RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 IGKV2-28A0A075B6P5 120 aa12.03□□□□□ -0.48
PCDHA1-203ENST00000504120 NDUFA7O95182 113 aa12.03□□□□□ -0.48
PCDHA1-203ENST00000504120 IGKV2D-28P01615 120 aa12.03□□□□□ -0.48
PCDHA1-203ENST00000504120 USP17L23D6RBM5 183 aa12.03□□□□□ -0.48
PCDHA1-203ENST00000504120 LINC00526Q96FQ7 95 aa12.02□□□□□ -0.48
PCDHA1-203ENST00000504120 POM121L12Q8N7R1 296 aa12.02□□□□□ -0.49
PCDHA1-203ENST00000504120 LINC00310P59036 64 aa12.02□□□□□ -0.49
PCDHA1-203ENST00000504120 ODF3L2Q3SX64 289 aa12.02□□□□□ -0.49
PCDHA1-203ENST00000504120 BRI3O95415 125 aa12.01□□□□□ -0.49
PCDHA1-203ENST00000504120 HIVEP3Q5T1R4 2406 aa12□□□□□ -0.49
PCDHA1-203ENST00000504120 HCFC1P51610 2035 aa12□□□□□ -0.49
PCDHA1-203ENST00000504120 LOC107984640A0A0U1RRK4 108 aa12□□□□□ -0.49
PCDHA1-203ENST00000504120 C7orf33Q8WU49 177 aa12□□□□□ -0.49
PCDHA1-203ENST00000504120 URB1-AS1Q96HZ7 61 aa12□□□□□ -0.49
PCDHA1-203ENST00000504120 LINC00242Q5T6M2 205 aa11.99□□□□□ -0.49
PCDHA1-203ENST00000504120 LRCOL1A6NCL2 159 aa11.99□□□□□ -0.49
PCDHA1-203ENST00000504120 C3orf84H3BNL1 204 aa11.99□□□□□ -0.49
PCDHA1-203ENST00000504120 COX8CQ7Z4L0 72 aa11.99□□□□□ -0.49
PCDHA1-203ENST00000504120 ZNF73O43830 326 aaPredicted RBP11.99□□□□□ -0.49
PCDHA1-203ENST00000504120 CASC2Q6XLA1 102 aa11.99□□□□□ -0.49
PCDHA1-203ENST00000504120 ZNF706Q9Y5V0 76 aaPredicted RBP11.99□□□□□ -0.49
PCDHA1-203ENST00000504120 EDN2P20800 178 aa11.98□□□□□ -0.49
PCDHA1-203ENST00000504120 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.98□□□□□ -0.49
PCDHA1-203ENST00000504120 WFDC10BQ8IUB3 73 aa11.98□□□□□ -0.49
PCDHA1-203ENST00000504120 ZNF580Q9UK33 172 aa11.98□□□□□ -0.49
PCDHA1-203ENST00000504120 ATG2AQ2TAZ0 1938 aa11.98□□□□□ -0.49
PCDHA1-203ENST00000504120 TLN1Q9Y490 2541 aaKnown RBP11.97□□□□□ -0.49
PCDHA1-203ENST00000504120 BRK1Q8WUW1 75 aa11.97□□□□□ -0.49
PCDHA1-203ENST00000504120 SERP2Q8N6R1 65 aa11.97□□□□□ -0.49
PCDHA1-203ENST00000504120 IGHV4-30-4P0DP06 118 aa11.96□□□□□ -0.49
PCDHA1-203ENST00000504120 MYO18BQ8IUG5 2567 aa11.96□□□□□ -0.49
PCDHA1-203ENST00000504120 TANC2Q9HCD6 1990 aa11.96□□□□□ -0.49
PCDHA1-203ENST00000504120 CCDC168Q8NDH2 2452 aa11.96□□□□□ -0.49
PCDHA1-203ENST00000504120 CYSRT1A8MQ03 144 aa11.96□□□□□ -0.5
PCDHA1-203ENST00000504120 NDUFC1O43677 76 aa11.95□□□□□ -0.5
PCDHA1-203ENST00000504120 IGLV1-51P01701 117 aa11.95□□□□□ -0.5
PCDHA1-203ENST00000504120 CHCHD7Q9BUK0 85 aa11.95□□□□□ -0.5
PCDHA1-203ENST00000504120 PIEZO2Q9H5I5 2752 aa11.95□□□□□ -0.5
PCDHA1-203ENST00000504120 IGLV2-18A0A075B6J9 118 aa11.95□□□□□ -0.5
PCDHA1-203ENST00000504120 COL4A2P08572 1712 aa11.94□□□□□ -0.5
PCDHA1-203ENST00000504120 SMIM1B2RUZ4 78 aa11.94□□□□□ -0.5
PCDHA1-203ENST00000504120 PLA2G2AP14555 144 aa11.94□□□□□ -0.5
PCDHA1-203ENST00000504120 ATP5EP56381 51 aaPredicted RBP11.93□□□□□ -0.5
PCDHA1-203ENST00000504120 FAM19A3Q7Z5A8 133 aa11.93□□□□□ -0.5
PCDHA1-203ENST00000504120 PPDPFQ9H3Y8 114 aa11.93□□□□□ -0.5
PCDHA1-203ENST00000504120 C2CD3Q4AC94 2353 aa11.93□□□□□ -0.5
PCDHA1-203ENST00000504120 NANOS2P60321 138 aaKnown RBP11.93□□□□□ -0.5
PCDHA1-203ENST00000504120 A0A0J9YWU9 116 aa11.92□□□□□ -0.5
PCDHA1-203ENST00000504120 LINC00474Q9P2X8 69 aa11.92□□□□□ -0.5
PCDHA1-203ENST00000504120 NDUFC2-KCTD14E9PQ53 114 aa11.92□□□□□ -0.5
PCDHA1-203ENST00000504120 RPL37AP8A6NKH3 93 aa11.92□□□□□ -0.5
PCDHA1-203ENST00000504120 CPAMD8Q8IZJ3 1885 aa11.91□□□□□ -0.5
PCDHA1-203ENST00000504120 EGFEM1PQ0D2K5 195 aa11.91□□□□□ -0.5
PCDHA1-203ENST00000504120 MPLKIPQ8TAP9 179 aa11.91□□□□□ -0.5
PCDHA1-203ENST00000504120 OXLD1Q5BKU9 147 aa11.91□□□□□ -0.5
PCDHA1-203ENST00000504120 EXPH5Q8NEV8 1989 aa11.91□□□□□ -0.5
PCDHA1-203ENST00000504120 KRTAP10-9P60411 292 aa11.9□□□□□ -0.5
PCDHA1-203ENST00000504120 CSDC2Q9Y534 153 aaKnown RBP11.9□□□□□ -0.5
PCDHA1-203ENST00000504120 Q6JHZ5 121 aa11.9□□□□□ -0.5
PCDHA1-203ENST00000504120 A0A1W2PPR1 153 aa11.89□□□□□ -0.51
PCDHA1-203ENST00000504120 XGP55808 180 aa11.89□□□□□ -0.51
PCDHA1-203ENST00000504120 UNQ6190/PRO20217Q6UXQ8 127 aa11.89□□□□□ -0.51
PCDHA1-203ENST00000504120 AMELXQ99217 191 aa11.88□□□□□ -0.51
PCDHA1-203ENST00000504120 FAM240AA0A1B0GVK7 77 aa11.88□□□□□ -0.51
PCDHA1-203ENST00000504120 C16orf95Q9H693 158 aa11.88□□□□□ -0.51
PCDHA1-203ENST00000504120 RPL28P46779 137 aaKnown RBP11.88□□□□□ -0.51
PCDHA1-203ENST00000504120 M0R2N4 97 aa11.88□□□□□ -0.51
PCDHA1-203ENST00000504120 WFDC13Q8IUB5 93 aa11.88□□□□□ -0.51
PCDHA1-203ENST00000504120 COX7CP15954 63 aa11.88□□□□□ -0.51
PCDHA1-203ENST00000504120 NTM-AS1Q6ZSK4 140 aa11.88□□□□□ -0.51
PCDHA1-203ENST00000504120 WDR87Q6ZQQ6 2873 aa11.87□□□□□ -0.51
PCDHA1-203ENST00000504120 FHL2Q14192 279 aa11.87□□□□□ -0.51
PCDHA1-203ENST00000504120 PLAC8L1A1L4L8 177 aa11.87□□□□□ -0.51
PCDHA1-203ENST00000504120 BEAN1Q3B7T3 259 aa11.87□□□□□ -0.51
PCDHA1-203ENST00000504120 COX6A2Q02221 97 aa11.87□□□□□ -0.51
PCDHA1-203ENST00000504120 V9GYY9 64 aa11.87□□□□□ -0.51
PCDHA1-203ENST00000504120 TSPEAR-AS2P59090 65 aa11.86□□□□□ -0.51
PCDHA1-203ENST00000504120 SPTSSBQ8NFR3 76 aa11.86□□□□□ -0.51
PCDHA1-203ENST00000504120 LINC00694P0DN24 101 aa11.86□□□□□ -0.51
PCDHA1-203ENST00000504120 IGLV4-60A0A075B6I1 120 aa11.85□□□□□ -0.51
PCDHA1-203ENST00000504120 SPINK6Q6UWN8 80 aa11.85□□□□□ -0.51
PCDHA1-203ENST00000504120 SMR3AQ99954 134 aa11.85□□□□□ -0.51
PCDHA1-203ENST00000504120 Q8N814 137 aa11.85□□□□□ -0.51
PCDHA1-203ENST00000504120 SNURFQ9Y675 71 aa11.84□□□□□ -0.51
PCDHA1-203ENST00000504120 ABCA2Q9BZC7 2435 aa11.84□□□□□ -0.51
PCDHA1-203ENST00000504120 ARHGAP32A7KAX9 2087 aa11.84□□□□□ -0.51
PCDHA1-203ENST00000504120 A0A096LNJ9 63 aa11.84□□□□□ -0.51
PCDHA1-203ENST00000504120 Q6Q795 121 aa11.84□□□□□ -0.51
PCDHA1-203ENST00000504120 SVIPQ8NHG7 77 aa11.84□□□□□ -0.51
PCDHA1-203ENST00000504120 EML5Q05BV3 1969 aa11.84□□□□□ -0.51
PCDHA1-203ENST00000504120 MRPL55Q7Z7F7 128 aaKnown RBP11.83□□□□□ -0.52
PCDHA1-203ENST00000504120 PRRC2AP48634 2157 aaKnown RBP11.83□□□□□ -0.52
PCDHA1-203ENST00000504120 TRBV10-3A0A0K0K1G6 114 aa11.82□□□□□ -0.52
PCDHA1-203ENST00000504120 C9orf116Q5BN46 136 aaPredicted RBP11.82□□□□□ -0.52
PCDHA1-203ENST00000504120 HRCT1Q6UXD1 115 aa11.81□□□□□ -0.52
PCDHA1-203ENST00000504120 PRR15LQ9BU68 103 aa11.81□□□□□ -0.52
PCDHA1-203ENST00000504120 IGLV9-49A0A0B4J1Y8 123 aa11.81□□□□□ -0.52
PCDHA1-203ENST00000504120 M0QXV9 152 aa11.8□□□□□ -0.52
PCDHA1-203ENST00000504120 ADAMTSL4-AS1Q5T5F5 129 aa11.8□□□□□ -0.52
PCDHA1-203ENST00000504120 LY6G6CO95867 125 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms