RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 DAND5Q8N907 189 aa11.72□□□□□ -0.53
VCAN-204ENST00000502527 COPS9Q8WXC6 57 aa11.72□□□□□ -0.53
VCAN-204ENST00000502527 F5H768 121 aa11.72□□□□□ -0.53
VCAN-204ENST00000502527 PF4P02776 101 aa11.72□□□□□ -0.53
VCAN-204ENST00000502527 SCGB1A1P11684 91 aa11.72□□□□□ -0.53
VCAN-204ENST00000502527 LINC01620Q4KN68 170 aa11.72□□□□□ -0.53
VCAN-204ENST00000502527 JMJD1CQ15652 2540 aa11.72□□□□□ -0.53
VCAN-204ENST00000502527 FHL2Q14192 279 aa11.71□□□□□ -0.53
VCAN-204ENST00000502527 ITPR2Q14571 2701 aa11.71□□□□□ -0.53
VCAN-204ENST00000502527 LINC00308Q8TCZ7 52 aa11.71□□□□□ -0.54
VCAN-204ENST00000502527 PRIMA1Q86XR5 153 aa11.7□□□□□ -0.54
VCAN-204ENST00000502527 ZNF625Q96I27 306 aaPredicted RBP11.7□□□□□ -0.54
VCAN-204ENST00000502527 RPL13AP40429 203 aaKnown RBP11.69□□□□□ -0.54
VCAN-204ENST00000502527 KRTAP10-3P60369 221 aa11.69□□□□□ -0.54
VCAN-204ENST00000502527 HERV-K104P63124 156 aa11.69□□□□□ -0.54
VCAN-204ENST00000502527 SMR3AQ99954 134 aa11.69□□□□□ -0.54
VCAN-204ENST00000502527 UNC79Q9P2D8 2635 aa11.69□□□□□ -0.54
VCAN-204ENST00000502527 LINC00482Q8N8I6 264 aa11.69□□□□□ -0.54
VCAN-204ENST00000502527 LINC01600Q96MT4 127 aa11.69□□□□□ -0.54
VCAN-204ENST00000502527 NOTCH3Q9UM47 2321 aa11.68□□□□□ -0.54
VCAN-204ENST00000502527 TRBV6-8A0A0A6YYG3 113 aa11.68□□□□□ -0.54
VCAN-204ENST00000502527 TRBV10-2A0A0K0K1G8 114 aa11.67□□□□□ -0.54
VCAN-204ENST00000502527 GAGE6Q13070 117 aa11.67□□□□□ -0.54
VCAN-204ENST00000502527 MEIG1Q5JSS6 88 aa11.67□□□□□ -0.54
VCAN-204ENST00000502527 KIR2DL5BQ8NHK3 375 aa11.67□□□□□ -0.54
VCAN-204ENST00000502527 CDIP1Q9H305 208 aa11.67□□□□□ -0.54
VCAN-204ENST00000502527 A0A0U1RRA0 63 aa11.66□□□□□ -0.54
VCAN-204ENST00000502527 CHCHD5Q9BSY4 110 aa11.66□□□□□ -0.54
VCAN-204ENST00000502527 HELZ2Q9BYK8 2649 aaKnown RBP11.65□□□□□ -0.54
VCAN-204ENST00000502527 CRLF1O75462 422 aa11.65□□□□□ -0.54
VCAN-204ENST00000502527 DEFB130BP0DP73 79 aa11.65□□□□□ -0.54
VCAN-204ENST00000502527 DEFB130AP0DP74 79 aa11.65□□□□□ -0.54
VCAN-204ENST00000502527 LINC00612Q8N6U2 182 aa11.64□□□□□ -0.55
VCAN-204ENST00000502527 HIVEP2P31629 2446 aa11.64□□□□□ -0.55
VCAN-204ENST00000502527 LY6G6DO95868 133 aa11.64□□□□□ -0.55
VCAN-204ENST00000502527 PPDPFQ9H3Y8 114 aa11.64□□□□□ -0.55
VCAN-204ENST00000502527 TMEM262E9PQX1 116 aa11.63□□□□□ -0.55
VCAN-204ENST00000502527 LST1O00453 97 aa11.63□□□□□ -0.55
VCAN-204ENST00000502527 C2CD3Q4AC94 2353 aa11.63□□□□□ -0.55
VCAN-204ENST00000502527 IGLV4-60A0A075B6I1 120 aa11.63□□□□□ -0.55
VCAN-204ENST00000502527 SOSTDC1Q6X4U4 206 aa11.63□□□□□ -0.55
VCAN-204ENST00000502527 COX7B2Q8TF08 81 aa11.63□□□□□ -0.55
VCAN-204ENST00000502527 NTN5Q8WTR8 489 aaPredicted RBP11.63□□□□□ -0.55
VCAN-204ENST00000502527 SMIM9A6NGZ8 99 aa11.62□□□□□ -0.55
VCAN-204ENST00000502527 CLEC2BQ92478 149 aa11.62□□□□□ -0.55
VCAN-204ENST00000502527 IGKV3OR2-268A0A0C4DH90 116 aa11.61□□□□□ -0.55
VCAN-204ENST00000502527 C2orf82Q6UX34 121 aa11.61□□□□□ -0.55
VCAN-204ENST00000502527 KMT2BQ9UMN6 2715 aaPredicted RBP11.61□□□□□ -0.55
VCAN-204ENST00000502527 H3BT86 120 aa11.61□□□□□ -0.55
VCAN-204ENST00000502527 X6R8D5 127 aa11.61□□□□□ -0.55
VCAN-204ENST00000502527 IGHV3OR16-9A0A0B4J2B5 98 aa11.59□□□□□ -0.55
VCAN-204ENST00000502527 GYPEP15421 78 aa11.59□□□□□ -0.55
VCAN-204ENST00000502527 C9orf66Q5T8R8 295 aa11.59□□□□□ -0.55
VCAN-204ENST00000502527 TOMM7Q9P0U1 55 aa11.58□□□□□ -0.56
VCAN-204ENST00000502527 FASNP49327 2511 aaKnown RBP11.58□□□□□ -0.56
VCAN-204ENST00000502527 XGP55808 180 aa11.58□□□□□ -0.56
VCAN-204ENST00000502527 SHISA2Q6UWI4 295 aa11.58□□□□□ -0.56
VCAN-204ENST00000502527 UBE2WQ96B02 151 aa11.58□□□□□ -0.56
VCAN-204ENST00000502527 A0A087WZ39 114 aa11.57□□□□□ -0.56
VCAN-204ENST00000502527 TEX49A0A1B0GTD5 131 aa11.57□□□□□ -0.56
VCAN-204ENST00000502527 PRO0255Q9UI72 69 aa11.57□□□□□ -0.56
VCAN-204ENST00000502527 COX7A2LO14548 114 aa11.56□□□□□ -0.56
VCAN-204ENST00000502527 MT-ATP8P03928 68 aa11.56□□□□□ -0.56
VCAN-204ENST00000502527 LINC00959A0A1B0GUT2 108 aa11.56□□□□□ -0.56
VCAN-204ENST00000502527 A0A1B0GUV1 79 aa11.55□□□□□ -0.56
VCAN-204ENST00000502527 LYRM9A8MSI8 78 aa11.55□□□□□ -0.56
VCAN-204ENST00000502527 TRAV13-2A0A0B4J235 113 aa11.54□□□□□ -0.56
VCAN-204ENST00000502527 FAM222AQ5U5X8 452 aa11.54□□□□□ -0.56
VCAN-204ENST00000502527 MIR7-3HGQ8N6C7 128 aa11.54□□□□□ -0.56
VCAN-204ENST00000502527 C5orf38Q86SI9 138 aa11.53□□□□□ -0.56
VCAN-204ENST00000502527 IBA57-AS1B1ANH7 110 aa11.53□□□□□ -0.56
VCAN-204ENST00000502527 INAFM1C9JVW0 142 aa11.53□□□□□ -0.56
VCAN-204ENST00000502527 LINC00158P58513 81 aa11.53□□□□□ -0.56
VCAN-204ENST00000502527 TRAV8-4A0A0B4J246 113 aa11.52□□□□□ -0.57
VCAN-204ENST00000502527 PAX4O43316 350 aa11.52□□□□□ -0.57
VCAN-204ENST00000502527 SS18Q15532 418 aa11.52□□□□□ -0.57
VCAN-204ENST00000502527 SPATA3Q8NHX4 192 aa11.52□□□□□ -0.57
VCAN-204ENST00000502527 APOC4P55056 127 aa11.51□□□□□ -0.57
VCAN-204ENST00000502527 CRPP02741 224 aa11.51□□□□□ -0.57
VCAN-204ENST00000502527 SND1-IT1Q9HBX3 110 aa11.51□□□□□ -0.57
VCAN-204ENST00000502527 TRACP01848 142 aa11.5□□□□□ -0.57
VCAN-204ENST00000502527 DEFB135Q30KP9 77 aa11.5□□□□□ -0.57
VCAN-204ENST00000502527 DEFB121Q5J5C9 76 aa11.49□□□□□ -0.57
VCAN-204ENST00000502527 A0A096LPF7 62 aa11.48□□□□□ -0.57
VCAN-204ENST00000502527 XCL1P47992 114 aa11.48□□□□□ -0.57
VCAN-204ENST00000502527 C6orf226Q5I0X4 101 aa11.48□□□□□ -0.57
VCAN-204ENST00000502527 A0A1B0GV72 72 aa11.48□□□□□ -0.57
VCAN-204ENST00000502527 RPL28P46779 137 aaKnown RBP11.48□□□□□ -0.57
VCAN-204ENST00000502527 IGKV2-28A0A075B6P5 120 aa11.47□□□□□ -0.57
VCAN-204ENST00000502527 IGKV2D-28P01615 120 aa11.47□□□□□ -0.57
VCAN-204ENST00000502527 CCL18P55774 89 aa11.47□□□□□ -0.57
VCAN-204ENST00000502527 LINC01561Q8N1V8 128 aa11.47□□□□□ -0.57
VCAN-204ENST00000502527 LINC00337Q8N6G1 96 aa11.47□□□□□ -0.57
VCAN-204ENST00000502527 IGHV4-28A0A0C4DH34 117 aa11.47□□□□□ -0.57
VCAN-204ENST00000502527 DEFB4AO15263 64 aa11.46□□□□□ -0.57
VCAN-204ENST00000502527 PFN2P35080 140 aa11.46□□□□□ -0.57
VCAN-204ENST00000502527 DAD1P61803 113 aa11.46□□□□□ -0.57
VCAN-204ENST00000502527 GCN1Q92616 2671 aaKnown RBP11.46□□□□□ -0.58
VCAN-204ENST00000502527 HECTD1Q9ULT8 2610 aa11.45□□□□□ -0.58
VCAN-204ENST00000502527 Q8IZM0 81 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms