RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 LTC4SQ16873 150 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 C10orf128Q5T292 105 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 Q6AWC8 147 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 DHRS4L2Q6PKH6 230 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 WFDC13Q8IUB5 93 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 TCTE3Q8IZS6 198 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 MRPL34Q9BQ48 92 aaKnown RBP-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 PSMG3Q9BT73 122 aaPredicted RBP-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 CCDC32Q9BV29 185 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 SEC11CQ9BY50 192 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 BANF2Q9H503 90 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 TRAPPC2LQ9UL33 140 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 ATP6V1DQ9Y5K8 247 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 LENEPQ9Y5L5 61 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 S4R3F8 94 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 V9GYQ6 96 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 UTP20O75691 2785 aaKnown RBP-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 CHD1O14646 1710 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 CDC42BPAQ5VT25 1732 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 ERCC6Q03468 1493 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 AKAP13Q12802 2813 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 NBEAQ8NFP9 2946 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 DNAH7Q8WXX0 4024 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 DNAH1Q9P2D7 4330 aa-0.62□□□□□ -2.51
RNU4-49P-201ENST00000516080 DSPP15924 2871 aaKnown RBP-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 PPIP5K1Q6PFW1 1433 aa-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 MAP3K1Q13233 1512 aa-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 NESP48681 1621 aa-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 FOCADQ5VW36 1801 aa-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 WDR87Q6ZQQ6 2873 aa-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 CLPSL1A2RUU4 121 aa-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 H7BZZ5 65 aa-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 NIPSNAP2O75323 286 aa-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 SIX6O95475 246 aa-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 IFNA1P01562 189 aa-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 IL5P05113 134 aa-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 HIST1H1DP16402 221 aaKnown RBP-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 CBLN1P23435 193 aa-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 RPL22P35268 128 aaKnown RBP-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 SNCAP37840 140 aa-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 UBE2G1P62253 170 aa-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 MT1XP80297 61 aa-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 LINC01545Q5VT33 79 aa-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 C10orf113Q5VZT2 155 aa-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 HRCT1Q6UXD1 115 aa-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 ATP11AUNQ6ZP68 121 aa-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 Q6ZUT4 128 aa-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 TMED4Q7Z7H5 227 aa-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 TTC9CQ8N5M4 171 aa-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 MAGOHBQ96A72 148 aaKnown RBP-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 ATP6V1G3Q96LB4 118 aa-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 PRO1933Q9H354 126 aa-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 C1orf167Q5SNV9 1468 aa-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 NLRP1Q9C000 1473 aa-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 MBD5Q9P267 1494 aa-0.63□□□□□ -2.51
RNU4-49P-201ENST00000516080 DISP2A7MBM2 1401 aa-0.64□□□□□ -2.51
RNU4-49P-201ENST00000516080 CUX1P39880 1505 aa-0.64□□□□□ -2.51
RNU4-49P-201ENST00000516080 LY75O60449 1722 aa-0.64□□□□□ -2.51
RNU4-49P-201ENST00000516080 COL6A5A8TX70 2615 aa-0.64□□□□□ -2.51
RNU4-49P-201ENST00000516080 PLCH1Q4KWH8 1693 aa-0.64□□□□□ -2.51
RNU4-49P-201ENST00000516080 PBRM1Q86U86 1689 aa-0.64□□□□□ -2.51
RNU4-49P-201ENST00000516080 E7EQ34 232 aa-0.64□□□□□ -2.51
RNU4-49P-201ENST00000516080 DPM2O94777 84 aa-0.64□□□□□ -2.51
RNU4-49P-201ENST00000516080 SFT2D2O95562 160 aa-0.64□□□□□ -2.51
RNU4-49P-201ENST00000516080 HLA-DRB4P13762 266 aa-0.64□□□□□ -2.51
RNU4-49P-201ENST00000516080 LSM6P62312 80 aaKnown RBP-0.64□□□□□ -2.51
RNU4-49P-201ENST00000516080 CCL8P80075 99 aa-0.64□□□□□ -2.51
RNU4-49P-201ENST00000516080 STX12Q86Y82 276 aa-0.64□□□□□ -2.51
RNU4-49P-201ENST00000516080 OR8I2Q8N0Y5 310 aa-0.64□□□□□ -2.51
RNU4-49P-201ENST00000516080 TMEM263Q8WUH6 116 aaKnown RBP-0.64□□□□□ -2.51
RNU4-49P-201ENST00000516080 SPTSSAQ969W0 71 aa-0.64□□□□□ -2.51
RNU4-49P-201ENST00000516080 CCDC115Q96NT0 180 aa-0.64□□□□□ -2.51
RNU4-49P-201ENST00000516080 PSENENQ9NZ42 101 aa-0.64□□□□□ -2.51
RNU4-49P-201ENST00000516080 HIGD1BQ9P298 99 aa-0.64□□□□□ -2.51
RNU4-49P-201ENST00000516080 MED31Q9Y3C7 131 aa-0.64□□□□□ -2.51
RNU4-49P-201ENST00000516080 HLA-DRB4X5D2U9 266 aa-0.64□□□□□ -2.51
RNU4-49P-201ENST00000516080 OVOS2A0A0G2JMS6 1433 aa-0.64□□□□□ -2.51
RNU4-49P-201ENST00000516080 SMG1Q96Q15 3661 aaKnown RBP-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 A0A1B0GUL6 1792 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 AKAP12Q02952 1782 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 EYSQ5T1H1 3165 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 SACSQ9NZJ4 4579 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 ROBO1Q9Y6N7 1651 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 CHD7Q9P2D1 2997 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 DNAH11Q96DT5 4516 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 ARHGEF10O15013 1369 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 TRAV13-2A0A0B4J235 113 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 SPTY2D1-AS1A0A0U1RR47 76 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 A0A1B0GU69 56 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 LOC285095A0A1B0GVY8 99 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 IGLC7A0M8Q6 106 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 SERPINB1P30740 379 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 CDKN2CP42773 168 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 NCS1P62166 190 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 GNG3P63215 75 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 WHAMMP3Q1A5X7 153 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 MIC13Q5XKP0 118 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 CLPSL2Q6UWE3 100 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 SMIM20Q8N5G0 67 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 FAM167A-AS1Q96KT0 104 aa-0.65□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms