RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 AKR1D1P51857 326 aa5.8□□□□□ -1.48
NEDD9-211ENST00000508546 LINC00310P59036 64 aa5.8□□□□□ -1.48
NEDD9-211ENST00000508546 PRELID3AQ96N28 172 aa5.8□□□□□ -1.48
NEDD9-211ENST00000508546 TMEM243Q9BU79 118 aa5.8□□□□□ -1.48
NEDD9-211ENST00000508546 GVQW2A0A096LPI5 108 aaPredicted RBP5.79□□□□□ -1.48
NEDD9-211ENST00000508546 IFITM10A6NMD0 228 aa5.79□□□□□ -1.48
NEDD9-211ENST00000508546 SMKR1H3BMG3 65 aa5.79□□□□□ -1.48
NEDD9-211ENST00000508546 H7C1H1 209 aa5.79□□□□□ -1.48
NEDD9-211ENST00000508546 M0QY20 66 aa5.79□□□□□ -1.48
NEDD9-211ENST00000508546 MGPP08493 103 aa5.79□□□□□ -1.48
NEDD9-211ENST00000508546 SMIM17P0DL12 118 aa5.79□□□□□ -1.48
NEDD9-211ENST00000508546 ESDP10768 282 aa5.79□□□□□ -1.48
NEDD9-211ENST00000508546 FABP4P15090 132 aa5.79□□□□□ -1.48
NEDD9-211ENST00000508546 RNASEKQ6P5S7 137 aaKnown RBP5.79□□□□□ -1.48
NEDD9-211ENST00000508546 TMEM18Q96B42 140 aa5.79□□□□□ -1.48
NEDD9-211ENST00000508546 MRAP2Q96G30 205 aa5.79□□□□□ -1.48
NEDD9-211ENST00000508546 HIST1H2BLQ99880 126 aa5.79□□□□□ -1.48
NEDD9-211ENST00000508546 PKIGQ9Y2B9 76 aa5.79□□□□□ -1.48
NEDD9-211ENST00000508546 LAMTOR2Q9Y2Q5 125 aa5.79□□□□□ -1.48
NEDD9-211ENST00000508546 GAGE12HA6NDE8 117 aa5.78□□□□□ -1.48
NEDD9-211ENST00000508546 HSBP1O75506 76 aa5.78□□□□□ -1.48
NEDD9-211ENST00000508546 NPYP01303 97 aa5.78□□□□□ -1.48
NEDD9-211ENST00000508546 HIGD2BQ4VC39 106 aa5.78□□□□□ -1.48
NEDD9-211ENST00000508546 LCE2DQ5TA82 110 aaPredicted RBP5.78□□□□□ -1.48
NEDD9-211ENST00000508546 PACRGQ96M98 296 aaPredicted RBP5.78□□□□□ -1.48
NEDD9-211ENST00000508546 TRAV26-2A0A0B4J265 109 aa5.77□□□□□ -1.49
NEDD9-211ENST00000508546 NUPR1O60356 82 aa5.77□□□□□ -1.49
NEDD9-211ENST00000508546 TNFRSF6BO95407 300 aa5.77□□□□□ -1.49
NEDD9-211ENST00000508546 PMCHP20382 165 aa5.77□□□□□ -1.49
NEDD9-211ENST00000508546 CHCHD1Q96BP2 118 aaKnown RBP5.77□□□□□ -1.49
NEDD9-211ENST00000508546 MAP1LC3AQ9H492 121 aa5.77□□□□□ -1.49
NEDD9-211ENST00000508546 UBE2L6O14933 153 aa5.76□□□□□ -1.49
NEDD9-211ENST00000508546 AMTP48728 403 aa5.76□□□□□ -1.49
NEDD9-211ENST00000508546 SUMO4Q6EEV6 95 aa5.76□□□□□ -1.49
NEDD9-211ENST00000508546 FA2HQ7L5A8 372 aa5.76□□□□□ -1.49
NEDD9-211ENST00000508546 ZNF664Q8N3J9 261 aa5.76□□□□□ -1.49
NEDD9-211ENST00000508546 OR10D4PQ8NGN7 298 aa5.76□□□□□ -1.49
NEDD9-211ENST00000508546 URB1-AS1Q96HZ7 61 aa5.76□□□□□ -1.49
NEDD9-211ENST00000508546 PSORS1C2Q9UIG4 136 aa5.76□□□□□ -1.49
NEDD9-211ENST00000508546 LOC389332A0A1B0GUA5 103 aa5.75□□□□□ -1.49
NEDD9-211ENST00000508546 PPP1R17O96001 155 aa5.75□□□□□ -1.49
NEDD9-211ENST00000508546 LINC00614P0C842 121 aa5.75□□□□□ -1.49
NEDD9-211ENST00000508546 SMIM6P0DI80 62 aa5.75□□□□□ -1.49
NEDD9-211ENST00000508546 IFI27P40305 119 aaPredicted RBP5.75□□□□□ -1.49
NEDD9-211ENST00000508546 NRACQ8N912 160 aa5.75□□□□□ -1.49
NEDD9-211ENST00000508546 CHCHD10Q8WYQ3 142 aaPredicted RBP5.75□□□□□ -1.49
NEDD9-211ENST00000508546 NXT2Q9NPJ8 142 aaKnown RBP5.75□□□□□ -1.49
NEDD9-211ENST00000508546 COTL1Q14019 142 aa5.74□□□□□ -1.49
NEDD9-211ENST00000508546 FAM19A2Q8N3H0 131 aa5.74□□□□□ -1.49
NEDD9-211ENST00000508546 RPL39LQ96EH5 51 aaKnown RBP5.74□□□□□ -1.49
NEDD9-211ENST00000508546 C20orf78Q9BR46 151 aa5.74□□□□□ -1.49
NEDD9-211ENST00000508546 SMIM2Q9BVW6 85 aa5.74□□□□□ -1.49
NEDD9-211ENST00000508546 NIT2Q9NQR4 276 aa5.74□□□□□ -1.49
NEDD9-211ENST00000508546 IGKV3OR2-268A0A0C4DH90 116 aa5.73□□□□□ -1.49
NEDD9-211ENST00000508546 PRSS47A8MTI9 375 aa5.73□□□□□ -1.49
NEDD9-211ENST00000508546 SUMO2P61956 95 aaKnown RBP5.73□□□□□ -1.49
NEDD9-211ENST00000508546 FOXI1Q12951 378 aa5.73□□□□□ -1.49
NEDD9-211ENST00000508546 PMCHL1Q16048 86 aa5.73□□□□□ -1.49
NEDD9-211ENST00000508546 Q8N8P6 123 aa5.73□□□□□ -1.49
NEDD9-211ENST00000508546 CARD19Q96LW7 228 aa5.73□□□□□ -1.49
NEDD9-211ENST00000508546 IGHV1-58A0A0C4DH39 117 aa5.72□□□□□ -1.49
NEDD9-211ENST00000508546 LINC01546A6NGU7 62 aa5.72□□□□□ -1.49
NEDD9-211ENST00000508546 PTTG1IPP53801 180 aa5.72□□□□□ -1.49
NEDD9-211ENST00000508546 ST20Q9HBF5 79 aa5.72□□□□□ -1.49
NEDD9-211ENST00000508546 A0A096LNJ9 63 aa5.71□□□□□ -1.5
NEDD9-211ENST00000508546 TRBV6-5A0A0K0K1A5 114 aa5.71□□□□□ -1.5
NEDD9-211ENST00000508546 H7C423 109 aa5.71□□□□□ -1.5
NEDD9-211ENST00000508546 LEPROTL1O95214 131 aa5.71□□□□□ -1.5
NEDD9-211ENST00000508546 HBDP02042 147 aa5.71□□□□□ -1.5
NEDD9-211ENST00000508546 RPL32P62910 135 aaKnown RBP5.71□□□□□ -1.5
NEDD9-211ENST00000508546 PYY3Q5JQD4 70 aa5.71□□□□□ -1.5
NEDD9-211ENST00000508546 LINC00518Q8N0U6 118 aa5.71□□□□□ -1.5
NEDD9-211ENST00000508546 PRR26Q8N8Z3 221 aa5.71□□□□□ -1.5
NEDD9-211ENST00000508546 LOC107984640A0A0U1RRK4 108 aa5.7□□□□□ -1.5
NEDD9-211ENST00000508546 A0A1W2PNN7 141 aa5.7□□□□□ -1.5
NEDD9-211ENST00000508546 SDHAF1A6NFY7 115 aa5.7□□□□□ -1.5
NEDD9-211ENST00000508546 K7EMI3 77 aa5.7□□□□□ -1.5
NEDD9-211ENST00000508546 KRTDAPP60985 99 aa5.7□□□□□ -1.5
NEDD9-211ENST00000508546 SYCNQ0VAF6 134 aa5.7□□□□□ -1.5
NEDD9-211ENST00000508546 JOSD1Q15040 202 aaPredicted RBP5.7□□□□□ -1.5
NEDD9-211ENST00000508546 AMMECR1LQ6DCA0 310 aa5.7□□□□□ -1.5
NEDD9-211ENST00000508546 OR5A1Q8NGJ0 315 aa5.7□□□□□ -1.5
NEDD9-211ENST00000508546 DIRC1Q969H9 104 aa5.7□□□□□ -1.5
NEDD9-211ENST00000508546 LINC00526Q96FQ7 95 aa5.7□□□□□ -1.5
NEDD9-211ENST00000508546 C12orf57Q99622 126 aa5.7□□□□□ -1.5
NEDD9-211ENST00000508546 HSPB8Q9UJY1 196 aa5.7□□□□□ -1.5
NEDD9-211ENST00000508546 TCAPO15273 167 aa5.69□□□□□ -1.5
NEDD9-211ENST00000508546 C3orf79P0CE67 100 aa5.69□□□□□ -1.5
NEDD9-211ENST00000508546 ZNF25P17030 456 aaPredicted RBP5.69□□□□□ -1.5
NEDD9-211ENST00000508546 FCER1GP30273 86 aa5.69□□□□□ -1.5
NEDD9-211ENST00000508546 ORMDL2Q53FV1 153 aa5.69□□□□□ -1.5
NEDD9-211ENST00000508546 KIR2DL4Q99706 377 aa5.69□□□□□ -1.5
NEDD9-211ENST00000508546 IGLV1-50A0A075B6I6 118 aa5.68□□□□□ -1.5
NEDD9-211ENST00000508546 TRBV27A0A0K0K1C4 114 aa5.68□□□□□ -1.5
NEDD9-211ENST00000508546 LINC00959A0A1B0GUT2 108 aa5.68□□□□□ -1.5
NEDD9-211ENST00000508546 ZNF561-AS1K7EIQ3 104 aa5.68□□□□□ -1.5
NEDD9-211ENST00000508546 VCYO14598 125 aa5.68□□□□□ -1.5
NEDD9-211ENST00000508546 CCL25O15444 150 aa5.68□□□□□ -1.5
NEDD9-211ENST00000508546 SCGB1D1O95968 90 aa5.68□□□□□ -1.5
NEDD9-211ENST00000508546 FGF6P10767 208 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms