RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 TRAV13-1A0A0B4J241 112 aa3.54□□□□□ -1.84
GYPB-205ENST00000505583 TRBV27A0A0K0K1C4 114 aa3.54□□□□□ -1.84
GYPB-205ENST00000505583 C7orf77A4D0Y5 90 aa3.54□□□□□ -1.84
GYPB-205ENST00000505583 A8MWL6 223 aa3.54□□□□□ -1.84
GYPB-205ENST00000505583 COX7A2LO14548 114 aa3.54□□□□□ -1.84
GYPB-205ENST00000505583 APOMO95445 188 aa3.54□□□□□ -1.84
GYPB-205ENST00000505583 MT-ND6P03923 174 aa3.54□□□□□ -1.84
GYPB-205ENST00000505583 SNRPEP62304 92 aaKnown RBP3.54□□□□□ -1.84
GYPB-205ENST00000505583 C1orf137Q5JT78 98 aa3.54□□□□□ -1.84
GYPB-205ENST00000505583 EIF5AL1Q6IS14 154 aaKnown RBP3.54□□□□□ -1.84
GYPB-205ENST00000505583 KRTAP5-3Q6L8H2 238 aa3.54□□□□□ -1.84
GYPB-205ENST00000505583 Q6ZUT4 128 aa3.54□□□□□ -1.84
GYPB-205ENST00000505583 FAM231DQ6ZW35 169 aa3.54□□□□□ -1.84
GYPB-205ENST00000505583 SMIM15Q7Z3B0 74 aa3.54□□□□□ -1.84
GYPB-205ENST00000505583 KRTAP7-1Q8IUC3 87 aa3.54□□□□□ -1.84
GYPB-205ENST00000505583 NRACQ8N912 160 aa3.54□□□□□ -1.84
GYPB-205ENST00000505583 CAMK2N2Q96S95 79 aa3.54□□□□□ -1.84
GYPB-205ENST00000505583 TMEM191AQ9H0A3 160 aa3.54□□□□□ -1.84
GYPB-205ENST00000505583 UBE2D4Q9Y2X8 147 aa3.54□□□□□ -1.84
GYPB-205ENST00000505583 MUC2Q02817 5179 aa3.54□□□□□ -1.84
GYPB-205ENST00000505583 A4D1N5 150 aa3.53□□□□□ -1.84
GYPB-205ENST00000505583 HIGD1CA8MV81 97 aa3.53□□□□□ -1.84
GYPB-205ENST00000505583 C1orf196B1AJZ1 125 aa3.53□□□□□ -1.84
GYPB-205ENST00000505583 IGLV7-43P04211 117 aa3.53□□□□□ -1.84
GYPB-205ENST00000505583 KRTAP1-4P0C5Y4 121 aa3.53□□□□□ -1.84
GYPB-205ENST00000505583 RPL18AQ02543 176 aaKnown RBP3.53□□□□□ -1.84
GYPB-205ENST00000505583 C10orf25Q5T742 122 aa3.53□□□□□ -1.84
GYPB-205ENST00000505583 PKIGQ9Y2B9 76 aa3.53□□□□□ -1.84
GYPB-205ENST00000505583 A0A1B0GUT8 65 aa3.52□□□□□ -1.85
GYPB-205ENST00000505583 TAGLN2P37802 199 aaKnown RBP3.52□□□□□ -1.85
GYPB-205ENST00000505583 CEBPGP53567 150 aa3.52□□□□□ -1.85
GYPB-205ENST00000505583 RPL39P62891 51 aaKnown RBP3.52□□□□□ -1.85
GYPB-205ENST00000505583 SPAG11BQ08648 103 aa3.52□□□□□ -1.85
GYPB-205ENST00000505583 LINC01551Q86U37 167 aa3.52□□□□□ -1.85
GYPB-205ENST00000505583 SLC51BQ86UW2 128 aa3.52□□□□□ -1.85
GYPB-205ENST00000505583 TSKUQ8WUA8 353 aa3.52□□□□□ -1.85
GYPB-205ENST00000505583 ISOC2Q96AB3 205 aa3.52□□□□□ -1.85
GYPB-205ENST00000505583 C2orf48Q96LS8 159 aa3.52□□□□□ -1.85
GYPB-205ENST00000505583 CSDC2Q9Y534 153 aaKnown RBP3.52□□□□□ -1.85
GYPB-205ENST00000505583 A0A087WZ39 114 aa3.51□□□□□ -1.85
GYPB-205ENST00000505583 IGHV3OR16-9A0A0B4J2B5 98 aa3.51□□□□□ -1.85
GYPB-205ENST00000505583 H0Y9J4 135 aa3.51□□□□□ -1.85
GYPB-205ENST00000505583 TMEM250H0YL14 139 aa3.51□□□□□ -1.85
GYPB-205ENST00000505583 FCER1GP30273 86 aa3.51□□□□□ -1.85
GYPB-205ENST00000505583 MRPL51Q4U2R6 128 aaKnown RBP3.51□□□□□ -1.85
GYPB-205ENST00000505583 ALKAL2Q6UX46 152 aa3.51□□□□□ -1.85
GYPB-205ENST00000505583 UNQ6190/PRO20217Q6UXQ8 127 aa3.51□□□□□ -1.85
GYPB-205ENST00000505583 FAM19A5Q7Z5A7 132 aaPredicted RBP3.51□□□□□ -1.85
GYPB-205ENST00000505583 TCTE3Q8IZS6 198 aa3.51□□□□□ -1.85
GYPB-205ENST00000505583 DIRC1Q969H9 104 aa3.51□□□□□ -1.85
GYPB-205ENST00000505583 BORCS7Q96B45 105 aa3.51□□□□□ -1.85
GYPB-205ENST00000505583 C6orf48Q9UBA6 75 aa3.51□□□□□ -1.85
GYPB-205ENST00000505583 V9GYV3 84 aa3.51□□□□□ -1.85
GYPB-205ENST00000505583 GAGE2EQ4V326 116 aa3.5□□□□□ -1.85
GYPB-205ENST00000505583 GAGE2AQ6NT46 116 aa3.5□□□□□ -1.85
GYPB-205ENST00000505583 ORAOV1Q8WV07 137 aa3.5□□□□□ -1.85
GYPB-205ENST00000505583 FAM210AQ96ND0 272 aa3.5□□□□□ -1.85
GYPB-205ENST00000505583 SMIM7Q9BQ49 75 aa3.5□□□□□ -1.85
GYPB-205ENST00000505583 TIMM21Q9BVV7 248 aa3.5□□□□□ -1.85
GYPB-205ENST00000505583 OSTCQ9NRP0 149 aa3.5□□□□□ -1.85
GYPB-205ENST00000505583 MRPL35Q9NZE8 188 aaKnown RBP3.5□□□□□ -1.85
GYPB-205ENST00000505583 GAGE2DQ9UEU5 116 aa3.5□□□□□ -1.85
GYPB-205ENST00000505583 ZNF727A8MUV8 499 aa3.49□□□□□ -1.85
GYPB-205ENST00000505583 SRP19P09132 144 aaKnown RBP3.49□□□□□ -1.85
GYPB-205ENST00000505583 TLX1NBP0CAT3 122 aa3.49□□□□□ -1.85
GYPB-205ENST00000505583 UBE2V1Q13404 147 aa3.49□□□□□ -1.85
GYPB-205ENST00000505583 KIAA0087Q14695 138 aa3.49□□□□□ -1.85
GYPB-205ENST00000505583 C9orf129Q5T035 196 aaKnown RBP3.49□□□□□ -1.85
GYPB-205ENST00000505583 FAM104BQ5XKR9 115 aa3.49□□□□□ -1.85
GYPB-205ENST00000505583 C2orf82Q6UX34 121 aa3.49□□□□□ -1.85
GYPB-205ENST00000505583 OR10D4PQ8NGN7 298 aa3.49□□□□□ -1.85
GYPB-205ENST00000505583 KIR2DL4Q99706 377 aa3.49□□□□□ -1.85
GYPB-205ENST00000505583 SMDT1Q9H4I9 107 aa3.49□□□□□ -1.85
GYPB-205ENST00000505583 IGLV1-50A0A075B6I6 118 aa3.48□□□□□ -1.85
GYPB-205ENST00000505583 TRBV24-1A0A075B6N3 115 aa3.48□□□□□ -1.85
GYPB-205ENST00000505583 C9JQL5 133 aa3.48□□□□□ -1.85
GYPB-205ENST00000505583 NDUFA1O15239 70 aa3.48□□□□□ -1.85
GYPB-205ENST00000505583 TCAPO15273 167 aa3.48□□□□□ -1.85
GYPB-205ENST00000505583 RIGQ13278 110 aa3.48□□□□□ -1.85
GYPB-205ENST00000505583 PRR4Q16378 134 aa3.48□□□□□ -1.85
GYPB-205ENST00000505583 LCE5AQ5TCM9 118 aa3.48□□□□□ -1.85
GYPB-205ENST00000505583 IMMP2LQ96T52 175 aa3.48□□□□□ -1.85
GYPB-205ENST00000505583 KRTAP9-3Q9BYQ3 159 aa3.48□□□□□ -1.85
GYPB-205ENST00000505583 EIF5A2Q9GZV4 153 aaKnown RBP3.48□□□□□ -1.85
GYPB-205ENST00000505583 IFITM10A6NMD0 228 aa3.47□□□□□ -1.85
GYPB-205ENST00000505583 M0QXV9 152 aa3.47□□□□□ -1.85
GYPB-205ENST00000505583 PPP1R2P9O14990 202 aa3.47□□□□□ -1.85
GYPB-205ENST00000505583 PPP1R17O96001 155 aa3.47□□□□□ -1.85
GYPB-205ENST00000505583 NPYP01303 97 aa3.47□□□□□ -1.85
GYPB-205ENST00000505583 RPL23P62829 140 aaKnown RBP3.47□□□□□ -1.85
GYPB-205ENST00000505583 RPL32P62910 135 aaKnown RBP3.47□□□□□ -1.85
GYPB-205ENST00000505583 MRPS36P82909 103 aaKnown RBP3.47□□□□□ -1.85
GYPB-205ENST00000505583 TMEM241Q24JQ0 296 aa3.47□□□□□ -1.85
GYPB-205ENST00000505583 FAM74A3Q4VXF1 159 aa3.47□□□□□ -1.85
GYPB-205ENST00000505583 LINC00242Q5T6M2 205 aa3.47□□□□□ -1.85
GYPB-205ENST00000505583 ZC2HC1BQ5TFG8 222 aa3.47□□□□□ -1.85
GYPB-205ENST00000505583 MPLKIPQ8TAP9 179 aa3.47□□□□□ -1.85
GYPB-205ENST00000505583 C20orf78Q9BR46 151 aa3.47□□□□□ -1.85
GYPB-205ENST00000505583 SMIM2Q9BVW6 85 aa3.47□□□□□ -1.85
GYPB-205ENST00000505583 SPANXA1Q9NS26 97 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms