RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 LINC01561Q8N1V8 128 aa8.36□□□□□ -1.07
SNRNP200-208ENST00000497539 C11orf72Q8NBR9 251 aa8.36□□□□□ -1.07
SNRNP200-208ENST00000497539 TEX49A0A1B0GTD5 131 aa8.36□□□□□ -1.07
SNRNP200-208ENST00000497539 NDUFC2O95298 119 aa8.36□□□□□ -1.07
SNRNP200-208ENST00000497539 ACYP1P07311 99 aa8.36□□□□□ -1.07
SNRNP200-208ENST00000497539 CD164Q04900 197 aa8.36□□□□□ -1.07
SNRNP200-208ENST00000497539 ZNF876PQ49A33 203 aa8.36□□□□□ -1.07
SNRNP200-208ENST00000497539 MUSTN1Q8IVN3 82 aa8.36□□□□□ -1.07
SNRNP200-208ENST00000497539 UBE2WQ96B02 151 aa8.36□□□□□ -1.07
SNRNP200-208ENST00000497539 SETXQ7Z333 2677 aaKnown RBP8.35□□□□□ -1.07
SNRNP200-208ENST00000497539 HIST2H2BDQ6DRA6 164 aa8.35□□□□□ -1.07
SNRNP200-208ENST00000497539 C11orf44Q8N8P7 122 aa8.35□□□□□ -1.07
SNRNP200-208ENST00000497539 P0DMU3 169 aa8.35□□□□□ -1.07
SNRNP200-208ENST00000497539 FAM231AP0DMU4 169 aa8.35□□□□□ -1.07
SNRNP200-208ENST00000497539 FAM231CP0DMU5 169 aa8.35□□□□□ -1.07
SNRNP200-208ENST00000497539 KRTAP10-3P60369 221 aa8.35□□□□□ -1.07
SNRNP200-208ENST00000497539 Q1RN00 199 aa8.35□□□□□ -1.07
SNRNP200-208ENST00000497539 PAPPA-AS1Q5QFB9 102 aa8.35□□□□□ -1.07
SNRNP200-208ENST00000497539 A0A0J9YXV3 536 aa8.34□□□□□ -1.07
SNRNP200-208ENST00000497539 LINC00643Q86TS7 51 aa8.34□□□□□ -1.07
SNRNP200-208ENST00000497539 LINC00482Q8N8I6 264 aa8.34□□□□□ -1.07
SNRNP200-208ENST00000497539 TMEM141Q96I45 108 aa8.34□□□□□ -1.07
SNRNP200-208ENST00000497539 C19orf73Q9NVV2 129 aa8.34□□□□□ -1.07
SNRNP200-208ENST00000497539 IGHV3-33P01772 117 aa8.34□□□□□ -1.07
SNRNP200-208ENST00000497539 RHOHQ15669 191 aa8.34□□□□□ -1.07
SNRNP200-208ENST00000497539 STHQ8IWL8 128 aa8.34□□□□□ -1.07
SNRNP200-208ENST00000497539 C1orf158Q8N1D5 194 aa8.34□□□□□ -1.07
SNRNP200-208ENST00000497539 TRBV10-2A0A0K0K1G8 114 aa8.33□□□□□ -1.08
SNRNP200-208ENST00000497539 PMAIP1Q13794 54 aa8.33□□□□□ -1.08
SNRNP200-208ENST00000497539 NSUN5P1Q3KNT7 163 aa8.33□□□□□ -1.08
SNRNP200-208ENST00000497539 LINC01620Q4KN68 170 aa8.33□□□□□ -1.08
SNRNP200-208ENST00000497539 TIMM17AQ99595 171 aa8.33□□□□□ -1.08
SNRNP200-208ENST00000497539 NPC2P61916 151 aa8.33□□□□□ -1.08
SNRNP200-208ENST00000497539 RNASE13Q5GAN3 156 aaKnown RBP8.33□□□□□ -1.08
SNRNP200-208ENST00000497539 SDIM1Q6ZPB5 146 aa8.33□□□□□ -1.08
SNRNP200-208ENST00000497539 TMEM263Q8WUH6 116 aaKnown RBP8.33□□□□□ -1.08
SNRNP200-208ENST00000497539 PRSS2P07478 247 aa8.32□□□□□ -1.08
SNRNP200-208ENST00000497539 IGHV3-73A0A0B4J1V6 119 aa8.32□□□□□ -1.08
SNRNP200-208ENST00000497539 TMEM223A0PJW6 202 aa8.32□□□□□ -1.08
SNRNP200-208ENST00000497539 HTN1P15515 57 aa8.31□□□□□ -1.08
SNRNP200-208ENST00000497539 ZNF22P17026 224 aaPredicted RBP8.31□□□□□ -1.08
SNRNP200-208ENST00000497539 SERP1Q9Y6X1 66 aa8.31□□□□□ -1.08
SNRNP200-208ENST00000497539 ITPR2Q14571 2701 aa8.31□□□□□ -1.08
SNRNP200-208ENST00000497539 TRAV8-3A0A0A6YYJ7 113 aa8.3□□□□□ -1.08
SNRNP200-208ENST00000497539 A0A0U1RQV1 116 aa8.3□□□□□ -1.08
SNRNP200-208ENST00000497539 LEPROTO15243 131 aa8.3□□□□□ -1.08
SNRNP200-208ENST00000497539 SERP2Q8N6R1 65 aa8.3□□□□□ -1.08
SNRNP200-208ENST00000497539 INAFM1C9JVW0 142 aa8.3□□□□□ -1.08
SNRNP200-208ENST00000497539 PRM2P04554 102 aa8.29□□□□□ -1.08
SNRNP200-208ENST00000497539 GIG44P09565 113 aaPredicted RBP8.29□□□□□ -1.08
SNRNP200-208ENST00000497539 SMIM26A0A096LP01 95 aa8.29□□□□□ -1.08
SNRNP200-208ENST00000497539 I3L3M4 83 aa8.29□□□□□ -1.08
SNRNP200-208ENST00000497539 ATXN8Q156A1 80 aa8.29□□□□□ -1.08
SNRNP200-208ENST00000497539 CCDC168Q8NDH2 2452 aa8.29□□□□□ -1.08
SNRNP200-208ENST00000497539 Q9UF83 564 aa8.28□□□□□ -1.08
SNRNP200-208ENST00000497539 NOTCH2Q04721 2471 aa8.28□□□□□ -1.08
SNRNP200-208ENST00000497539 A0A0J9YXY3 114 aa8.28□□□□□ -1.08
SNRNP200-208ENST00000497539 H3BT86 120 aa8.28□□□□□ -1.08
SNRNP200-208ENST00000497539 TRIAP1O43715 76 aa8.28□□□□□ -1.08
SNRNP200-208ENST00000497539 IGHV3-53P01767 116 aa8.28□□□□□ -1.08
SNRNP200-208ENST00000497539 ADAMTSL4-AS1Q5T5F5 129 aa8.28□□□□□ -1.08
SNRNP200-208ENST00000497539 C20orf203Q8NBC4 194 aa8.28□□□□□ -1.08
SNRNP200-208ENST00000497539 IGLV4-3A0A075B6K6 122 aa8.27□□□□□ -1.08
SNRNP200-208ENST00000497539 XCL2Q9UBD3 114 aa8.27□□□□□ -1.08
SNRNP200-208ENST00000497539 MYO9AB2RTY4 2548 aa8.27□□□□□ -1.09
SNRNP200-208ENST00000497539 IGHV3-30-3P0DP02 117 aa8.27□□□□□ -1.09
SNRNP200-208ENST00000497539 DAZ2Q13117 558 aaKnown RBP8.27□□□□□ -1.09
SNRNP200-208ENST00000497539 CSNK1G2-AS1Q8NCQ2 148 aa8.27□□□□□ -1.09
SNRNP200-208ENST00000497539 PF4P02776 101 aa8.26□□□□□ -1.09
SNRNP200-208ENST00000497539 TLN2Q9Y4G6 2542 aa8.26□□□□□ -1.09
SNRNP200-208ENST00000497539 SONP18583 2426 aaKnown RBP8.26□□□□□ -1.09
SNRNP200-208ENST00000497539 RPL18AQ02543 176 aaKnown RBP8.26□□□□□ -1.09
SNRNP200-208ENST00000497539 BRK1Q8WUW1 75 aa8.26□□□□□ -1.09
SNRNP200-208ENST00000497539 NACAE9PAV3 2078 aa8.26□□□□□ -1.09
SNRNP200-208ENST00000497539 A0A0B4J2C4 111 aa8.26□□□□□ -1.09
SNRNP200-208ENST00000497539 DAND5Q8N907 189 aa8.26□□□□□ -1.09
SNRNP200-208ENST00000497539 CLEC2BQ92478 149 aa8.26□□□□□ -1.09
SNRNP200-208ENST00000497539 FP248Q71RG6 208 aaPredicted RBP8.25□□□□□ -1.09
SNRNP200-208ENST00000497539 C16orf74Q96GX8 76 aa8.25□□□□□ -1.09
SNRNP200-208ENST00000497539 CYSRT1A8MQ03 144 aa8.25□□□□□ -1.09
SNRNP200-208ENST00000497539 OVOL2Q9BRP0 275 aa8.25□□□□□ -1.09
SNRNP200-208ENST00000497539 TIMM21Q9BVV7 248 aa8.25□□□□□ -1.09
SNRNP200-208ENST00000497539 PLAC8L1A1L4L8 177 aa8.24□□□□□ -1.09
SNRNP200-208ENST00000497539 FAM104AQ969W3 186 aa8.24□□□□□ -1.09
SNRNP200-208ENST00000497539 LITAFQ99732 161 aa8.24□□□□□ -1.09
SNRNP200-208ENST00000497539 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.24□□□□□ -1.09
SNRNP200-208ENST00000497539 C9orf66Q5T8R8 295 aa8.24□□□□□ -1.09
SNRNP200-208ENST00000497539 C2orf82Q6UX34 121 aa8.24□□□□□ -1.09
SNRNP200-208ENST00000497539 Q6ZSN1 163 aa8.24□□□□□ -1.09
SNRNP200-208ENST00000497539 SMCR5Q8TEV8 140 aa8.23□□□□□ -1.09
SNRNP200-208ENST00000497539 NOTCH3Q9UM47 2321 aa8.23□□□□□ -1.09
SNRNP200-208ENST00000497539 TRBV10-1A0A0K0K1A3 114 aa8.23□□□□□ -1.09
SNRNP200-208ENST00000497539 NDUFA12Q9UI09 145 aa8.23□□□□□ -1.09
SNRNP200-208ENST00000497539 OTOGQ6ZRI0 2925 aa8.23□□□□□ -1.09
SNRNP200-208ENST00000497539 ACANP16112 2415 aa8.22□□□□□ -1.09
SNRNP200-208ENST00000497539 C2CD3Q4AC94 2353 aa8.22□□□□□ -1.09
SNRNP200-208ENST00000497539 HIVEP2P31629 2446 aa8.22□□□□□ -1.09
SNRNP200-208ENST00000497539 H7C423 109 aa8.22□□□□□ -1.09
SNRNP200-208ENST00000497539 Q6ZRU5 148 aa8.22□□□□□ -1.09
SNRNP200-208ENST00000497539 ICOSQ9Y6W8 199 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms