RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 CLLU1Q5K131 121 aa-3.74□□□□□ -3.01
SCARNA23-201ENST00000516060 LINC01600Q96MT4 127 aa-3.74□□□□□ -3.01
SCARNA23-201ENST00000516060 LINC01558Q9Y6Z2 57 aa-3.74□□□□□ -3.01
SCARNA23-201ENST00000516060 E7EQ34 232 aa-3.75□□□□□ -3.01
SCARNA23-201ENST00000516060 CMPK1P30085 196 aa-3.75□□□□□ -3.01
SCARNA23-201ENST00000516060 STX12Q86Y82 276 aa-3.75□□□□□ -3.01
SCARNA23-201ENST00000516060 OR13C6PQ8NH95 151 aa-3.75□□□□□ -3.01
SCARNA23-201ENST00000516060 MRPL34Q9BQ48 92 aaKnown RBP-3.75□□□□□ -3.01
SCARNA23-201ENST00000516060 DOCK2Q92608 1830 aa-3.76□□□□□ -3.01
SCARNA23-201ENST00000516060 HLA-DRB4P13762 266 aa-3.76□□□□□ -3.01
SCARNA23-201ENST00000516060 CEBPGP53567 150 aa-3.76□□□□□ -3.01
SCARNA23-201ENST00000516060 FAM24BQ8N5W8 94 aa-3.76□□□□□ -3.01
SCARNA23-201ENST00000516060 FDCSPQ8NFU4 85 aa-3.76□□□□□ -3.01
SCARNA23-201ENST00000516060 TRAPPC2LQ9UL33 140 aa-3.76□□□□□ -3.01
SCARNA23-201ENST00000516060 LSM2Q9Y333 95 aaKnown RBP-3.76□□□□□ -3.01
SCARNA23-201ENST00000516060 HLA-DRB4X5D2U9 266 aa-3.76□□□□□ -3.01
SCARNA23-201ENST00000516060 NCOA3Q9Y6Q9 1424 aa-3.77□□□□□ -3.01
SCARNA23-201ENST00000516060 QRICH2Q9H0J4 1663 aa-3.77□□□□□ -3.01
SCARNA23-201ENST00000516060 CCL22O00626 93 aa-3.77□□□□□ -3.01
SCARNA23-201ENST00000516060 CBLN1P23435 193 aa-3.77□□□□□ -3.01
SCARNA23-201ENST00000516060 B2MP61769 119 aa-3.77□□□□□ -3.01
SCARNA23-201ENST00000516060 HIGD1BQ9P298 99 aa-3.77□□□□□ -3.01
SCARNA23-201ENST00000516060 IGLC7A0M8Q6 106 aa-3.78□□□□□ -3.01
SCARNA23-201ENST00000516060 SIX6O95475 246 aa-3.78□□□□□ -3.01
SCARNA23-201ENST00000516060 FGF7P21781 194 aa-3.78□□□□□ -3.01
SCARNA23-201ENST00000516060 ARHGEF10O15013 1369 aa-3.78□□□□□ -3.02
SCARNA23-201ENST00000516060 A0A087WVE0 104 aa-3.79□□□□□ -3.02
SCARNA23-201ENST00000516060 SPAARA0A1B0GVQ0 90 aa-3.79□□□□□ -3.02
SCARNA23-201ENST00000516060 IFNA1P01562 189 aa-3.79□□□□□ -3.02
SCARNA23-201ENST00000516060 C10orf128Q5T292 105 aa-3.79□□□□□ -3.02
SCARNA23-201ENST00000516060 ATP6V1G3Q96LB4 118 aa-3.79□□□□□ -3.02
SCARNA23-201ENST00000516060 ARL2BPQ9Y2Y0 163 aa-3.79□□□□□ -3.02
SCARNA23-201ENST00000516060 XRN1Q8IZH2 1706 aaKnown RBP-3.8□□□□□ -3.02
SCARNA23-201ENST00000516060 NIPSNAP2O75323 286 aa-3.8□□□□□ -3.02
SCARNA23-201ENST00000516060 SPRR4Q96PI1 79 aa-3.8□□□□□ -3.02
SCARNA23-201ENST00000516060 MYH13Q9UKX3 1938 aa-3.8□□□□□ -3.02
SCARNA23-201ENST00000516060 SMIM24O75264 130 aa-3.81□□□□□ -3.02
SCARNA23-201ENST00000516060 POLR2HP52434 150 aaKnown RBP-3.81□□□□□ -3.02
SCARNA23-201ENST00000516060 BANF2Q9H503 90 aa-3.81□□□□□ -3.02
SCARNA23-201ENST00000516060 ALKQ9UM73 1620 aa-3.81□□□□□ -3.02
SCARNA23-201ENST00000516060 MGPP08493 103 aa-3.82□□□□□ -3.02
SCARNA23-201ENST00000516060 GNG3P63215 75 aa-3.82□□□□□ -3.02
SCARNA23-201ENST00000516060 S100A7L2Q5SY68 101 aa-3.82□□□□□ -3.02
SCARNA23-201ENST00000516060 MIC13Q5XKP0 118 aa-3.82□□□□□ -3.02
SCARNA23-201ENST00000516060 LCN9Q8WX39 176 aa-3.82□□□□□ -3.02
SCARNA23-201ENST00000516060 LLPHQ9BRT6 129 aaKnown RBP-3.82□□□□□ -3.02
SCARNA23-201ENST00000516060 SFT2D2O95562 160 aa-3.83□□□□□ -3.02
SCARNA23-201ENST00000516060 FAM107AO95990 144 aa-3.83□□□□□ -3.02
SCARNA23-201ENST00000516060 DHRS4L2Q6PKH6 230 aa-3.83□□□□□ -3.02
SCARNA23-201ENST00000516060 Q6ZUT4 128 aa-3.83□□□□□ -3.02
SCARNA23-201ENST00000516060 SMIM20Q8N5G0 67 aa-3.83□□□□□ -3.02
SCARNA23-201ENST00000516060 FAM167A-AS1Q96KT0 104 aa-3.83□□□□□ -3.02
SCARNA23-201ENST00000516060 CCDC115Q96NT0 180 aa-3.83□□□□□ -3.02
SCARNA23-201ENST00000516060 CCDC32Q9BV29 185 aa-3.83□□□□□ -3.02
SCARNA23-201ENST00000516060 CALML5Q9NZT1 146 aa-3.83□□□□□ -3.02
SCARNA23-201ENST00000516060 MYH6P13533 1939 aa-3.83□□□□□ -3.02
SCARNA23-201ENST00000516060 C1orf167Q5SNV9 1468 aa-3.84□□□□□ -3.02
SCARNA23-201ENST00000516060 HCG22E2RYF7 251 aa-3.84□□□□□ -3.02
SCARNA23-201ENST00000516060 TPM3P06753 285 aa-3.84□□□□□ -3.02
SCARNA23-201ENST00000516060 UBA52P62987 128 aaKnown RBP-3.84□□□□□ -3.02
SCARNA23-201ENST00000516060 THEM6Q8WUY1 208 aa-3.84□□□□□ -3.02
SCARNA23-201ENST00000516060 AQP10Q96PS8 301 aa-3.84□□□□□ -3.02
SCARNA23-201ENST00000516060 PRG4Q92954 1404 aaPredicted RBP-3.85□□□□□ -3.03
SCARNA23-201ENST00000516060 TRBV20-1A0A075B6N2 111 aa-3.85□□□□□ -3.03
SCARNA23-201ENST00000516060 TTC9CQ8N5M4 171 aa-3.85□□□□□ -3.03
SCARNA23-201ENST00000516060 SEC11CQ9BY50 192 aa-3.85□□□□□ -3.03
SCARNA23-201ENST00000516060 IFT140Q96RY7 1462 aa-3.86□□□□□ -3.03
SCARNA23-201ENST00000516060 CRYBG3Q68DQ2 2970 aa-3.86□□□□□ -3.03
SCARNA23-201ENST00000516060 CDC42BPAQ5VT25 1732 aa-3.86□□□□□ -3.03
SCARNA23-201ENST00000516060 LOC100130705A0A1B0GUX0 176 aa-3.86□□□□□ -3.03
SCARNA23-201ENST00000516060 H7BZZ5 65 aa-3.86□□□□□ -3.03
SCARNA23-201ENST00000516060 MT-ND4LP03901 98 aa-3.86□□□□□ -3.03
SCARNA23-201ENST00000516060 CFAP53Q96M91 514 aa-3.86□□□□□ -3.03
SCARNA23-201ENST00000516060 MYO15AQ9UKN7 3530 aa-3.86□□□□□ -3.03
SCARNA23-201ENST00000516060 ARHGEF5Q12774 1597 aa-3.87□□□□□ -3.03
SCARNA23-201ENST00000516060 IL5P05113 134 aa-3.87□□□□□ -3.03
SCARNA23-201ENST00000516060 PAEPP09466 180 aa-3.87□□□□□ -3.03
SCARNA23-201ENST00000516060 SEC11AP67812 179 aa-3.87□□□□□ -3.03
SCARNA23-201ENST00000516060 PPP1R2P3Q6NXS1 205 aa-3.87□□□□□ -3.03
SCARNA23-201ENST00000516060 PLB1Q6P1J6 1458 aa-3.87□□□□□ -3.03
SCARNA23-201ENST00000516060 ARAP2Q8WZ64 1704 aa-3.87□□□□□ -3.03
SCARNA23-201ENST00000516060 KIAA1551Q9HCM1 1747 aa-3.87□□□□□ -3.03
SCARNA23-201ENST00000516060 PPIP5K1Q6PFW1 1433 aa-3.87□□□□□ -3.03
SCARNA23-201ENST00000516060 TRAV13-2A0A0B4J235 113 aa-3.88□□□□□ -3.03
SCARNA23-201ENST00000516060 MBD5Q9P267 1494 aa-3.88□□□□□ -3.03
SCARNA23-201ENST00000516060 SCN11AQ9UI33 1791 aa-3.89□□□□□ -3.03
SCARNA23-201ENST00000516060 HMGN4O00479 90 aa-3.89□□□□□ -3.03
SCARNA23-201ENST00000516060 TCTAP57738 103 aa-3.89□□□□□ -3.03
SCARNA23-201ENST00000516060 TPM4P67936 248 aa-3.89□□□□□ -3.03
SCARNA23-201ENST00000516060 TMEM244Q5VVB8 128 aa-3.89□□□□□ -3.03
SCARNA23-201ENST00000516060 CLPSL2Q6UWE3 100 aa-3.89□□□□□ -3.03
SCARNA23-201ENST00000516060 DYNLRB1Q9NP97 96 aa-3.89□□□□□ -3.03
SCARNA23-201ENST00000516060 PLEKHH2Q8IVE3 1493 aa-3.9□□□□□ -3.03
SCARNA23-201ENST00000516060 DPM2O94777 84 aa-3.9□□□□□ -3.03
SCARNA23-201ENST00000516060 IGLC1P0CG04 106 aa-3.9□□□□□ -3.03
SCARNA23-201ENST00000516060 WFDC9Q8NEX5 89 aa-3.9□□□□□ -3.03
SCARNA23-201ENST00000516060 PRO1933Q9H354 126 aa-3.9□□□□□ -3.03
SCARNA23-201ENST00000516060 OVOS2A0A0G2JMS6 1433 aa-3.9□□□□□ -3.03
SCARNA23-201ENST00000516060 CLIP1P30622 1438 aa-3.9□□□□□ -3.03
SCARNA23-201ENST00000516060 ANKRD36A6QL64 1941 aa-3.9□□□□□ -3.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms