RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 ORMDL2Q53FV1 153 aa4.76□□□□□ -1.65
RFC1-213ENST00000512275 C2orf66Q6UXQ4 117 aa4.76□□□□□ -1.65
RFC1-213ENST00000512275 LINC00173Q6ZV60 143 aa4.76□□□□□ -1.65
RFC1-213ENST00000512275 DAZ4Q86SG3 579 aaKnown RBP4.76□□□□□ -1.65
RFC1-213ENST00000512275 ATP6V0E2Q8NHE4 81 aa4.76□□□□□ -1.65
RFC1-213ENST00000512275 HIST1H2BLQ99880 126 aa4.76□□□□□ -1.65
RFC1-213ENST00000512275 DAZ3Q9NR90 486 aaKnown RBP4.76□□□□□ -1.65
RFC1-213ENST00000512275 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.75□□□□□ -1.65
RFC1-213ENST00000512275 LOC105371267A0A1B0GV96 52 aa4.75□□□□□ -1.65
RFC1-213ENST00000512275 IGKV2-29A2NJV5 120 aaPredicted RBP4.75□□□□□ -1.65
RFC1-213ENST00000512275 PCP4L1A6NKN8 68 aa4.75□□□□□ -1.65
RFC1-213ENST00000512275 SEC61GP60059 68 aa4.75□□□□□ -1.65
RFC1-213ENST00000512275 MRPL23Q16540 153 aaKnown RBP4.75□□□□□ -1.65
RFC1-213ENST00000512275 Q1RN00 199 aa4.75□□□□□ -1.65
RFC1-213ENST00000512275 HIGD2BQ4VC39 106 aa4.75□□□□□ -1.65
RFC1-213ENST00000512275 NTM-AS1Q6ZSK4 140 aa4.75□□□□□ -1.65
RFC1-213ENST00000512275 CHCHD7Q9BUK0 85 aa4.75□□□□□ -1.65
RFC1-213ENST00000512275 TRBV25-1A0A075B6N4 114 aa4.74□□□□□ -1.65
RFC1-213ENST00000512275 A0A1B0GWB2 263 aa4.74□□□□□ -1.65
RFC1-213ENST00000512275 IGLL5B9A064 214 aa4.74□□□□□ -1.65
RFC1-213ENST00000512275 H0Y8G0 127 aa4.74□□□□□ -1.65
RFC1-213ENST00000512275 K7EMI3 77 aa4.74□□□□□ -1.65
RFC1-213ENST00000512275 LEPROTL1O95214 131 aa4.74□□□□□ -1.65
RFC1-213ENST00000512275 AKR1D1P51857 326 aa4.74□□□□□ -1.65
RFC1-213ENST00000512275 KRTDAPP60985 99 aa4.74□□□□□ -1.65
RFC1-213ENST00000512275 C20orf203Q8NBC4 194 aa4.74□□□□□ -1.65
RFC1-213ENST00000512275 OR10D4PQ8NGN7 298 aa4.74□□□□□ -1.65
RFC1-213ENST00000512275 PACRGQ96M98 296 aaPredicted RBP4.74□□□□□ -1.65
RFC1-213ENST00000512275 TMEM243Q9BU79 118 aa4.74□□□□□ -1.65
RFC1-213ENST00000512275 GTSF1LQ9H1H1 148 aa4.74□□□□□ -1.65
RFC1-213ENST00000512275 CYSLTR1Q9Y271 337 aa4.74□□□□□ -1.65
RFC1-213ENST00000512275 TGP01266 2768 aa4.73□□□□□ -1.65
RFC1-213ENST00000512275 TRBV6-8A0A0A6YYG3 113 aa4.73□□□□□ -1.65
RFC1-213ENST00000512275 H3BNG1 76 aa4.73□□□□□ -1.65
RFC1-213ENST00000512275 UBE2L6O14933 153 aa4.73□□□□□ -1.65
RFC1-213ENST00000512275 HNRNPA3P51991 378 aaKnown RBP4.73□□□□□ -1.65
RFC1-213ENST00000512275 ZFAND6Q6FIF0 208 aa4.73□□□□□ -1.65
RFC1-213ENST00000512275 CEMP1Q6PRD7 247 aaPredicted RBP4.73□□□□□ -1.65
RFC1-213ENST00000512275 TOMM6Q96B49 74 aa4.73□□□□□ -1.65
RFC1-213ENST00000512275 SCGB3A1Q96QR1 104 aa4.73□□□□□ -1.65
RFC1-213ENST00000512275 HSPB8Q9UJY1 196 aa4.73□□□□□ -1.65
RFC1-213ENST00000512275 C3orf79P0CE67 100 aa4.72□□□□□ -1.65
RFC1-213ENST00000512275 FGF6P10767 208 aa4.72□□□□□ -1.65
RFC1-213ENST00000512275 TMEM97Q5BJF2 176 aa4.72□□□□□ -1.65
RFC1-213ENST00000512275 RNASE13Q5GAN3 156 aaKnown RBP4.72□□□□□ -1.65
RFC1-213ENST00000512275 AMMECR1LQ6DCA0 310 aa4.72□□□□□ -1.65
RFC1-213ENST00000512275 LYPD5Q6UWN5 251 aa4.72□□□□□ -1.65
RFC1-213ENST00000512275 SH2D6Q7Z4S9 175 aa4.72□□□□□ -1.65
RFC1-213ENST00000512275 SPATA12Q7Z6I5 190 aa4.72□□□□□ -1.65
RFC1-213ENST00000512275 C15orf53Q8NAA6 179 aa4.72□□□□□ -1.65
RFC1-213ENST00000512275 IFI27L1Q96BM0 104 aa4.72□□□□□ -1.65
RFC1-213ENST00000512275 NUPR2A6NF83 97 aa4.71□□□□□ -1.66
RFC1-213ENST00000512275 IGIPA6NJ69 53 aa4.71□□□□□ -1.66
RFC1-213ENST00000512275 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.71□□□□□ -1.66
RFC1-213ENST00000512275 ATP5LO75964 103 aa4.71□□□□□ -1.66
RFC1-213ENST00000512275 G0S2P27469 103 aa4.71□□□□□ -1.66
RFC1-213ENST00000512275 RPL13AP40429 203 aaKnown RBP4.71□□□□□ -1.66
RFC1-213ENST00000512275 PRR4Q16378 134 aa4.71□□□□□ -1.66
RFC1-213ENST00000512275 ESRGQ1W209 222 aa4.71□□□□□ -1.66
RFC1-213ENST00000512275 LELP1Q5T871 98 aa4.71□□□□□ -1.66
RFC1-213ENST00000512275 Q6ZN92 141 aa4.71□□□□□ -1.66
RFC1-213ENST00000512275 Q6ZUT4 128 aa4.71□□□□□ -1.66
RFC1-213ENST00000512275 MAP1LC3CQ9BXW4 147 aa4.71□□□□□ -1.66
RFC1-213ENST00000512275 UBE2D4Q9Y2X8 147 aa4.71□□□□□ -1.66
RFC1-213ENST00000512275 DYNC2H1Q8NCM8 4307 aaKnown RBP4.7□□□□□ -1.66
RFC1-213ENST00000512275 TMEM262E9PQX1 116 aa4.7□□□□□ -1.66
RFC1-213ENST00000512275 SYS1-DBNDD2H3BUS1 97 aa4.7□□□□□ -1.66
RFC1-213ENST00000512275 MPV17L2Q567V2 206 aa4.7□□□□□ -1.66
RFC1-213ENST00000512275 WFDC10BQ8IUB3 73 aa4.7□□□□□ -1.66
RFC1-213ENST00000512275 Q8N976 141 aa4.7□□□□□ -1.66
RFC1-213ENST00000512275 OR5A1Q8NGJ0 315 aa4.7□□□□□ -1.66
RFC1-213ENST00000512275 BAALCQ8WXS3 180 aa4.7□□□□□ -1.66
RFC1-213ENST00000512275 TMEM141Q96I45 108 aa4.7□□□□□ -1.66
RFC1-213ENST00000512275 TIMM17AQ99595 171 aa4.7□□□□□ -1.66
RFC1-213ENST00000512275 PMCHL2Q9BQD1 86 aa4.7□□□□□ -1.66
RFC1-213ENST00000512275 SPANXA1Q9NS26 97 aa4.7□□□□□ -1.66
RFC1-213ENST00000512275 KLK5Q9Y337 293 aaPredicted RBP4.7□□□□□ -1.66
RFC1-213ENST00000512275 DNAH7Q8WXX0 4024 aa4.69□□□□□ -1.66
RFC1-213ENST00000512275 IGLV4-60A0A075B6I1 120 aa4.69□□□□□ -1.66
RFC1-213ENST00000512275 TRAV8-6A0A0B4J262 113 aa4.69□□□□□ -1.66
RFC1-213ENST00000512275 IGKV3OR2-268A0A0C4DH90 116 aa4.69□□□□□ -1.66
RFC1-213ENST00000512275 LINC01549A6NIU2 74 aa4.69□□□□□ -1.66
RFC1-213ENST00000512275 IGHV3-30P01768 117 aa4.69□□□□□ -1.66
RFC1-213ENST00000512275 IGHV3-33P01772 117 aa4.69□□□□□ -1.66
RFC1-213ENST00000512275 IGHV3-30-3P0DP02 117 aa4.69□□□□□ -1.66
RFC1-213ENST00000512275 IGHV3-30-5P0DP03 117 aa4.69□□□□□ -1.66
RFC1-213ENST00000512275 RBX1P62877 108 aa4.69□□□□□ -1.66
RFC1-213ENST00000512275 CLPSL2Q6UWE3 100 aa4.69□□□□□ -1.66
RFC1-213ENST00000512275 MRPL52Q86TS9 123 aaKnown RBP4.69□□□□□ -1.66
RFC1-213ENST00000512275 TYMSOSQ8TAI1 123 aa4.69□□□□□ -1.66
RFC1-213ENST00000512275 FAM104AQ969W3 186 aa4.69□□□□□ -1.66
RFC1-213ENST00000512275 TMEM101Q96IK0 257 aa4.69□□□□□ -1.66
RFC1-213ENST00000512275 TIMM21Q9BVV7 248 aa4.69□□□□□ -1.66
RFC1-213ENST00000512275 APLNQ9ULZ1 77 aa4.69□□□□□ -1.66
RFC1-213ENST00000512275 LINC00588Q9Y4M8 146 aa4.69□□□□□ -1.66
RFC1-213ENST00000512275 A0A087WX48 190 aa4.68□□□□□ -1.66
RFC1-213ENST00000512275 CCL18P55774 89 aa4.68□□□□□ -1.66
RFC1-213ENST00000512275 SMAGPQ0VAQ4 97 aa4.68□□□□□ -1.66
RFC1-213ENST00000512275 PMVKQ15126 192 aa4.68□□□□□ -1.66
RFC1-213ENST00000512275 C6orf226Q5I0X4 101 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms