RN7SKP49, Length 260 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP49-201ENST00000516675 SCIMPQ6UWF3 145 aa0.43□□□□□ -2.34
RN7SKP49-201ENST00000516675 CASC2Q6XLA1 102 aa0.43□□□□□ -2.34
RN7SKP49-201ENST00000516675 LINC00305Q7Z4B0 112 aa0.43□□□□□ -2.34
RN7SKP49-201ENST00000516675 ARPINQ7Z6K5 226 aa0.43□□□□□ -2.34
RN7SKP49-201ENST00000516675 OR5AS1Q8N127 324 aa0.43□□□□□ -2.34
RN7SKP49-201ENST00000516675 EXOC3-AS1Q8N2X6 119 aa0.43□□□□□ -2.34
RN7SKP49-201ENST00000516675 OR10AC1Q8NH08 325 aa0.43□□□□□ -2.34
RN7SKP49-201ENST00000516675 LZICQ8WZA0 190 aa0.43□□□□□ -2.34
RN7SKP49-201ENST00000516675 PLEKHB2Q96CS7 222 aa0.43□□□□□ -2.34
RN7SKP49-201ENST00000516675 LINC00526Q96FQ7 95 aa0.43□□□□□ -2.34
RN7SKP49-201ENST00000516675 PRELID3AQ96N28 172 aa0.43□□□□□ -2.34
RN7SKP49-201ENST00000516675 LINC00052Q96N35 136 aa0.43□□□□□ -2.34
RN7SKP49-201ENST00000516675 MCEEQ96PE7 176 aa0.43□□□□□ -2.34
RN7SKP49-201ENST00000516675 OR4C12Q96R67 309 aa0.43□□□□□ -2.34
RN7SKP49-201ENST00000516675 AMELYQ99218 206 aa0.43□□□□□ -2.34
RN7SKP49-201ENST00000516675 PRRT1Q99946 306 aa0.43□□□□□ -2.34
RN7SKP49-201ENST00000516675 AIF1LQ9BQI0 150 aa0.43□□□□□ -2.34
RN7SKP49-201ENST00000516675 CST11Q9H112 138 aa0.43□□□□□ -2.34
RN7SKP49-201ENST00000516675 KAAG1Q9UBP8 84 aa0.43□□□□□ -2.34
RN7SKP49-201ENST00000516675 NAT8BQ9UHF3 227 aa0.43□□□□□ -2.34
RN7SKP49-201ENST00000516675 TRAPPC2LQ9UL33 140 aa0.43□□□□□ -2.34
RN7SKP49-201ENST00000516675 RNF11Q9Y3C5 154 aa0.43□□□□□ -2.34
RN7SKP49-201ENST00000516675 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.42□□□□□ -2.34
RN7SKP49-201ENST00000516675 LOC107986453A0A1B0GWG9 222 aa0.42□□□□□ -2.34
RN7SKP49-201ENST00000516675 TRDV1A0A1B0GX56 115 aa0.42□□□□□ -2.34
RN7SKP49-201ENST00000516675 GNG14A0A1W2PPG7 69 aa0.42□□□□□ -2.34
RN7SKP49-201ENST00000516675 C9orf170A2RU37 121 aa0.42□□□□□ -2.34
RN7SKP49-201ENST00000516675 E7EUB6 86 aa0.42□□□□□ -2.34
RN7SKP49-201ENST00000516675 JMJD7-PLA2G4BH0Y9G9 81 aa0.42□□□□□ -2.34
RN7SKP49-201ENST00000516675 H0YJX3 145 aa0.42□□□□□ -2.34
RN7SKP49-201ENST00000516675 CCL25O15444 150 aa0.42□□□□□ -2.34
RN7SKP49-201ENST00000516675 TRACP01848 142 aa0.42□□□□□ -2.34
RN7SKP49-201ENST00000516675 BCL2P10415 239 aa0.42□□□□□ -2.34
RN7SKP49-201ENST00000516675 RPL37AP61513 92 aaKnown RBP0.42□□□□□ -2.34
RN7SKP49-201ENST00000516675 SNRPD3P62318 126 aaKnown RBP0.42□□□□□ -2.34
RN7SKP49-201ENST00000516675 PSG9Q00887 426 aa0.42□□□□□ -2.34
RN7SKP49-201ENST00000516675 SPATA45Q537H7 98 aa0.42□□□□□ -2.34
RN7SKP49-201ENST00000516675 TMEM14EPQ6UXP3 125 aa0.42□□□□□ -2.34
RN7SKP49-201ENST00000516675 Q86TA4 180 aa0.42□□□□□ -2.34
RN7SKP49-201ENST00000516675 Q8IYB0 196 aa0.42□□□□□ -2.34
RN7SKP49-201ENST00000516675 C5orf17Q8NAS9 161 aa0.42□□□□□ -2.34
RN7SKP49-201ENST00000516675 NUP35Q8NFH5 326 aa0.42□□□□□ -2.34
RN7SKP49-201ENST00000516675 OR10AG1Q8NH19 301 aa0.42□□□□□ -2.34
RN7SKP49-201ENST00000516675 BRK1Q8WUW1 75 aa0.42□□□□□ -2.34
RN7SKP49-201ENST00000516675 ANP32BQ92688 251 aaKnown RBP0.42□□□□□ -2.34
RN7SKP49-201ENST00000516675 SMIM7Q9BQ49 75 aa0.42□□□□□ -2.34
RN7SKP49-201ENST00000516675 WFDC6Q9BQY6 131 aa0.42□□□□□ -2.34
RN7SKP49-201ENST00000516675 HSPB8Q9UJY1 196 aa0.42□□□□□ -2.34
RN7SKP49-201ENST00000516675 HSPB11Q9Y547 144 aa0.42□□□□□ -2.34
RN7SKP49-201ENST00000516675 NUBP2Q9Y5Y2 271 aa0.42□□□□□ -2.34
RN7SKP49-201ENST00000516675 TRAV13-1A0A0B4J241 112 aa0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 PRORSD1PA6NEY8 169 aa0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 M0QZK8 103 aa0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 INE1O15225 51 aa0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 NUPR1O60356 82 aa0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 EDF1O60869 148 aaKnown RBP0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 IGLV3-1P01715 115 aa0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 RPS3P23396 243 aaKnown RBP eCLIP0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 SDC4P31431 198 aa0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 CKS2P33552 79 aa0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 ETV6P41212 452 aa0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 SRP9P49458 86 aaKnown RBP0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 GTF2A1P52655 376 aaPredicted RBP0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 ROMO1P60602 79 aa0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 PCBD1P61457 104 aa0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 PSPHP78330 225 aa0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 DR1Q01658 176 aa0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 TMEM128Q5BJH2 165 aa0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 UNQ5815/PRO19632Q6UWF5 114 aa0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 GLIPR1L1Q6UWM5 242 aa0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 LINC00299Q6ZSB3 139 aa0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 ZNF833PQ6ZTB9 187 aa0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 PRR15Q8IV56 129 aa0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 CTAGE3PQ8IX95 158 aa0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 OR8I2Q8N0Y5 310 aa0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 C10orf111Q8N326 155 aa0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 OR8J3Q8NGG0 315 aa0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 Q8TAT8 98 aa0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 CLEC2BQ92478 149 aa0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 GAFA1Q96PS6 74 aa0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 LINC00470Q9BZP3 86 aa0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 C19orf12Q9NSK7 152 aa0.41□□□□□ -2.34
RN7SKP49-201ENST00000516675 LOC110117498A0A087WWA1 95 aa0.4□□□□□ -2.35
RN7SKP49-201ENST00000516675 DEFB131BA0A096LNP1 70 aa0.4□□□□□ -2.35
RN7SKP49-201ENST00000516675 UQCRHLA0A096LP55 91 aa0.4□□□□□ -2.35
RN7SKP49-201ENST00000516675 BORCS7-ASMTA0A0B4J1R7 106 aa0.4□□□□□ -2.35
RN7SKP49-201ENST00000516675 PVALEFA0A1B0GWK0 134 aa0.4□□□□□ -2.35
RN7SKP49-201ENST00000516675 A0A1W2PPM0 123 aa0.4□□□□□ -2.35
RN7SKP49-201ENST00000516675 A0A1W2PRE2 83 aa0.4□□□□□ -2.35
RN7SKP49-201ENST00000516675 G3V318 75 aa0.4□□□□□ -2.35
RN7SKP49-201ENST00000516675 H3BMG7 143 aa0.4□□□□□ -2.35
RN7SKP49-201ENST00000516675 J3KT08 172 aa0.4□□□□□ -2.35
RN7SKP49-201ENST00000516675 M0R1W7 72 aa0.4□□□□□ -2.35
RN7SKP49-201ENST00000516675 FXYD1O00168 92 aa0.4□□□□□ -2.35
RN7SKP49-201ENST00000516675 SMIM24O75264 130 aa0.4□□□□□ -2.35
RN7SKP49-201ENST00000516675 DPM2O94777 84 aa0.4□□□□□ -2.35
RN7SKP49-201ENST00000516675 APOC1P02654 83 aa0.4□□□□□ -2.35
RN7SKP49-201ENST00000516675 SAA1P0DJI8 122 aaPredicted RBP0.4□□□□□ -2.35
RN7SKP49-201ENST00000516675 IL7P13232 177 aa0.4□□□□□ -2.35
RN7SKP49-201ENST00000516675 HIST1H1BP16401 226 aaKnown RBP0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms