RNA–Protein interactions for RNA: ENST00000504643.5

MATR3-210, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 2,560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-210ENST00000504643 LINC00526Q96FQ7 95 aa4.8□□□□□ -1.64
MATR3-210ENST00000504643 SPANXA1Q9NS26 97 aa4.8□□□□□ -1.64
MATR3-210ENST00000504643 F8W036 122 aa4.8□□□□□ -1.64
MATR3-210ENST00000504643 NDUFA1O15239 70 aa4.8□□□□□ -1.64
MATR3-210ENST00000504643 C9orf116Q5BN46 136 aaPredicted RBP4.8□□□□□ -1.64
MATR3-210ENST00000504643 FAM104BQ5XKR9 115 aa4.8□□□□□ -1.64
MATR3-210ENST00000504643 ALKAL2Q6UX46 152 aa4.8□□□□□ -1.64
MATR3-210ENST00000504643 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.79□□□□□ -1.64
MATR3-210ENST00000504643 PPBPP02775 128 aa4.79□□□□□ -1.64
MATR3-210ENST00000504643 TLX1NBP0CAT3 122 aa4.79□□□□□ -1.64
MATR3-210ENST00000504643 RAB14P61106 215 aa4.79□□□□□ -1.64
MATR3-210ENST00000504643 MRPS36P82909 103 aaKnown RBP4.79□□□□□ -1.64
MATR3-210ENST00000504643 RPL18AQ02543 176 aaKnown RBP4.79□□□□□ -1.64
MATR3-210ENST00000504643 SPAG11BQ08648 103 aa4.79□□□□□ -1.64
MATR3-210ENST00000504643 NRACQ8N912 160 aa4.79□□□□□ -1.64
MATR3-210ENST00000504643 A0A1W2PNN7 141 aa4.79□□□□□ -1.64
MATR3-210ENST00000504643 CKS2P33552 79 aa4.79□□□□□ -1.64
MATR3-210ENST00000504643 C5orf38Q86SI9 138 aa4.79□□□□□ -1.64
MATR3-210ENST00000504643 SMDT1Q9H4I9 107 aa4.79□□□□□ -1.64
MATR3-210ENST00000504643 V9GYV3 84 aa4.79□□□□□ -1.64
MATR3-210ENST00000504643 GAS8-AS1O95177 125 aa4.78□□□□□ -1.64
MATR3-210ENST00000504643 SRP19P09132 144 aaKnown RBP4.78□□□□□ -1.64
MATR3-210ENST00000504643 C1orf137Q5JT78 98 aa4.78□□□□□ -1.64
MATR3-210ENST00000504643 HBBP68871 147 aa4.78□□□□□ -1.64
MATR3-210ENST00000504643 IGLV1-50A0A075B6I6 118 aa4.77□□□□□ -1.65
MATR3-210ENST00000504643 TGIF2-C20orf24A0A0A6YYL0 155 aa4.77□□□□□ -1.65
MATR3-210ENST00000504643 SMIM27A0A1W2PRY6 76 aa4.77□□□□□ -1.65
MATR3-210ENST00000504643 MRPL51Q4U2R6 128 aaKnown RBP4.77□□□□□ -1.65
MATR3-210ENST00000504643 ORAOV1Q8WV07 137 aa4.77□□□□□ -1.65
MATR3-210ENST00000504643 NAT8Q9UHE5 227 aa4.77□□□□□ -1.65
MATR3-210ENST00000504643 IGHV3OR16-9A0A0B4J2B5 98 aa4.77□□□□□ -1.65
MATR3-210ENST00000504643 IGLV7-43P04211 117 aa4.77□□□□□ -1.65
MATR3-210ENST00000504643 RAB5AP20339 215 aa4.77□□□□□ -1.65
MATR3-210ENST00000504643 LINC01561Q8N1V8 128 aa4.77□□□□□ -1.65
MATR3-210ENST00000504643 A0A087WZ39 114 aa4.76□□□□□ -1.65
MATR3-210ENST00000504643 TRBV30A0A0K0K1B3 111 aa4.76□□□□□ -1.65
MATR3-210ENST00000504643 SMKR1H3BMG3 65 aa4.76□□□□□ -1.65
MATR3-210ENST00000504643 TNFRSF6BO95407 300 aa4.76□□□□□ -1.65
MATR3-210ENST00000504643 PEA15Q15121 130 aa4.76□□□□□ -1.65
MATR3-210ENST00000504643 Q6ZUT4 128 aa4.76□□□□□ -1.65
MATR3-210ENST00000504643 SMIM2Q9BVW6 85 aa4.76□□□□□ -1.65
MATR3-210ENST00000504643 TNXBP22105 4242 aa4.76□□□□□ -1.65
MATR3-210ENST00000504643 IFI27P40305 119 aaPredicted RBP4.76□□□□□ -1.65
MATR3-210ENST00000504643 RPL13AP40429 203 aaKnown RBP4.76□□□□□ -1.65
MATR3-210ENST00000504643 RPL23P62829 140 aaKnown RBP4.76□□□□□ -1.65
MATR3-210ENST00000504643 PYGO1Q9Y3Y4 419 aa4.76□□□□□ -1.65
MATR3-210ENST00000504643 PCP4L1A6NKN8 68 aa4.75□□□□□ -1.65
MATR3-210ENST00000504643 IFITM10A6NMD0 228 aa4.75□□□□□ -1.65
MATR3-210ENST00000504643 PHF5AQ7RTV0 110 aaKnown RBP4.75□□□□□ -1.65
MATR3-210ENST00000504643 OPRPNQ99935 248 aaPredicted RBP4.75□□□□□ -1.65
MATR3-210ENST00000504643 H0Y9J4 135 aa4.75□□□□□ -1.65
MATR3-210ENST00000504643 ADIRFQ15847 76 aa4.75□□□□□ -1.65
MATR3-210ENST00000504643 RNASE13Q5GAN3 156 aaKnown RBP4.75□□□□□ -1.65
MATR3-210ENST00000504643 PACRGQ96M98 296 aaPredicted RBP4.75□□□□□ -1.65
MATR3-210ENST00000504643 LAMTOR2Q9Y2Q5 125 aa4.75□□□□□ -1.65
MATR3-210ENST00000504643 CARHSP1Q9Y2V2 147 aaKnown RBP4.75□□□□□ -1.65
MATR3-210ENST00000504643 SNAPINO95295 136 aa4.74□□□□□ -1.65
MATR3-210ENST00000504643 NPSP0C0P6 89 aa4.74□□□□□ -1.65
MATR3-210ENST00000504643 G0S2P27469 103 aa4.74□□□□□ -1.65
MATR3-210ENST00000504643 ATP5L2Q7Z4Y8 100 aa4.74□□□□□ -1.65
MATR3-210ENST00000504643 ORMDL3Q8N138 153 aa4.74□□□□□ -1.65
MATR3-210ENST00000504643 LRP2P98164 4655 aa4.74□□□□□ -1.65
MATR3-210ENST00000504643 D6R8Y8 96 aa4.73□□□□□ -1.65
MATR3-210ENST00000504643 K7EMI3 77 aa4.73□□□□□ -1.65
MATR3-210ENST00000504643 UBE2D1P51668 147 aa4.73□□□□□ -1.65
MATR3-210ENST00000504643 UBE2BP63146 152 aa4.73□□□□□ -1.65
MATR3-210ENST00000504643 LINC00518Q8N0U6 118 aa4.73□□□□□ -1.65
MATR3-210ENST00000504643 C2orf88Q9BSF0 95 aa4.73□□□□□ -1.65
MATR3-210ENST00000504643 NDUFC2-KCTD14E9PQ53 114 aa4.73□□□□□ -1.65
MATR3-210ENST00000504643 RPL39P62891 51 aaKnown RBP4.73□□□□□ -1.65
MATR3-210ENST00000504643 SEC11AP67812 179 aa4.73□□□□□ -1.65
MATR3-210ENST00000504643 LBHQ53QV2 105 aaPredicted RBP4.73□□□□□ -1.65
MATR3-210ENST00000504643 PAPPA-AS1Q5QFB9 102 aa4.73□□□□□ -1.65
MATR3-210ENST00000504643 UNQ6190/PRO20217Q6UXQ8 127 aa4.73□□□□□ -1.65
MATR3-210ENST00000504643 Q6ZN92 141 aa4.73□□□□□ -1.65
MATR3-210ENST00000504643 TMEM136Q6ZRR5 245 aa4.73□□□□□ -1.65
MATR3-210ENST00000504643 TMEM141Q96I45 108 aa4.73□□□□□ -1.65
MATR3-210ENST00000504643 NUPR1O60356 82 aa4.72□□□□□ -1.65
MATR3-210ENST00000504643 PRSS2P07478 247 aa4.72□□□□□ -1.65
MATR3-210ENST00000504643 GAGE2EQ4V326 116 aa4.72□□□□□ -1.65
MATR3-210ENST00000504643 TEX43Q6ZNM6 134 aa4.72□□□□□ -1.65
MATR3-210ENST00000504643 C6orf48Q9UBA6 75 aa4.72□□□□□ -1.65
MATR3-210ENST00000504643 GAGE2DQ9UEU5 116 aa4.72□□□□□ -1.65
MATR3-210ENST00000504643 PRR26Q8N8Z3 221 aa4.72□□□□□ -1.65
MATR3-210ENST00000504643 A0A1B0GXF2 115 aa4.71□□□□□ -1.65
MATR3-210ENST00000504643 M0QXV9 152 aa4.71□□□□□ -1.65
MATR3-210ENST00000504643 KIAA0087Q14695 138 aa4.71□□□□□ -1.65
MATR3-210ENST00000504643 FAM19A5Q7Z5A7 132 aaPredicted RBP4.71□□□□□ -1.65
MATR3-210ENST00000504643 PRELID3AQ96N28 172 aa4.71□□□□□ -1.65
MATR3-210ENST00000504643 NPYP01303 97 aa4.71□□□□□ -1.66
MATR3-210ENST00000504643 CKS1BP61024 79 aa4.71□□□□□ -1.66
MATR3-210ENST00000504643 ORMDL2Q53FV1 153 aa4.71□□□□□ -1.66
MATR3-210ENST00000504643 LINC00242Q5T6M2 205 aa4.71□□□□□ -1.66
MATR3-210ENST00000504643 C10orf25Q5T742 122 aa4.71□□□□□ -1.66
MATR3-210ENST00000504643 MRPL54Q6P161 138 aaKnown RBP4.71□□□□□ -1.66
MATR3-210ENST00000504643 FAM104AQ969W3 186 aa4.71□□□□□ -1.66
MATR3-210ENST00000504643 VCX2Q9H322 139 aa4.71□□□□□ -1.66
MATR3-210ENST00000504643 A0A0U1RQV1 116 aa4.7□□□□□ -1.66
MATR3-210ENST00000504643 A4D1N5 150 aa4.7□□□□□ -1.66
MATR3-210ENST00000504643 C6orf226Q5I0X4 101 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms